RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 ARIH2O95376 493 aa17.29■□□□□ 0.36
SPG11-215ENST00000559193 DLDP09622 509 aaKnown RBP17.29■□□□□ 0.36
SPG11-215ENST00000559193 SERPINB3P29508 390 aa17.29■□□□□ 0.36
SPG11-215ENST00000559193 STIP1P31948 543 aaKnown RBP17.29■□□□□ 0.36
SPG11-215ENST00000559193 PCK1P35558 622 aa17.29■□□□□ 0.36
SPG11-215ENST00000559193 GPD2P43304 727 aa17.29■□□□□ 0.36
SPG11-215ENST00000559193 CDK16Q00536 496 aa17.29■□□□□ 0.36
SPG11-215ENST00000559193 BLMHQ13867 455 aa17.29■□□□□ 0.36
SPG11-215ENST00000559193 C4orf50Q6ZRC1 276 aa17.29■□□□□ 0.36
SPG11-215ENST00000559193 FBXO41Q8TF61 875 aa17.29■□□□□ 0.36
SPG11-215ENST00000559193 TRAPPC12Q8WVT3 735 aa17.29■□□□□ 0.36
SPG11-215ENST00000559193 INO80BQ9C086 356 aaPredicted RBP17.29■□□□□ 0.36
SPG11-215ENST00000559193 TTLL3Q9Y4R7 772 aa17.29■□□□□ 0.36
SPG11-215ENST00000559193 WDR90Q96KV7 1748 aa17.29■□□□□ 0.36
SPG11-215ENST00000559193 FAM155BO75949 473 aa17.29■□□□□ 0.36
SPG11-215ENST00000559193 TGDSO95455 350 aa17.29■□□□□ 0.36
SPG11-215ENST00000559193 ZNF143P52747 638 aaPredicted RBP17.29■□□□□ 0.36
SPG11-215ENST00000559193 YWHAZP63104 245 aaKnown RBP17.29■□□□□ 0.36
SPG11-215ENST00000559193 TMEM132AQ24JP5 1023 aa17.29■□□□□ 0.36
SPG11-215ENST00000559193 TREML2Q5T2D2 321 aa17.29■□□□□ 0.36
SPG11-215ENST00000559193 LBX2Q6XYB7 198 aa17.29■□□□□ 0.36
SPG11-215ENST00000559193 FAF2Q96CS3 445 aa17.29■□□□□ 0.36
SPG11-215ENST00000559193 ZBTB10Q96DT7 871 aa17.29■□□□□ 0.36
SPG11-215ENST00000559193 TMEM176AQ96HP8 235 aa17.29■□□□□ 0.36
SPG11-215ENST00000559193 FAM167BQ9BTA0 163 aa17.29■□□□□ 0.36
SPG11-215ENST00000559193 MINDY3Q9H8M7 445 aa17.29■□□□□ 0.36
SPG11-215ENST00000559193 RPF1Q9H9Y2 349 aaKnown RBP17.29■□□□□ 0.36
SPG11-215ENST00000559193 A0A0G2JMZ2 1700 aa17.28■□□□□ 0.36
SPG11-215ENST00000559193 LRRC37A2A6NM11 1700 aa17.28■□□□□ 0.36
SPG11-215ENST00000559193 C2orf71A6NGG8 1288 aa17.28■□□□□ 0.36
SPG11-215ENST00000559193 CHADO15335 359 aa17.28■□□□□ 0.36
SPG11-215ENST00000559193 CCDC22O60826 627 aa17.28■□□□□ 0.36
SPG11-215ENST00000559193 SKAP2O75563 359 aaPredicted RBP17.28■□□□□ 0.36
SPG11-215ENST00000559193 LUC7L3O95232 432 aaKnown RBP17.28■□□□□ 0.36
SPG11-215ENST00000559193 ITGB3P05106 788 aa17.28■□□□□ 0.36
SPG11-215ENST00000559193 HSDL1Q3SXM5 330 aa17.28■□□□□ 0.36
SPG11-215ENST00000559193 CDHR3Q6ZTQ4 885 aa17.28■□□□□ 0.36
SPG11-215ENST00000559193 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.28■□□□□ 0.36
SPG11-215ENST00000559193 CXorf38Q8TB03 319 aa17.28■□□□□ 0.36
SPG11-215ENST00000559193 CFAP36Q96G28 342 aa17.28■□□□□ 0.36
SPG11-215ENST00000559193 PIWIL1Q96J94 861 aaKnown RBP17.28■□□□□ 0.36
SPG11-215ENST00000559193 GPR20Q99678 358 aa17.28■□□□□ 0.36
SPG11-215ENST00000559193 BTBD10Q9BSF8 475 aa17.28■□□□□ 0.36
SPG11-215ENST00000559193 USP29Q9HBJ7 922 aa17.28■□□□□ 0.36
SPG11-215ENST00000559193 MTO1Q9Y2Z2 717 aaKnown RBP17.28■□□□□ 0.36
SPG11-215ENST00000559193 H7C0C1 242 aa17.28■□□□□ 0.36
SPG11-215ENST00000559193 LIN7AO14910 233 aaPredicted RBP17.28■□□□□ 0.36
SPG11-215ENST00000559193 SPAG6O75602 509 aa17.28■□□□□ 0.36
SPG11-215ENST00000559193 IL18RAPO95256 599 aa17.28■□□□□ 0.36
SPG11-215ENST00000559193 GPD1P21695 349 aa17.28■□□□□ 0.36
SPG11-215ENST00000559193 ATP5OP48047 213 aa17.28■□□□□ 0.36
SPG11-215ENST00000559193 GCLCP48506 637 aaPredicted RBP17.28■□□□□ 0.36
SPG11-215ENST00000559193 SERPINB4P48594 390 aa17.28■□□□□ 0.36
SPG11-215ENST00000559193 PTDSS1P48651 473 aaKnown RBP17.28■□□□□ 0.36
SPG11-215ENST00000559193 C15orf59Q2T9L4 293 aaPredicted RBP17.28■□□□□ 0.36
SPG11-215ENST00000559193 C1orf228Q6PIY5 440 aa17.28■□□□□ 0.36
SPG11-215ENST00000559193 DSTYKQ6XUX3 929 aa17.28■□□□□ 0.36
SPG11-215ENST00000559193 RIOX2Q8IUF8 465 aa17.28■□□□□ 0.36
SPG11-215ENST00000559193 UBA3Q8TBC4 463 aa17.28■□□□□ 0.36
SPG11-215ENST00000559193 TRIM6Q9C030 488 aaPredicted RBP17.28■□□□□ 0.36
SPG11-215ENST00000559193 PNPLA8Q9NP80 782 aa17.28■□□□□ 0.36
SPG11-215ENST00000559193 RAB6BQ9NRW1 208 aa17.28■□□□□ 0.36
SPG11-215ENST00000559193 C2CD4BA6NLJ0 364 aa17.27■□□□□ 0.36
SPG11-215ENST00000559193 E5RJQ4 531 aa17.27■□□□□ 0.36
SPG11-215ENST00000559193 PIK3R2O00459 728 aa17.27■□□□□ 0.36
SPG11-215ENST00000559193 LGR5O75473 907 aa17.27■□□□□ 0.36
SPG11-215ENST00000559193 IL1BP01584 269 aa17.27■□□□□ 0.36
SPG11-215ENST00000559193 TGFB3P10600 412 aa17.27■□□□□ 0.36
SPG11-215ENST00000559193 MBTD1Q05BQ5 628 aa17.27■□□□□ 0.36
SPG11-215ENST00000559193 SH3D19Q5HYK7 790 aa17.27■□□□□ 0.36
SPG11-215ENST00000559193 JADE1Q6IE81 842 aa17.27■□□□□ 0.36
SPG11-215ENST00000559193 NSL1Q96IY1 281 aa17.27■□□□□ 0.36
SPG11-215ENST00000559193 SRPK1Q96SB4 655 aaKnown RBP17.27■□□□□ 0.36
SPG11-215ENST00000559193 CNPY3Q9BT09 278 aa17.27■□□□□ 0.36
SPG11-215ENST00000559193 PLAC1Q9HBJ0 212 aa17.27■□□□□ 0.36
SPG11-215ENST00000559193 LACTBL1A8MY62 500 aa17.27■□□□□ 0.35
SPG11-215ENST00000559193 TRIM49D1C9J1S8 452 aa17.27■□□□□ 0.35
SPG11-215ENST00000559193 GPR25O00155 361 aa17.27■□□□□ 0.35
SPG11-215ENST00000559193 IQCF3P0C7M6 154 aa17.27■□□□□ 0.35
SPG11-215ENST00000559193 CYP3A5P20815 502 aa17.27■□□□□ 0.35
SPG11-215ENST00000559193 TFDP2Q14188 446 aa17.27■□□□□ 0.35
SPG11-215ENST00000559193 KHDC1Q4VXA5 237 aaKnown RBP17.27■□□□□ 0.35
SPG11-215ENST00000559193 DALRD3Q5D0E6 543 aaKnown RBP17.27■□□□□ 0.35
SPG11-215ENST00000559193 FAM47CQ5HY64 1035 aa17.27■□□□□ 0.35
SPG11-215ENST00000559193 NOL9Q5SY16 702 aaKnown RBP17.27■□□□□ 0.35
SPG11-215ENST00000559193 TRIM68Q6AZZ1 485 aa17.27■□□□□ 0.35
SPG11-215ENST00000559193 TTC7BQ86TV6 843 aa17.27■□□□□ 0.35
SPG11-215ENST00000559193 SLC26A11Q86WA9 606 aa17.27■□□□□ 0.35
SPG11-215ENST00000559193 RXFP2Q8WXD0 754 aa17.27■□□□□ 0.35
SPG11-215ENST00000559193 RNF157Q96PX1 679 aa17.27■□□□□ 0.35
SPG11-215ENST00000559193 DCLRE1BQ9H816 532 aa17.27■□□□□ 0.35
SPG11-215ENST00000559193 CXorf49A8MYA2 514 aaPredicted RBP17.26■□□□□ 0.35
SPG11-215ENST00000559193 GSC2O15499 205 aa17.26■□□□□ 0.35
SPG11-215ENST00000559193 NEFHP12036 1026 aa17.26■□□□□ 0.35
SPG11-215ENST00000559193 CLCN3P51790 818 aa17.26■□□□□ 0.35
SPG11-215ENST00000559193 ZBTB16Q05516 673 aa17.26■□□□□ 0.35
SPG11-215ENST00000559193 CBLBQ13191 982 aa17.26■□□□□ 0.35
SPG11-215ENST00000559193 FAXCQ5TGI0 409 aa17.26■□□□□ 0.35
SPG11-215ENST00000559193 WDR78Q5VTH9 848 aa17.26■□□□□ 0.35
SPG11-215ENST00000559193 TTC39BQ5VTQ0 682 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms