RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 AP1G2O75843 785 aa13□□□□□ -0.33
SPG11-219ENST00000559822 EPN2O95208 641 aa13□□□□□ -0.33
SPG11-219ENST00000559822 CYP17A1P05093 508 aa13□□□□□ -0.33
SPG11-219ENST00000559822 NR2F2P24468 414 aa13□□□□□ -0.33
SPG11-219ENST00000559822 PXNP49023 591 aaPredicted RBP13□□□□□ -0.33
SPG11-219ENST00000559822 VAMP7P51809 220 aa13□□□□□ -0.33
SPG11-219ENST00000559822 NDUFA8P51970 172 aa13□□□□□ -0.33
SPG11-219ENST00000559822 NDST1P52848 882 aa13□□□□□ -0.33
SPG11-219ENST00000559822 DLG4P78352 724 aa13□□□□□ -0.33
SPG11-219ENST00000559822 ZXDBP98169 803 aa13□□□□□ -0.33
SPG11-219ENST00000559822 ELF2Q15723 593 aa13□□□□□ -0.33
SPG11-219ENST00000559822 PREPLQ4J6C6 727 aaPredicted RBP13□□□□□ -0.33
SPG11-219ENST00000559822 SNX30Q5VWJ9 437 aa13□□□□□ -0.33
SPG11-219ENST00000559822 NAIF1Q69YI7 327 aaPredicted RBP13□□□□□ -0.33
SPG11-219ENST00000559822 SV2AQ7L0J3 742 aa13□□□□□ -0.33
SPG11-219ENST00000559822 ACOT1Q86TX2 421 aa13□□□□□ -0.33
SPG11-219ENST00000559822 C11orf74Q86VG3 221 aa13□□□□□ -0.33
SPG11-219ENST00000559822 ADGRG2Q8IZP9 1017 aa13□□□□□ -0.33
SPG11-219ENST00000559822 CRYBG2Q8N1P7 616 aa13□□□□□ -0.33
SPG11-219ENST00000559822 GUF1Q8N442 669 aaKnown RBP13□□□□□ -0.33
SPG11-219ENST00000559822 KCNK16Q96T55 309 aa13□□□□□ -0.33
SPG11-219ENST00000559822 PNKPQ96T60 521 aa13□□□□□ -0.33
SPG11-219ENST00000559822 NACA2Q9H009 215 aa13□□□□□ -0.33
SPG11-219ENST00000559822 IL37Q9NZH6 218 aa13□□□□□ -0.33
SPG11-219ENST00000559822 EBF1Q9UH73 591 aa13□□□□□ -0.33
SPG11-219ENST00000559822 SH3BP1Q9Y3L3 701 aa13□□□□□ -0.33
SPG11-219ENST00000559822 RALGAPA1Q6GYQ0 2036 aa13□□□□□ -0.33
SPG11-219ENST00000559822 SPAG17Q6Q759 2223 aa12.99□□□□□ -0.33
SPG11-219ENST00000559822 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.99□□□□□ -0.33
SPG11-219ENST00000559822 FAM92AA1XBS5 289 aa12.99□□□□□ -0.33
SPG11-219ENST00000559822 TNFRSF10BO14763 440 aa12.99□□□□□ -0.33
SPG11-219ENST00000559822 SLC30A4O14863 429 aa12.99□□□□□ -0.33
SPG11-219ENST00000559822 RHOBTB1O94844 696 aa12.99□□□□□ -0.33
SPG11-219ENST00000559822 HLA-DRAP01903 254 aa12.99□□□□□ -0.33
SPG11-219ENST00000559822 APODP05090 189 aa12.99□□□□□ -0.33
SPG11-219ENST00000559822 FAM200BP0CF97 657 aa12.99□□□□□ -0.33
SPG11-219ENST00000559822 PSMC2P35998 433 aaKnown RBP12.99□□□□□ -0.33
SPG11-219ENST00000559822 OPRD1P41143 372 aa12.99□□□□□ -0.33
SPG11-219ENST00000559822 MRPS21P82921 87 aaKnown RBP12.99□□□□□ -0.33
SPG11-219ENST00000559822 GOLGA8FQ08AF8 430 aa12.99□□□□□ -0.33
SPG11-219ENST00000559822 GOLGA8DPQ0D2H9 430 aa12.99□□□□□ -0.33
SPG11-219ENST00000559822 DHCR24Q15392 516 aa12.99□□□□□ -0.33
SPG11-219ENST00000559822 HSF5Q4G112 596 aaPredicted RBP12.99□□□□□ -0.33
SPG11-219ENST00000559822 AASDHQ4L235 1098 aaPredicted RBP12.99□□□□□ -0.33
SPG11-219ENST00000559822 KRBA2Q6ZNG9 492 aa12.99□□□□□ -0.33
SPG11-219ENST00000559822 NUDT18Q6ZVK8 323 aa12.99□□□□□ -0.33
SPG11-219ENST00000559822 PAQR9Q6ZVX9 377 aa12.99□□□□□ -0.33
SPG11-219ENST00000559822 KBTBD6Q86V97 674 aa12.99□□□□□ -0.33
SPG11-219ENST00000559822 FAM186BQ8IYM0 893 aa12.99□□□□□ -0.33
SPG11-219ENST00000559822 FUKQ8N0W3 1084 aa12.99□□□□□ -0.33
SPG11-219ENST00000559822 C12orf50Q8NA57 414 aaPredicted RBP12.99□□□□□ -0.33
SPG11-219ENST00000559822 TSTD1Q8NFU3 115 aa12.99□□□□□ -0.33
SPG11-219ENST00000559822 SLC2A14Q8TDB8 520 aa12.99□□□□□ -0.33
SPG11-219ENST00000559822 USP33Q8TEY7 942 aa12.99□□□□□ -0.33
SPG11-219ENST00000559822 DDX1Q92499 740 aaKnown RBP12.99□□□□□ -0.33
SPG11-219ENST00000559822 EZH1Q92800 747 aaPredicted RBP12.99□□□□□ -0.33
SPG11-219ENST00000559822 ZC3H10Q96K80 434 aaKnown RBP12.99□□□□□ -0.33
SPG11-219ENST00000559822 DUSP9Q99956 384 aaKnown RBP12.99□□□□□ -0.33
SPG11-219ENST00000559822 SDCBP2Q9H190 292 aa12.99□□□□□ -0.33
SPG11-219ENST00000559822 CYP3A43Q9HB55 503 aa12.99□□□□□ -0.33
SPG11-219ENST00000559822 TLR8Q9NR97 1041 aaKnown RBP12.99□□□□□ -0.33
SPG11-219ENST00000559822 ATG2BQ96BY7 2078 aa12.98□□□□□ -0.33
SPG11-219ENST00000559822 KIAA1549LQ6ZVL6 1849 aa12.98□□□□□ -0.33
SPG11-219ENST00000559822 COCHO43405 550 aa12.98□□□□□ -0.33
SPG11-219ENST00000559822 ALDH1A2O94788 518 aa12.98□□□□□ -0.33
SPG11-219ENST00000559822 ZDHHC11BP0C7U3 371 aa12.98□□□□□ -0.33
SPG11-219ENST00000559822 ZNF806P0C7X5 589 aa12.98□□□□□ -0.33
SPG11-219ENST00000559822 ADH5P11766 374 aa12.98□□□□□ -0.33
SPG11-219ENST00000559822 CCDC130P13994 396 aa12.98□□□□□ -0.33
SPG11-219ENST00000559822 ASPAP45381 313 aa12.98□□□□□ -0.33
SPG11-219ENST00000559822 DGKEP52429 567 aa12.98□□□□□ -0.33
SPG11-219ENST00000559822 GAD2Q05329 585 aa12.98□□□□□ -0.33
SPG11-219ENST00000559822 INCA1Q0VD86 236 aa12.98□□□□□ -0.33
SPG11-219ENST00000559822 DPYDQ12882 1025 aa12.98□□□□□ -0.33
SPG11-219ENST00000559822 USP39Q53GS9 565 aaKnown RBP12.98□□□□□ -0.33
SPG11-219ENST00000559822 BTBD8Q5XKL5 378 aa12.98□□□□□ -0.33
SPG11-219ENST00000559822 TTC39CQ8N584 583 aa12.98□□□□□ -0.33
SPG11-219ENST00000559822 SCAMP5Q8TAC9 235 aa12.98□□□□□ -0.33
SPG11-219ENST00000559822 NT5C1AQ9BXI3 368 aa12.98□□□□□ -0.33
SPG11-219ENST00000559822 ARRDC1-AS1Q9H2J1 176 aa12.98□□□□□ -0.33
SPG11-219ENST00000559822 CSNK1G1Q9HCP0 422 aa12.98□□□□□ -0.33
SPG11-219ENST00000559822 PNPLA8Q9NP80 782 aa12.98□□□□□ -0.33
SPG11-219ENST00000559822 GMIPQ9P107 970 aa12.98□□□□□ -0.33
SPG11-219ENST00000559822 CHORDC1Q9UHD1 332 aaPredicted RBP12.98□□□□□ -0.33
SPG11-219ENST00000559822 MMP17Q9ULZ9 603 aa12.98□□□□□ -0.33
SPG11-219ENST00000559822 ZDHHC9Q9Y397 364 aa12.98□□□□□ -0.33
SPG11-219ENST00000559822 MYO16Q9Y6X6 1858 aa12.97□□□□□ -0.33
SPG11-219ENST00000559822 K7EQS6 105 aa12.97□□□□□ -0.33
SPG11-219ENST00000559822 STX10O60499 249 aa12.97□□□□□ -0.33
SPG11-219ENST00000559822 TLR5O60602 858 aa12.97□□□□□ -0.33
SPG11-219ENST00000559822 KAT7O95251 611 aa12.97□□□□□ -0.33
SPG11-219ENST00000559822 PRR29P0C7W0 189 aa12.97□□□□□ -0.33
SPG11-219ENST00000559822 HOXC13P31276 330 aa12.97□□□□□ -0.33
SPG11-219ENST00000559822 GTF2H1P32780 548 aa12.97□□□□□ -0.33
SPG11-219ENST00000559822 GRIA2P42262 883 aa12.97□□□□□ -0.33
SPG11-219ENST00000559822 GCLMP48507 274 aa12.97□□□□□ -0.33
SPG11-219ENST00000559822 LIMK1P53667 647 aa12.97□□□□□ -0.33
SPG11-219ENST00000559822 SEC13P55735 322 aa12.97□□□□□ -0.33
SPG11-219ENST00000559822 MAP3K7CLP57077 242 aa12.97□□□□□ -0.33
SPG11-219ENST00000559822 ADAM9Q13443 819 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms