RNA–Protein interactions for RNA: ENST00000559240.5

PBX1-215, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 2,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-215ENST00000559240 SLC9A7Q96T83 725 aa17.15■□□□□ 0.34
PBX1-215ENST00000559240 ACP6Q9NPH0 428 aa17.15■□□□□ 0.34
PBX1-215ENST00000559240 CYLDQ9NQC7 956 aa17.15■□□□□ 0.34
PBX1-215ENST00000559240 ADAM28Q9UKQ2 775 aa17.15■□□□□ 0.34
PBX1-215ENST00000559240 E7EVH7 732 aa17.14■□□□□ 0.34
PBX1-215ENST00000559240 KIF5CO60282 957 aa17.14■□□□□ 0.34
PBX1-215ENST00000559240 MTA2O94776 668 aa17.14■□□□□ 0.34
PBX1-215ENST00000559240 PCSK1P29120 753 aa17.14■□□□□ 0.34
PBX1-215ENST00000559240 DEUP1Q05D60 604 aa17.14■□□□□ 0.34
PBX1-215ENST00000559240 C1QBPQ07021 282 aaKnown RBP17.14■□□□□ 0.34
PBX1-215ENST00000559240 MRPL58Q14197 206 aaKnown RBP17.14■□□□□ 0.34
PBX1-215ENST00000559240 WSCD1Q658N2 575 aa17.14■□□□□ 0.34
PBX1-215ENST00000559240 PALB2Q86YC2 1186 aa17.14■□□□□ 0.34
PBX1-215ENST00000559240 SLC35F6Q8N357 371 aa17.14■□□□□ 0.34
PBX1-215ENST00000559240 SP7Q8TDD2 431 aaPredicted RBP17.14■□□□□ 0.34
PBX1-215ENST00000559240 STK32AQ8WU08 396 aa17.14■□□□□ 0.34
PBX1-215ENST00000559240 AVENQ9NQS1 362 aaPredicted RBP17.14■□□□□ 0.34
PBX1-215ENST00000559240 DNAJB4Q9UDY4 337 aa17.14■□□□□ 0.34
PBX1-215ENST00000559240 CTAGE9A4FU28 777 aa17.14■□□□□ 0.33
PBX1-215ENST00000559240 RCCD1A6NED2 376 aa17.14■□□□□ 0.33
PBX1-215ENST00000559240 A8MXQ7 604 aa17.14■□□□□ 0.33
PBX1-215ENST00000559240 RPL34P49207 117 aaKnown RBP17.14■□□□□ 0.33
PBX1-215ENST00000559240 SLC11A1P49279 550 aa17.14■□□□□ 0.33
PBX1-215ENST00000559240 DEFB103AP81534 67 aa17.14■□□□□ 0.33
PBX1-215ENST00000559240 OLFML1Q6UWY5 402 aa17.14■□□□□ 0.33
PBX1-215ENST00000559240 TMEM35BQ8NCS4 154 aa17.14■□□□□ 0.33
PBX1-215ENST00000559240 OR6B3Q8NGW1 331 aa17.14■□□□□ 0.33
PBX1-215ENST00000559240 ZFAND2BQ8WV99 257 aa17.14■□□□□ 0.33
PBX1-215ENST00000559240 PKMYT1Q99640 499 aa17.14■□□□□ 0.33
PBX1-215ENST00000559240 TMEM98Q9Y2Y6 226 aa17.14■□□□□ 0.33
PBX1-215ENST00000559240 FGFR3P22607 806 aa17.14■□□□□ 0.33
PBX1-215ENST00000559240 GATMP50440 423 aa17.14■□□□□ 0.33
PBX1-215ENST00000559240 ZNF365Q70YC5 407 aa17.14■□□□□ 0.33
PBX1-215ENST00000559240 AGAP11Q8TF27 550 aa17.14■□□□□ 0.33
PBX1-215ENST00000559240 DHRS1Q96LJ7 313 aa17.14■□□□□ 0.33
PBX1-215ENST00000559240 WDR35Q9P2L0 1181 aa17.14■□□□□ 0.33
PBX1-215ENST00000559240 IGFBP6P24592 240 aaPredicted RBP17.13■□□□□ 0.33
PBX1-215ENST00000559240 C6orf89Q6UWU4 347 aa17.13■□□□□ 0.33
PBX1-215ENST00000559240 MON1BQ7L1V2 547 aa17.13■□□□□ 0.33
PBX1-215ENST00000559240 HNRNPABQ99729 332 aaKnown RBP17.13■□□□□ 0.33
PBX1-215ENST00000559240 LACRTQ9GZZ8 138 aa17.13■□□□□ 0.33
PBX1-215ENST00000559240 GTF3C4Q9UKN8 822 aa17.13■□□□□ 0.33
PBX1-215ENST00000559240 PATJQ8NI35 1801 aa17.13■□□□□ 0.33
PBX1-215ENST00000559240 SF3B1O75533 1304 aaKnown RBP eCLIP17.13■□□□□ 0.33
PBX1-215ENST00000559240 NLRC5Q86WI3 1866 aa17.13■□□□□ 0.33
PBX1-215ENST00000559240 VWA8A3KMH1 1905 aa17.13■□□□□ 0.33
PBX1-215ENST00000559240 CYP1A2P05177 515 aa17.13■□□□□ 0.33
PBX1-215ENST00000559240 LAG3P18627 525 aa17.13■□□□□ 0.33
PBX1-215ENST00000559240 OR1G1P47890 313 aa17.13■□□□□ 0.33
PBX1-215ENST00000559240 GALCP54803 685 aa17.13■□□□□ 0.33
PBX1-215ENST00000559240 PTP4A2Q12974 167 aa17.13■□□□□ 0.33
PBX1-215ENST00000559240 FAM171BQ6P995 826 aa17.13■□□□□ 0.33
PBX1-215ENST00000559240 B3GALNT2Q8NCR0 500 aa17.13■□□□□ 0.33
PBX1-215ENST00000559240 HEXIM2Q96MH2 286 aaKnown RBP17.13■□□□□ 0.33
PBX1-215ENST00000559240 RUFY1Q96T51 708 aa17.13■□□□□ 0.33
PBX1-215ENST00000559240 RTP3Q9BQQ7 232 aa17.13■□□□□ 0.33
PBX1-215ENST00000559240 CACNG4Q9UBN1 327 aa17.13■□□□□ 0.33
PBX1-215ENST00000559240 BRCA2P51587 3418 aa17.13■□□□□ 0.33
PBX1-215ENST00000559240 PTPRDP23468 1912 aa17.12■□□□□ 0.33
PBX1-215ENST00000559240 hCG_2014768A0A024R1R8 64 aa17.12■□□□□ 0.33
PBX1-215ENST00000559240 ABL1P00519 1130 aa17.12■□□□□ 0.33
PBX1-215ENST00000559240 ACRP10323 421 aa17.12■□□□□ 0.33
PBX1-215ENST00000559240 GABRB2P47870 512 aa17.12■□□□□ 0.33
PBX1-215ENST00000559240 BCAR1P56945 870 aa17.12■□□□□ 0.33
PBX1-215ENST00000559240 RHOT2Q8IXI1 618 aa17.12■□□□□ 0.33
PBX1-215ENST00000559240 MTIF3Q9H2K0 278 aaKnown RBP17.12■□□□□ 0.33
PBX1-215ENST00000559240 PPANQ9NQ55 473 aaKnown RBP17.12■□□□□ 0.33
PBX1-215ENST00000559240 TAS2R14Q9NYV8 317 aa17.12■□□□□ 0.33
PBX1-215ENST00000559240 LRRD1A4D1F6 860 aa17.12■□□□□ 0.33
PBX1-215ENST00000559240 GJB5O95377 273 aa17.12■□□□□ 0.33
PBX1-215ENST00000559240 FTLP02792 175 aaPredicted RBP17.12■□□□□ 0.33
PBX1-215ENST00000559240 ITGB1P05556 798 aa17.12■□□□□ 0.33
PBX1-215ENST00000559240 MMP8P22894 467 aa17.12■□□□□ 0.33
PBX1-215ENST00000559240 BRCC3P46736 316 aa17.12■□□□□ 0.33
PBX1-215ENST00000559240 PLCB3Q01970 1234 aa17.12■□□□□ 0.33
PBX1-215ENST00000559240 XRCC4Q13426 336 aa17.12■□□□□ 0.33
PBX1-215ENST00000559240 MAPRE1Q15691 268 aaKnown RBP17.12■□□□□ 0.33
PBX1-215ENST00000559240 GPIHBP1Q8IV16 184 aa17.12■□□□□ 0.33
PBX1-215ENST00000559240 MCOLN2Q8IZK6 566 aa17.12■□□□□ 0.33
PBX1-215ENST00000559240 SDR16C5Q8N3Y7 309 aa17.12■□□□□ 0.33
PBX1-215ENST00000559240 CYFIP2Q96F07 1278 aa17.12■□□□□ 0.33
PBX1-215ENST00000559240 DDX43Q9NXZ2 648 aaKnown RBP17.12■□□□□ 0.33
PBX1-215ENST00000559240 NOP53Q9NZM5 478 aaKnown RBP17.12■□□□□ 0.33
PBX1-215ENST00000559240 SMAPO00193 183 aa17.11■□□□□ 0.33
PBX1-215ENST00000559240 MICAL2O94851 1124 aa17.11■□□□□ 0.33
PBX1-215ENST00000559240 PTPN1P18031 435 aaKnown RBP17.11■□□□□ 0.33
PBX1-215ENST00000559240 LMO2P25791 158 aa17.11■□□□□ 0.33
PBX1-215ENST00000559240 GPD2P43304 727 aa17.11■□□□□ 0.33
PBX1-215ENST00000559240 EPHB4P54760 987 aa17.11■□□□□ 0.33
PBX1-215ENST00000559240 GPC5P78333 572 aa17.11■□□□□ 0.33
PBX1-215ENST00000559240 SKOR1P84550 965 aa17.11■□□□□ 0.33
PBX1-215ENST00000559240 ZNF394Q53GI3 561 aa17.11■□□□□ 0.33
PBX1-215ENST00000559240 SND1Q7KZF4 910 aaKnown RBP eCLIP17.11■□□□□ 0.33
PBX1-215ENST00000559240 THEM5Q8N1Q8 247 aa17.11■□□□□ 0.33
PBX1-215ENST00000559240 WDTC1Q8N5D0 677 aa17.11■□□□□ 0.33
PBX1-215ENST00000559240 DYDC1Q8WWB3 177 aa17.11■□□□□ 0.33
PBX1-215ENST00000559240 RFFLQ8WZ73 363 aa17.11■□□□□ 0.33
PBX1-215ENST00000559240 SLC35B4Q969S0 331 aa17.11■□□□□ 0.33
PBX1-215ENST00000559240 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.11■□□□□ 0.33
PBX1-215ENST00000559240 GOLGA8KD6RF30 607 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms