RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 WASP42768 502 aa13.69□□□□□ -0.22
RABGGTA-213ENST00000560127 CYP4F3Q08477 520 aa13.69□□□□□ -0.22
RABGGTA-213ENST00000560127 DENND5BQ6ZUT9 1274 aa13.69□□□□□ -0.22
RABGGTA-213ENST00000560127 TRMT11Q7Z4G4 463 aaKnown RBP13.69□□□□□ -0.22
RABGGTA-213ENST00000560127 NT5DC4Q86YG4 428 aa13.69□□□□□ -0.22
RABGGTA-213ENST00000560127 SCUBE3Q8IX30 993 aa13.69□□□□□ -0.22
RABGGTA-213ENST00000560127 ETFBKMTQ8IXQ9 262 aa13.69□□□□□ -0.22
RABGGTA-213ENST00000560127 RGL4Q8IZJ4 473 aa13.69□□□□□ -0.22
RABGGTA-213ENST00000560127 C1orf127Q8N9H9 656 aa13.69□□□□□ -0.22
RABGGTA-213ENST00000560127 CXorf38Q8TB03 319 aa13.69□□□□□ -0.22
RABGGTA-213ENST00000560127 FAM84AQ96KN4 292 aa13.69□□□□□ -0.22
RABGGTA-213ENST00000560127 UBL7Q96S82 380 aaPredicted RBP13.69□□□□□ -0.22
RABGGTA-213ENST00000560127 TTLL2Q9BWV7 592 aa13.69□□□□□ -0.22
RABGGTA-213ENST00000560127 FAM124BQ9H5Z6 455 aaPredicted RBP13.69□□□□□ -0.22
RABGGTA-213ENST00000560127 PARVGQ9HBI0 331 aa13.69□□□□□ -0.22
RABGGTA-213ENST00000560127 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.69□□□□□ -0.22
RABGGTA-213ENST00000560127 SUSD2Q9UGT4 822 aa13.69□□□□□ -0.22
RABGGTA-213ENST00000560127 CKAP5Q14008 2032 aa13.68□□□□□ -0.22
RABGGTA-213ENST00000560127 TRABD2BA6NFA1 517 aa13.68□□□□□ -0.22
RABGGTA-213ENST00000560127 CYSRT1A8MQ03 144 aa13.68□□□□□ -0.22
RABGGTA-213ENST00000560127 TULP3O75386 442 aa13.68□□□□□ -0.22
RABGGTA-213ENST00000560127 FAM13AO94988 1023 aa13.68□□□□□ -0.22
RABGGTA-213ENST00000560127 IL18RAPO95256 599 aa13.68□□□□□ -0.22
RABGGTA-213ENST00000560127 OAS1P00973 400 aaKnown RBP13.68□□□□□ -0.22
RABGGTA-213ENST00000560127 BDNFP23560 247 aa13.68□□□□□ -0.22
RABGGTA-213ENST00000560127 ADSSP30520 456 aa13.68□□□□□ -0.22
RABGGTA-213ENST00000560127 LHX1P48742 406 aa13.68□□□□□ -0.22
RABGGTA-213ENST00000560127 SLFN12LQ6IEE8 588 aa13.68□□□□□ -0.22
RABGGTA-213ENST00000560127 GPBP1Q86WP2 473 aa13.68□□□□□ -0.22
RABGGTA-213ENST00000560127 ADGRF2Q8IZF7 708 aa13.68□□□□□ -0.22
RABGGTA-213ENST00000560127 TOP6BLQ8N6T0 577 aa13.68□□□□□ -0.22
RABGGTA-213ENST00000560127 NAT16Q8N8M0 369 aa13.68□□□□□ -0.22
RABGGTA-213ENST00000560127 SPRYD3Q8NCJ5 442 aa13.68□□□□□ -0.22
RABGGTA-213ENST00000560127 BAHD1Q8TBE0 780 aaPredicted RBP13.68□□□□□ -0.22
RABGGTA-213ENST00000560127 SETD7Q8WTS6 366 aaKnown RBP13.68□□□□□ -0.22
RABGGTA-213ENST00000560127 MYLPFQ96A32 169 aa13.68□□□□□ -0.22
RABGGTA-213ENST00000560127 ERLEC1Q96DZ1 483 aa13.68□□□□□ -0.22
RABGGTA-213ENST00000560127 CEP295NLQ96MC4 621 aa13.68□□□□□ -0.22
RABGGTA-213ENST00000560127 ZDHHC5Q9C0B5 715 aa13.68□□□□□ -0.22
RABGGTA-213ENST00000560127 GDAP2Q9NXN4 497 aa13.68□□□□□ -0.22
RABGGTA-213ENST00000560127 MAGEC2Q9UBF1 373 aaPredicted RBP13.68□□□□□ -0.22
RABGGTA-213ENST00000560127 SNX9Q9Y5X1 595 aa13.68□□□□□ -0.22
RABGGTA-213ENST00000560127 PTPN13Q12923 2485 aa13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 TRIM24O15164 1050 aa13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 ATXN1LP0C7T5 689 aaKnown RBP13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 GNSP15586 552 aa13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 PLCG1P19174 1290 aa13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 PCSK1P29120 753 aa13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 NTSR1P30989 418 aa13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 GRIK1P39086 918 aa13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 NEK4P51957 841 aa13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 PSMC1P62191 440 aaKnown RBP13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 TFAMQ00059 246 aaKnown RBP13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 GAD2Q05329 585 aa13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 CAMK2BQ13554 666 aa13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 SOWAHAQ2M3V2 549 aa13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 C10orf76Q5T2E6 689 aa13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 EGFLAMQ63HQ2 1017 aa13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 VSTM1Q6UX27 236 aa13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 C4orf50Q6ZRC1 276 aa13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 CCDC83Q8IWF9 413 aa13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 LRRC52Q8N7C0 313 aa13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 TERB1Q8NA31 727 aa13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 IPO4Q8TEX9 1081 aaKnown RBP13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 SLC39A7Q92504 469 aa13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 CDK5RAP3Q96JB5 506 aa13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 ACOX2Q99424 681 aa13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 SYT15Q9BQS2 421 aa13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 SLC6A17Q9H1V8 727 aa13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 IL21RQ9HBE5 538 aa13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 CRTAC1Q9NQ79 661 aa13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 TBC1D14Q9P2M4 693 aa13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 DEC1Q9P2X7 70 aa13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 STARD13Q9Y3M8 1113 aa13.67□□□□□ -0.22
RABGGTA-213ENST00000560127 HOXC11O43248 304 aaPredicted RBP13.66□□□□□ -0.22
RABGGTA-213ENST00000560127 NDUFS2O75306 463 aa13.66□□□□□ -0.22
RABGGTA-213ENST00000560127 ABL1P00519 1130 aa13.66□□□□□ -0.22
RABGGTA-213ENST00000560127 MBL2P11226 248 aaPredicted RBP13.66□□□□□ -0.22
RABGGTA-213ENST00000560127 LMO2P25791 158 aa13.66□□□□□ -0.22
RABGGTA-213ENST00000560127 PPP3CCP48454 512 aa13.66□□□□□ -0.22
RABGGTA-213ENST00000560127 NOP14P78316 857 aaKnown RBP13.66□□□□□ -0.22
RABGGTA-213ENST00000560127 DHX8Q14562 1220 aaKnown RBP13.66□□□□□ -0.22
RABGGTA-213ENST00000560127 WDR45BQ5MNZ6 344 aa13.66□□□□□ -0.22
RABGGTA-213ENST00000560127 SYCP2LQ5T4T6 812 aa13.66□□□□□ -0.22
RABGGTA-213ENST00000560127 DDX42Q86XP3 938 aaKnown RBP eCLIP13.66□□□□□ -0.22
RABGGTA-213ENST00000560127 ZSWIM2Q8NEG5 633 aa13.66□□□□□ -0.22
RABGGTA-213ENST00000560127 KBTBD7Q8WVZ9 684 aa13.66□□□□□ -0.22
RABGGTA-213ENST00000560127 DNASE2BQ8WZ79 361 aa13.66□□□□□ -0.22
RABGGTA-213ENST00000560127 POMGNT1Q8WZA1 660 aa13.66□□□□□ -0.22
RABGGTA-213ENST00000560127 FOXJ1Q92949 421 aa13.66□□□□□ -0.22
RABGGTA-213ENST00000560127 ZFRQ96KR1 1074 aaKnown RBP13.66□□□□□ -0.22
RABGGTA-213ENST00000560127 LLPHQ9BRT6 129 aaKnown RBP13.66□□□□□ -0.22
RABGGTA-213ENST00000560127 ZHX3Q9H4I2 956 aa13.66□□□□□ -0.22
RABGGTA-213ENST00000560127 SIX4Q9UIU6 781 aa13.66□□□□□ -0.22
RABGGTA-213ENST00000560127 ARID1BQ8NFD5 2236 aaPredicted RBP13.66□□□□□ -0.22
RABGGTA-213ENST00000560127 A0A1B0GTW7 788 aa13.65□□□□□ -0.22
RABGGTA-213ENST00000560127 E2F8A0AVK6 867 aa13.65□□□□□ -0.22
RABGGTA-213ENST00000560127 VWA3AA6NCI4 1184 aa13.65□□□□□ -0.22
RABGGTA-213ENST00000560127 TK2O00142 265 aa13.65□□□□□ -0.22
RABGGTA-213ENST00000560127 CILPO75339 1184 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms