RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 PHLDB3Q6NSJ2 640 aa12.72□□□□□ -0.37
TPM1-216ENST00000558910 TTI2Q6NXR4 508 aa12.72□□□□□ -0.37
TPM1-216ENST00000558910 TXNDC11Q6PKC3 985 aa12.72□□□□□ -0.37
TPM1-216ENST00000558910 TSSK4Q6SA08 328 aa12.72□□□□□ -0.37
TPM1-216ENST00000558910 GPRIN1Q7Z2K8 1008 aa12.72□□□□□ -0.37
TPM1-216ENST00000558910 FRMD5Q7Z6J6 570 aa12.72□□□□□ -0.37
TPM1-216ENST00000558910 NUP93Q8N1F7 819 aa12.72□□□□□ -0.37
TPM1-216ENST00000558910 SH3RF2Q8TEC5 729 aa12.72□□□□□ -0.37
TPM1-216ENST00000558910 DNASE1L2Q92874 299 aa12.72□□□□□ -0.37
TPM1-216ENST00000558910 CYFIP2Q96F07 1278 aa12.72□□□□□ -0.37
TPM1-216ENST00000558910 TRMT2BQ96GJ1 504 aaKnown RBP12.72□□□□□ -0.37
TPM1-216ENST00000558910 SMARCD1Q96GM5 515 aa12.72□□□□□ -0.37
TPM1-216ENST00000558910 SLITRK1Q96PX8 696 aa12.72□□□□□ -0.37
TPM1-216ENST00000558910 LMAN1LQ9HAT1 526 aa12.72□□□□□ -0.37
TPM1-216ENST00000558910 DMAP1Q9NPF5 467 aaPredicted RBP12.72□□□□□ -0.37
TPM1-216ENST00000558910 CISHQ9NSE2 258 aa12.72□□□□□ -0.37
TPM1-216ENST00000558910 GMIPQ9P107 970 aa12.72□□□□□ -0.37
TPM1-216ENST00000558910 R4GN57 208 aa12.72□□□□□ -0.37
TPM1-216ENST00000558910 TICRRQ7Z2Z1 1910 aa12.71□□□□□ -0.37
TPM1-216ENST00000558910 BICDL2A1A5D9 508 aa12.71□□□□□ -0.37
TPM1-216ENST00000558910 SPECC1L-ADORA2AF8WAN1 911 aa12.71□□□□□ -0.37
TPM1-216ENST00000558910 CILPO75339 1184 aa12.71□□□□□ -0.37
TPM1-216ENST00000558910 FAM163BP0C2L3 166 aa12.71□□□□□ -0.37
TPM1-216ENST00000558910 CD19P15391 556 aa12.71□□□□□ -0.37
TPM1-216ENST00000558910 TRIM21P19474 475 aaKnown RBP12.71□□□□□ -0.37
TPM1-216ENST00000558910 DDX6P26196 483 aaKnown RBP eCLIP12.71□□□□□ -0.37
TPM1-216ENST00000558910 IFNAR2P48551 515 aa12.71□□□□□ -0.37
TPM1-216ENST00000558910 FMO5P49326 533 aa12.71□□□□□ -0.37
TPM1-216ENST00000558910 CSTF1Q05048 431 aaKnown RBP12.71□□□□□ -0.37
TPM1-216ENST00000558910 TPD52L1Q16890 204 aaPredicted RBP12.71□□□□□ -0.37
TPM1-216ENST00000558910 PPP1R26Q5T8A7 1209 aaPredicted RBP12.71□□□□□ -0.37
TPM1-216ENST00000558910 NAIF1Q69YI7 327 aaPredicted RBP12.71□□□□□ -0.37
TPM1-216ENST00000558910 FILIP1Q7Z7B0 1213 aa12.71□□□□□ -0.37
TPM1-216ENST00000558910 ZMIZ2Q8NF64 920 aa12.71□□□□□ -0.37
TPM1-216ENST00000558910 WHAMMQ8TF30 809 aa12.71□□□□□ -0.37
TPM1-216ENST00000558910 KAT5Q92993 513 aa12.71□□□□□ -0.37
TPM1-216ENST00000558910 SLC35C1Q96A29 364 aa12.71□□□□□ -0.37
TPM1-216ENST00000558910 MYRFLQ96LU7 910 aa12.71□□□□□ -0.37
TPM1-216ENST00000558910 PRRX2Q99811 253 aa12.71□□□□□ -0.37
TPM1-216ENST00000558910 GTPBP4Q9BZE4 634 aaKnown RBP12.71□□□□□ -0.37
TPM1-216ENST00000558910 NACA2Q9H009 215 aa12.71□□□□□ -0.37
TPM1-216ENST00000558910 RNF38Q9H0F5 515 aa12.71□□□□□ -0.37
TPM1-216ENST00000558910 LINC00597Q9H2U6 94 aa12.71□□□□□ -0.37
TPM1-216ENST00000558910 CCSER2Q9H7U1 834 aa12.71□□□□□ -0.37
TPM1-216ENST00000558910 CYP3A43Q9HB55 503 aa12.71□□□□□ -0.37
TPM1-216ENST00000558910 DUS2Q9NX74 493 aaKnown RBP12.71□□□□□ -0.37
TPM1-216ENST00000558910 NUDT5Q9UKK9 219 aa12.71□□□□□ -0.37
TPM1-216ENST00000558910 MRPS17Q9Y2R5 130 aaKnown RBP12.71□□□□□ -0.37
TPM1-216ENST00000558910 CPQQ9Y646 472 aa12.71□□□□□ -0.37
TPM1-216ENST00000558910 ZNF840PA6NDX5 716 aa12.7□□□□□ -0.38
TPM1-216ENST00000558910 SHISA7A6NL88 538 aa12.7□□□□□ -0.38
TPM1-216ENST00000558910 MAN2B1O00754 1011 aa12.7□□□□□ -0.38
TPM1-216ENST00000558910 CYP26A1O43174 497 aa12.7□□□□□ -0.38
TPM1-216ENST00000558910 RTN3O95197 1032 aaPredicted RBP12.7□□□□□ -0.38
TPM1-216ENST00000558910 ACO1P21399 889 aaKnown RBP12.7□□□□□ -0.38
TPM1-216ENST00000558910 PGFP49763 221 aa12.7□□□□□ -0.38
TPM1-216ENST00000558910 MRE11P49959 708 aa12.7□□□□□ -0.38
TPM1-216ENST00000558910 FCHO2Q0JRZ9 810 aa12.7□□□□□ -0.38
TPM1-216ENST00000558910 MTF1Q14872 753 aa12.7□□□□□ -0.38
TPM1-216ENST00000558910 Q6ZNB5 142 aa12.7□□□□□ -0.38
TPM1-216ENST00000558910 RRAGAQ7L523 313 aa12.7□□□□□ -0.38
TPM1-216ENST00000558910 UNC93AQ86WB7 457 aa12.7□□□□□ -0.38
TPM1-216ENST00000558910 C1orf210Q8IVY1 113 aa12.7□□□□□ -0.38
TPM1-216ENST00000558910 ZC3H3Q8IXZ2 948 aaKnown RBP12.7□□□□□ -0.38
TPM1-216ENST00000558910 ELOA2Q8IYF1 753 aaPredicted RBP12.7□□□□□ -0.38
TPM1-216ENST00000558910 CRYBG2Q8N1P7 616 aa12.7□□□□□ -0.38
TPM1-216ENST00000558910 CEP63Q96MT8 703 aa12.7□□□□□ -0.38
TPM1-216ENST00000558910 NUP62CLQ9H1M0 184 aa12.7□□□□□ -0.38
TPM1-216ENST00000558910 KCNH6Q9H252 994 aa12.7□□□□□ -0.38
TPM1-216ENST00000558910 CLSTN2Q9H4D0 955 aa12.7□□□□□ -0.38
TPM1-216ENST00000558910 METTL14Q9HCE5 456 aaKnown RBP12.7□□□□□ -0.38
TPM1-216ENST00000558910 HPS4Q9NQG7 708 aa12.7□□□□□ -0.38
TPM1-216ENST00000558910 FCF1Q9Y324 198 aaKnown RBP12.7□□□□□ -0.38
TPM1-216ENST00000558910 ZNF638Q14966 1978 aaKnown RBP12.7□□□□□ -0.38
TPM1-216ENST00000558910 ZFHX2Q9C0A1 2572 aaPredicted RBP12.7□□□□□ -0.38
TPM1-216ENST00000558910 F5P12259 2224 aa12.69□□□□□ -0.38
TPM1-216ENST00000558910 CACNA1HO95180 2353 aa12.69□□□□□ -0.38
TPM1-216ENST00000558910 OTOL1A6NHN0 477 aaPredicted RBP12.69□□□□□ -0.38
TPM1-216ENST00000558910 LEFTY2O00292 366 aa12.69□□□□□ -0.38
TPM1-216ENST00000558910 ARNTLO00327 626 aa12.69□□□□□ -0.38
TPM1-216ENST00000558910 PIK3R2O00459 728 aa12.69□□□□□ -0.38
TPM1-216ENST00000558910 MDM4O15151 490 aa12.69□□□□□ -0.38
TPM1-216ENST00000558910 NCAM2O15394 837 aa12.69□□□□□ -0.38
TPM1-216ENST00000558910 LAMTOR5O43504 91 aa12.69□□□□□ -0.38
TPM1-216ENST00000558910 TBX18O95935 607 aa12.69□□□□□ -0.38
TPM1-216ENST00000558910 PPP1R2P41236 205 aa12.69□□□□□ -0.38
TPM1-216ENST00000558910 ZXDBP98169 803 aa12.69□□□□□ -0.38
TPM1-216ENST00000558910 INCA1Q0VD86 236 aa12.69□□□□□ -0.38
TPM1-216ENST00000558910 KCNH2Q12809 1159 aa12.69□□□□□ -0.38
TPM1-216ENST00000558910 MTAPQ13126 283 aa12.69□□□□□ -0.38
TPM1-216ENST00000558910 CUL2Q13617 745 aa12.69□□□□□ -0.38
TPM1-216ENST00000558910 RUNX3Q13761 415 aa12.69□□□□□ -0.38
TPM1-216ENST00000558910 GOLGA7BQ2TAP0 167 aa12.69□□□□□ -0.38
TPM1-216ENST00000558910 ITPRIPL2Q3MIP1 535 aa12.69□□□□□ -0.38
TPM1-216ENST00000558910 Q6ZS52 159 aa12.69□□□□□ -0.38
TPM1-216ENST00000558910 CLEC20AQ6ZU45 233 aa12.69□□□□□ -0.38
TPM1-216ENST00000558910 PPM1KQ8N3J5 372 aa12.69□□□□□ -0.38
TPM1-216ENST00000558910 SLC4A11Q8NBS3 891 aa12.69□□□□□ -0.38
TPM1-216ENST00000558910 UBA3Q8TBC4 463 aa12.69□□□□□ -0.38
TPM1-216ENST00000558910 TMEM176AQ96HP8 235 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms