RNA–Protein interactions for RNA: ENST00000559598.6

CRNDE-207, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-207ENST00000559598 ENTPD7Q9NQZ7 604 aa6.77□□□□□ -1.33
CRNDE-207ENST00000559598 C1orf112Q9NSG2 853 aa6.77□□□□□ -1.33
CRNDE-207ENST00000559598 SAMD15Q9P1V8 674 aa6.77□□□□□ -1.33
CRNDE-207ENST00000559598 TNPO3Q9Y5L0 923 aaKnown RBP6.77□□□□□ -1.33
CRNDE-207ENST00000559598 CDY2AQ9Y6F7 541 aa6.77□□□□□ -1.33
CRNDE-207ENST00000559598 CACNA1IQ9P0X4 2223 aa6.77□□□□□ -1.33
CRNDE-207ENST00000559598 CHD6Q8TD26 2715 aa6.77□□□□□ -1.33
CRNDE-207ENST00000559598 C2orf16Q68DN1 1984 aa6.77□□□□□ -1.33
CRNDE-207ENST00000559598 FRYLO94915 3013 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 BAZ2BQ9UIF8 2168 aaKnown RBP6.76□□□□□ -1.33
CRNDE-207ENST00000559598 FRMPD4Q14CM0 1322 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 IGSF9BQ9UPX0 1349 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 EVPLQ92817 2033 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 USP24Q9UPU5 2620 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.76□□□□□ -1.33
CRNDE-207ENST00000559598 RRN3P2A6NIE6 340 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 GOLGA8HP0CJ92 632 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 SP100P23497 879 aaPredicted RBP6.76□□□□□ -1.33
CRNDE-207ENST00000559598 CD52P31358 61 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 PFKPQ01813 784 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 DBPQ10586 325 aaPredicted RBP6.76□□□□□ -1.33
CRNDE-207ENST00000559598 BECN1Q14457 450 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 ZNF460Q14592 562 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 PLPP4Q5VZY2 271 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 KIAA1841Q6NSI8 718 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 XRRA1Q6P2D8 792 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 MFSD6Q6ZSS7 791 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 DDX53Q86TM3 631 aaKnown RBP6.76□□□□□ -1.33
CRNDE-207ENST00000559598 ZNF761Q86XN6 746 aaPredicted RBP6.76□□□□□ -1.33
CRNDE-207ENST00000559598 NOSTRINQ8IVI9 506 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 KIAA2013Q8IYS2 634 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 COLGALT1Q8NBJ5 622 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 CYP2W1Q8TAV3 490 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 CDHR1Q96JP9 859 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 TCF25Q9BQ70 676 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 POMKQ9H5K3 350 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 KAT14Q9H8E8 782 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 HELLSQ9NRZ9 838 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 ERAP1Q9NZ08 941 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 CROTQ9UKG9 612 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 DUSP12Q9UNI6 340 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 PCDHB7Q9Y5E2 793 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 PCDHA1Q9Y5I3 950 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 TRPV2Q9Y5S1 764 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 KDM3AQ9Y4C1 1321 aa6.76□□□□□ -1.33
CRNDE-207ENST00000559598 GPR179Q6PRD1 2367 aa6.75□□□□□ -1.33
CRNDE-207ENST00000559598 OTOL1A6NHN0 477 aaPredicted RBP6.75□□□□□ -1.33
CRNDE-207ENST00000559598 ZNF839A8K0R7 811 aa6.75□□□□□ -1.33
CRNDE-207ENST00000559598 GCOM1H8Y6P7 765 aaPredicted RBP6.75□□□□□ -1.33
CRNDE-207ENST00000559598 DDX3XO00571 662 aaKnown RBP eCLIP6.75□□□□□ -1.338e-7■■□□□ 12.6
CRNDE-207ENST00000559598 SCDO00767 359 aa6.75□□□□□ -1.33
CRNDE-207ENST00000559598 ZBTB5O15062 677 aa6.75□□□□□ -1.33
CRNDE-207ENST00000559598 C4BPAP04003 597 aaKnown RBP6.75□□□□□ -1.33
CRNDE-207ENST00000559598 PARP1P09874 1014 aaKnown RBP6.75□□□□□ -1.33
CRNDE-207ENST00000559598 POLR2MP0CAP2 368 aa6.75□□□□□ -1.33
CRNDE-207ENST00000559598 ZNF28P17035 718 aa6.75□□□□□ -1.33
CRNDE-207ENST00000559598 MLLT6P55198 1093 aaPredicted RBP6.75□□□□□ -1.33
CRNDE-207ENST00000559598 KRT17Q04695 432 aa6.75□□□□□ -1.33
CRNDE-207ENST00000559598 TDGQ13569 410 aa6.75□□□□□ -1.33
CRNDE-207ENST00000559598 SMC1AQ14683 1233 aaKnown RBP6.75□□□□□ -1.33
CRNDE-207ENST00000559598 NONOQ15233 471 aaKnown RBP eCLIP6.75□□□□□ -1.33
CRNDE-207ENST00000559598 ST3GAL2Q16842 350 aa6.75□□□□□ -1.33
CRNDE-207ENST00000559598 SKIDA1Q1XH10 827 aa6.75□□□□□ -1.33
CRNDE-207ENST00000559598 FAM26FQ5R3K3 315 aa6.75□□□□□ -1.33
CRNDE-207ENST00000559598 NT5DC1Q5TFE4 455 aa6.75□□□□□ -1.33
CRNDE-207ENST00000559598 CPZQ66K79 652 aa6.75□□□□□ -1.33
CRNDE-207ENST00000559598 FSTL4Q6MZW2 842 aa6.75□□□□□ -1.33
CRNDE-207ENST00000559598 IL31RAQ8NI17 732 aa6.75□□□□□ -1.33
CRNDE-207ENST00000559598 DNAJB3Q8WWF6 145 aa6.75□□□□□ -1.33
CRNDE-207ENST00000559598 RSPH1Q8WYR4 309 aa6.75□□□□□ -1.33
CRNDE-207ENST00000559598 AGO3Q9H9G7 860 aaKnown RBP6.75□□□□□ -1.33
CRNDE-207ENST00000559598 JMJD4Q9H9V9 463 aa6.75□□□□□ -1.33
CRNDE-207ENST00000559598 INTS7Q9NVH2 962 aaKnown RBP6.75□□□□□ -1.33
CRNDE-207ENST00000559598 RTEL1Q9NZ71 1219 aa6.75□□□□□ -1.33
CRNDE-207ENST00000559598 MAGEC2Q9UBF1 373 aaPredicted RBP6.75□□□□□ -1.33
CRNDE-207ENST00000559598 PADI3Q9ULW8 664 aa6.75□□□□□ -1.33
CRNDE-207ENST00000559598 ADAMTS20P59510 1910 aa6.75□□□□□ -1.33
CRNDE-207ENST00000559598 PKD1L2Q7Z442 2459 aa6.75□□□□□ -1.33
CRNDE-207ENST00000559598 DOCK8Q8NF50 2099 aa6.75□□□□□ -1.33
CRNDE-207ENST00000559598 MYH9P35579 1960 aaKnown RBP6.75□□□□□ -1.33
CRNDE-207ENST00000559598 PATJQ8NI35 1801 aa6.74□□□□□ -1.33
CRNDE-207ENST00000559598 SLC12A8A0AV02 714 aa6.74□□□□□ -1.33
CRNDE-207ENST00000559598 DENND3A2RUS2 1198 aa6.74□□□□□ -1.33
CRNDE-207ENST00000559598 PRAMEF25A6NGN4 478 aa6.74□□□□□ -1.33
CRNDE-207ENST00000559598 TBKBP1A7MCY6 615 aa6.74□□□□□ -1.33
CRNDE-207ENST00000559598 PRR5-ARHGAP8B1AHC4 643 aa6.74□□□□□ -1.33
CRNDE-207ENST00000559598 FOXD2O60548 495 aaPredicted RBP6.74□□□□□ -1.33
CRNDE-207ENST00000559598 FGAP02671 866 aa6.74□□□□□ -1.33
CRNDE-207ENST00000559598 HOXA13P31271 388 aaPredicted RBP6.74□□□□□ -1.33
CRNDE-207ENST00000559598 TCF7P36402 384 aaPredicted RBP6.74□□□□□ -1.33
CRNDE-207ENST00000559598 FLT3P36888 993 aa6.74□□□□□ -1.33
CRNDE-207ENST00000559598 MECP2P51608 486 aaKnown RBP6.74□□□□□ -1.33
CRNDE-207ENST00000559598 TERF1P54274 439 aa6.74□□□□□ -1.33
CRNDE-207ENST00000559598 ARHGAP8P85298 464 aa6.74□□□□□ -1.33
CRNDE-207ENST00000559598 GIT2Q14161 759 aa6.74□□□□□ -1.33
CRNDE-207ENST00000559598 SEC23AQ15436 765 aa6.74□□□□□ -1.33
CRNDE-207ENST00000559598 ATAT1Q5SQI0 421 aa6.74□□□□□ -1.33
CRNDE-207ENST00000559598 PHF19Q5T6S3 580 aa6.74□□□□□ -1.33
CRNDE-207ENST00000559598 UTP14CQ5TAP6 766 aaKnown RBP6.74□□□□□ -1.33
CRNDE-207ENST00000559598 TSHZ3Q63HK5 1081 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms