RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 TNK2Q07912 1038 aa9.02□□□□□ -0.97
USP3-217ENST00000560070 BST2Q10589 180 aaKnown RBP9.02□□□□□ -0.97
USP3-217ENST00000560070 HECTD3Q5T447 861 aa9.02□□□□□ -0.97
USP3-217ENST00000560070 TRIM68Q6AZZ1 485 aa9.02□□□□□ -0.97
USP3-217ENST00000560070 DPY19L2P1Q6NXN4 242 aa9.02□□□□□ -0.97
USP3-217ENST00000560070 LCLAT1Q6UWP7 414 aa9.02□□□□□ -0.97
USP3-217ENST00000560070 HFE2Q6ZVN8 426 aa9.02□□□□□ -0.97
USP3-217ENST00000560070 ENOSF1Q7L5Y1 443 aa9.02□□□□□ -0.97
USP3-217ENST00000560070 SCD5Q86SK9 330 aa9.02□□□□□ -0.97
USP3-217ENST00000560070 PASD1Q8IV76 773 aa9.02□□□□□ -0.97
USP3-217ENST00000560070 CELF5Q8N6W0 485 aaKnown RBP9.02□□□□□ -0.97
USP3-217ENST00000560070 RIN3Q8TB24 985 aa9.02□□□□□ -0.97
USP3-217ENST00000560070 BPIFB1Q8TDL5 484 aa9.02□□□□□ -0.97
USP3-217ENST00000560070 SH3RF2Q8TEC5 729 aa9.02□□□□□ -0.97
USP3-217ENST00000560070 ASIC4Q96FT7 647 aa9.02□□□□□ -0.97
USP3-217ENST00000560070 NAP1L5Q96NT1 182 aaPredicted RBP9.02□□□□□ -0.97
USP3-217ENST00000560070 BPIFA3Q9BQP9 254 aa9.02□□□□□ -0.97
USP3-217ENST00000560070 ULBP1Q9BZM6 244 aa9.02□□□□□ -0.97
USP3-217ENST00000560070 PDCL3Q9H2J4 239 aa9.02□□□□□ -0.97
USP3-217ENST00000560070 LINC00597Q9H2U6 94 aa9.02□□□□□ -0.97
USP3-217ENST00000560070 FBXO44Q9H4M3 255 aa9.02□□□□□ -0.97
USP3-217ENST00000560070 NMUR1Q9HB89 426 aa9.02□□□□□ -0.97
USP3-217ENST00000560070 TRPV4Q9HBA0 871 aa9.02□□□□□ -0.97
USP3-217ENST00000560070 LRRC4Q9HBW1 653 aa9.02□□□□□ -0.97
USP3-217ENST00000560070 C11orf16Q9NQ32 467 aa9.02□□□□□ -0.97
USP3-217ENST00000560070 PLCB1Q9NQ66 1216 aa9.02□□□□□ -0.97
USP3-217ENST00000560070 ST7Q9NRC1 585 aa9.02□□□□□ -0.97
USP3-217ENST00000560070 HEBP1Q9NRV9 189 aa9.02□□□□□ -0.97
USP3-217ENST00000560070 THG1LQ9NWX6 298 aaKnown RBP9.02□□□□□ -0.97
USP3-217ENST00000560070 OSER1Q9NX31 292 aa9.02□□□□□ -0.97
USP3-217ENST00000560070 IL37Q9NZH6 218 aa9.02□□□□□ -0.97
USP3-217ENST00000560070 NAGPAQ9UK23 515 aa9.02□□□□□ -0.97
USP3-217ENST00000560070 CPQQ9Y646 472 aa9.02□□□□□ -0.97
USP3-217ENST00000560070 LRRC10BA6NIK2 292 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 LGALS16A8MUM7 142 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 GOLGA6L19H0YKK7 550 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 LEFTY2O00292 366 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 XPO1O14980 1071 aaKnown RBP9.01□□□□□ -0.97
USP3-217ENST00000560070 EPHB6O15197 1021 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 COCHO43405 550 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 MED7O43513 233 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 PI15O43692 258 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 GPR37L1O60883 481 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 GFPT2O94808 682 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 ZBED1O96006 694 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 RARGP13631 454 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 ARSAP15289 507 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 UCHL3P15374 230 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 CLCN1P35523 988 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 KRT9P35527 623 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 SOX9P48436 509 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 PPP3CCP48454 512 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 ZNF132P52740 706 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 BCAT1P54687 386 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 TPM4P67936 248 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 ZXDBP98169 803 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 PTK2Q05397 1052 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 FILIP1LQ4L180 1135 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 TAF3Q5VWG9 929 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 PMF1Q6P1K2 205 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 CC2D1AQ6P1N0 951 aaPredicted RBP9.01□□□□□ -0.97
USP3-217ENST00000560070 SLC47A2Q86VL8 602 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 PDZD8Q8NEN9 1154 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 NEK11Q8NG66 645 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 CSGALNACT1Q8TDX6 532 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 ZNF606Q8WXB4 792 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 EDEM1Q92611 657 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 E2F7Q96AV8 911 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 FAM81BQ96LP2 452 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 CEP295NLQ96MC4 621 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 UBXN6Q9BZV1 441 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 TSPY26PQ9H489 355 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 FAM124BQ9H5Z6 455 aaPredicted RBP9.01□□□□□ -0.97
USP3-217ENST00000560070 TLR8Q9NR97 1041 aaKnown RBP9.01□□□□□ -0.97
USP3-217ENST00000560070 COMMD8Q9NX08 183 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 CFAP97Q9P2B7 532 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 WNT16Q9UBV4 365 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.01□□□□□ -0.97
USP3-217ENST00000560070 CNTN6Q9UQ52 1028 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 SCML2Q9UQR0 700 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 WNT6Q9Y6F9 365 aa9.01□□□□□ -0.97
USP3-217ENST00000560070 TLR5O60602 858 aa9□□□□□ -0.97
USP3-217ENST00000560070 ATP5C1P36542 298 aaKnown RBP9□□□□□ -0.97
USP3-217ENST00000560070 YWHAGP61981 247 aaKnown RBP eCLIP9□□□□□ -0.97
USP3-217ENST00000560070 ARID5AQ03989 594 aa9□□□□□ -0.97
USP3-217ENST00000560070 ADIGQ0VDE8 80 aa9□□□□□ -0.97
USP3-217ENST00000560070 UBXN2BQ14CS0 331 aa9□□□□□ -0.97
USP3-217ENST00000560070 PKDCCQ504Y2 493 aa9□□□□□ -0.97
USP3-217ENST00000560070 C10orf120Q5SQS8 335 aa9□□□□□ -0.97
USP3-217ENST00000560070 TPRG1Q6ZUI0 275 aa9□□□□□ -0.97
USP3-217ENST00000560070 RSRC2Q7L4I2 434 aaKnown RBP9□□□□□ -0.97
USP3-217ENST00000560070 APTXQ7Z2E3 356 aaKnown RBP9□□□□□ -0.97
USP3-217ENST00000560070 MIB1Q86YT6 1006 aa9□□□□□ -0.97
USP3-217ENST00000560070 SCUBE3Q8IX30 993 aa9□□□□□ -0.97
USP3-217ENST00000560070 FAM71AQ8IYT1 594 aa9□□□□□ -0.97
USP3-217ENST00000560070 SIX6OS1Q8N1H7 587 aa9□□□□□ -0.97
USP3-217ENST00000560070 RNF214Q8ND24 703 aa9□□□□□ -0.97
USP3-217ENST00000560070 CLEC4CQ8WTT0 213 aa9□□□□□ -0.97
USP3-217ENST00000560070 DEPDC1BQ8WUY9 529 aa9□□□□□ -0.97
USP3-217ENST00000560070 SLC35F5Q8WV83 523 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms