RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 BRD2P25440 801 aaKnown RBP13.36□□□□□ -0.27
RABGGTA-207ENST00000558936 SLC7A9P82251 487 aa13.36□□□□□ -0.27
RABGGTA-207ENST00000558936 ZNF268Q14587 947 aaPredicted RBP13.36□□□□□ -0.27
RABGGTA-207ENST00000558936 GOLGA7BQ2TAP0 167 aa13.36□□□□□ -0.27
RABGGTA-207ENST00000558936 VWA3BQ502W6 1294 aa13.36□□□□□ -0.27
RABGGTA-207ENST00000558936 ARHGAP15Q53QZ3 475 aa13.36□□□□□ -0.27
RABGGTA-207ENST00000558936 TCP11X2Q5H9J9 407 aa13.36□□□□□ -0.27
RABGGTA-207ENST00000558936 CCDC183Q5T5S1 534 aa13.36□□□□□ -0.27
RABGGTA-207ENST00000558936 PMF1Q6P1K2 205 aa13.36□□□□□ -0.27
RABGGTA-207ENST00000558936 DHX40Q8IX18 779 aaKnown RBP13.36□□□□□ -0.27
RABGGTA-207ENST00000558936 ANKRD52Q8NB46 1076 aa13.36□□□□□ -0.27
RABGGTA-207ENST00000558936 FLCNQ8NFG4 579 aa13.36□□□□□ -0.27
RABGGTA-207ENST00000558936 DEPDC1BQ8WUY9 529 aa13.36□□□□□ -0.27
RABGGTA-207ENST00000558936 SLC35F5Q8WV83 523 aa13.36□□□□□ -0.27
RABGGTA-207ENST00000558936 TUBGCP2Q9BSJ2 902 aa13.36□□□□□ -0.27
RABGGTA-207ENST00000558936 NAA15Q9BXJ9 866 aaKnown RBP13.36□□□□□ -0.27
RABGGTA-207ENST00000558936 KCNH6Q9H252 994 aa13.36□□□□□ -0.27
RABGGTA-207ENST00000558936 TRPC7Q9HCX4 862 aa13.36□□□□□ -0.27
RABGGTA-207ENST00000558936 UBE2TQ9NPD8 197 aaPredicted RBP13.36□□□□□ -0.27
RABGGTA-207ENST00000558936 TJP2Q9UDY2 1190 aa13.36□□□□□ -0.27
RABGGTA-207ENST00000558936 ARHGAP26Q9UNA1 814 aa13.36□□□□□ -0.27
RABGGTA-207ENST00000558936 CACNA1HO95180 2353 aa13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 A0A1W2PQH9 124 aa13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 SOBPA7XYQ1 873 aa13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 KCNJ18B7U540 433 aa13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 CLSTN1O94985 981 aa13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 ATP1A3P13637 1013 aa13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 HDCP19113 662 aa13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 DDX6P26196 483 aaKnown RBP eCLIP13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 RPL34P49207 117 aaKnown RBP13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 TYRO3Q06418 890 aa13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 KCNJ12Q14500 433 aa13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 KRT31Q15323 416 aa13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 MAN2A1Q16706 1144 aa13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 EML3Q32P44 896 aa13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 LCLAT1Q6UWP7 414 aa13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 TPRG1Q6ZUI0 275 aa13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 SFTPA1Q8IWL2 248 aa13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 CELF5Q8N6W0 485 aaKnown RBP13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 RBBP8NLQ8NC74 664 aaPredicted RBP13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 PJA1Q8NG27 643 aa13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 SH3RF2Q8TEC5 729 aa13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 CLEC4CQ8WTT0 213 aa13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 MRPS31Q92665 395 aaKnown RBP13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 DNASE1L2Q92874 299 aa13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 FBXO32Q969P5 355 aa13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 E2F7Q96AV8 911 aa13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 NDST4Q9H3R1 872 aa13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 EBF3Q9H4W6 596 aa13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 BRD9Q9H8M2 597 aa13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 LTB4R2Q9NPC1 389 aa13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 SMPD4Q9NXE4 827 aa13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 TAB2Q9NYJ8 693 aa13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 UXTQ9UBK9 157 aaPredicted RBP13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 SCML2Q9UQR0 700 aa13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 PCDHB4Q9Y5E5 795 aa13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 WNT6Q9Y6F9 365 aa13.35□□□□□ -0.27
RABGGTA-207ENST00000558936 KANSL1LA0AUZ9 987 aa13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 GTPBP10A4D1E9 387 aaKnown RBP13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 LEFTY2O00292 366 aa13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 FOXN3O00409 490 aaPredicted RBP13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 PIK3R2O00459 728 aa13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 ZNF263O14978 683 aa13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 FYNP06241 537 aa13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 USP17L7P0C7H9 530 aa13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 CHRNB1P11230 501 aa13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 VDRP11473 427 aa13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 ANXA13P27216 316 aa13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 CLCN1P35523 988 aa13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 PFKPQ01813 784 aa13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 CT47A1Q5JQC4 288 aaPredicted RBP13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 PM20D1Q6GTS8 502 aa13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 CAVIN1Q6NZI2 390 aaKnown RBP13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 DENND1BQ6P3S1 775 aa13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 PKN3Q6P5Z2 889 aa13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 CREBRFQ8IUR6 639 aa13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 OLIG1Q8TAK6 271 aa13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 SHC3Q92529 594 aa13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 CLDN23Q96B33 292 aa13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 GCNAQ96QF7 691 aa13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 KLF16Q9BXK1 252 aaPredicted RBP13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 UBXN6Q9BZV1 441 aa13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 GANQ9H2C0 597 aa13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 FAM124BQ9H5Z6 455 aaPredicted RBP13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 PNPLA8Q9NP80 782 aa13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 CYLDQ9NQC7 956 aa13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 RBM12Q9NTZ6 932 aaKnown RBP13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 POLR3BQ9NW08 1133 aaPredicted RBP13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 TRPM5Q9NZQ8 1165 aa13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 FHOD1Q9Y613 1164 aa13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 CPQQ9Y646 472 aa13.34□□□□□ -0.27
RABGGTA-207ENST00000558936 TRAV19A0A0A6YYK7 116 aa13.33□□□□□ -0.28
RABGGTA-207ENST00000558936 LRRC10BA6NIK2 292 aa13.33□□□□□ -0.28
RABGGTA-207ENST00000558936 RTN3O95197 1032 aaPredicted RBP13.33□□□□□ -0.28
RABGGTA-207ENST00000558936 MBD3O95983 291 aa13.33□□□□□ -0.28
RABGGTA-207ENST00000558936 KLKB1P03952 638 aa13.33□□□□□ -0.28
RABGGTA-207ENST00000558936 PAEPP09466 180 aa13.33□□□□□ -0.28
RABGGTA-207ENST00000558936 TBXAS1P24557 533 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms