RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 PPP1R26Q5T8A7 1209 aaPredicted RBP13.25□□□□□ -0.29
SMAD3-208ENST00000558827 CPA6Q8N4T0 437 aa13.25□□□□□ -0.29
SMAD3-208ENST00000558827 FBXL13Q8NEE6 735 aa13.25□□□□□ -0.29
SMAD3-208ENST00000558827 CYP3A43Q9HB55 503 aa13.25□□□□□ -0.29
SMAD3-208ENST00000558827 CISHQ9NSE2 258 aa13.25□□□□□ -0.29
SMAD3-208ENST00000558827 ZSCAN32Q9NX65 697 aa13.25□□□□□ -0.29
SMAD3-208ENST00000558827 EHD2Q9NZN4 543 aa13.25□□□□□ -0.29
SMAD3-208ENST00000558827 ARMCX3Q9UH62 379 aaPredicted RBP13.25□□□□□ -0.29
SMAD3-208ENST00000558827 FANCMQ8IYD8 2048 aa13.24□□□□□ -0.29
SMAD3-208ENST00000558827 SOBPA7XYQ1 873 aa13.24□□□□□ -0.29
SMAD3-208ENST00000558827 PSMA7O14818 248 aa13.24□□□□□ -0.29
SMAD3-208ENST00000558827 OAS1P00973 400 aaKnown RBP13.24□□□□□ -0.29
SMAD3-208ENST00000558827 ACO1P21399 889 aaKnown RBP13.24□□□□□ -0.29
SMAD3-208ENST00000558827 SLC6A11P48066 632 aa13.24□□□□□ -0.29
SMAD3-208ENST00000558827 MLLT6P55198 1093 aaPredicted RBP13.24□□□□□ -0.29
SMAD3-208ENST00000558827 INCA1Q0VD86 236 aa13.24□□□□□ -0.29
SMAD3-208ENST00000558827 GRSF1Q12849 480 aaKnown RBP eCLIP13.24□□□□□ -0.29
SMAD3-208ENST00000558827 CCINQ13939 588 aa13.24□□□□□ -0.29
SMAD3-208ENST00000558827 DGKKQ5KSL6 1271 aa13.24□□□□□ -0.29
SMAD3-208ENST00000558827 HECTD3Q5T447 861 aa13.24□□□□□ -0.29
SMAD3-208ENST00000558827 ZC3H14Q6PJT7 736 aaKnown RBP13.24□□□□□ -0.29
SMAD3-208ENST00000558827 CLEC20AQ6ZU45 233 aa13.24□□□□□ -0.29
SMAD3-208ENST00000558827 CREBRFQ8IUR6 639 aa13.24□□□□□ -0.29
SMAD3-208ENST00000558827 SPEM1Q8N4L4 309 aa13.24□□□□□ -0.29
SMAD3-208ENST00000558827 HNRNPABQ99729 332 aaKnown RBP13.24□□□□□ -0.29
SMAD3-208ENST00000558827 P2RY13Q9BPV8 354 aa13.24□□□□□ -0.29
SMAD3-208ENST00000558827 NACA2Q9H009 215 aa13.24□□□□□ -0.29
SMAD3-208ENST00000558827 PRMT8Q9NR22 394 aaPredicted RBP13.24□□□□□ -0.29
SMAD3-208ENST00000558827 CIZ1Q9ULV3 898 aaPredicted RBP13.24□□□□□ -0.29
SMAD3-208ENST00000558827 OTOGLQ3ZCN5 2332 aa13.24□□□□□ -0.29
SMAD3-208ENST00000558827 HELZP42694 1942 aaKnown RBP13.23□□□□□ -0.29
SMAD3-208ENST00000558827 CFAP54Q96N23 3096 aa13.23□□□□□ -0.29
SMAD3-208ENST00000558827 SLC16A3O15427 465 aaKnown RBP13.23□□□□□ -0.29
SMAD3-208ENST00000558827 CYP26A1O43174 497 aa13.23□□□□□ -0.29
SMAD3-208ENST00000558827 STX10O60499 249 aa13.23□□□□□ -0.29
SMAD3-208ENST00000558827 RNF40O75150 1001 aa13.23□□□□□ -0.29
SMAD3-208ENST00000558827 CCR3P51677 355 aa13.23□□□□□ -0.29
SMAD3-208ENST00000558827 RAD23BP54727 409 aa13.23□□□□□ -0.29
SMAD3-208ENST00000558827 SEC13P55735 322 aa13.23□□□□□ -0.29
SMAD3-208ENST00000558827 SLC7A9P82251 487 aa13.23□□□□□ -0.29
SMAD3-208ENST00000558827 LRRC63Q05C16 580 aa13.23□□□□□ -0.29
SMAD3-208ENST00000558827 MORC3Q14149 939 aa13.23□□□□□ -0.29
SMAD3-208ENST00000558827 COBLL1Q53SF7 1204 aa13.23□□□□□ -0.29
SMAD3-208ENST00000558827 TMEM196Q5HYL7 178 aa13.23□□□□□ -0.29
SMAD3-208ENST00000558827 SFTPA1Q8IWL2 248 aa13.23□□□□□ -0.29
SMAD3-208ENST00000558827 ZC3H3Q8IXZ2 948 aaKnown RBP13.23□□□□□ -0.29
SMAD3-208ENST00000558827 KIAA2013Q8IYS2 634 aa13.23□□□□□ -0.29
SMAD3-208ENST00000558827 SLC4A11Q8NBS3 891 aa13.23□□□□□ -0.29
SMAD3-208ENST00000558827 NDRG1Q92597 394 aaKnown RBP13.23□□□□□ -0.29
SMAD3-208ENST00000558827 EZH1Q92800 747 aaPredicted RBP13.23□□□□□ -0.29
SMAD3-208ENST00000558827 ATP2A3Q93084 1043 aa13.23□□□□□ -0.29
SMAD3-208ENST00000558827 SLC35C1Q96A29 364 aa13.23□□□□□ -0.29
SMAD3-208ENST00000558827 MSANTD3Q96H12 275 aa13.23□□□□□ -0.29
SMAD3-208ENST00000558827 DHTKD1Q96HY7 919 aaPredicted RBP13.23□□□□□ -0.29
SMAD3-208ENST00000558827 CEP295NLQ96MC4 621 aa13.23□□□□□ -0.29
SMAD3-208ENST00000558827 NMUR1Q9HB89 426 aa13.23□□□□□ -0.29
SMAD3-208ENST00000558827 OSER1Q9NX31 292 aa13.23□□□□□ -0.29
SMAD3-208ENST00000558827 CHMP5Q9NZZ3 219 aa13.23□□□□□ -0.29
SMAD3-208ENST00000558827 A0A1W2PQH9 124 aa13.22□□□□□ -0.29
SMAD3-208ENST00000558827 HHLA1C9JL84 531 aa13.22□□□□□ -0.29
SMAD3-208ENST00000558827 TRDMT1O14717 391 aaKnown RBP13.22□□□□□ -0.29
SMAD3-208ENST00000558827 CYP17A1P05093 508 aa13.22□□□□□ -0.29
SMAD3-208ENST00000558827 TDGF1P13385 188 aa13.22□□□□□ -0.29
SMAD3-208ENST00000558827 CD19P15391 556 aa13.22□□□□□ -0.29
SMAD3-208ENST00000558827 PPP3CCP48454 512 aa13.22□□□□□ -0.29
SMAD3-208ENST00000558827 PDE6CP51160 858 aa13.22□□□□□ -0.29
SMAD3-208ENST00000558827 MESP2Q0VG99 397 aa13.22□□□□□ -0.29
SMAD3-208ENST00000558827 NR1H3Q13133 447 aa13.22□□□□□ -0.29
SMAD3-208ENST00000558827 ZNF528Q3MIS6 628 aa13.22□□□□□ -0.29
SMAD3-208ENST00000558827 TTI2Q6NXR4 508 aa13.22□□□□□ -0.29
SMAD3-208ENST00000558827 PRR23BQ6ZRT6 265 aa13.22□□□□□ -0.29
SMAD3-208ENST00000558827 NAT16Q8N8M0 369 aa13.22□□□□□ -0.29
SMAD3-208ENST00000558827 SUMF1Q8NBK3 374 aa13.22□□□□□ -0.29
SMAD3-208ENST00000558827 PDZD8Q8NEN9 1154 aa13.22□□□□□ -0.29
SMAD3-208ENST00000558827 UBA3Q8TBC4 463 aa13.22□□□□□ -0.29
SMAD3-208ENST00000558827 KAT5Q92993 513 aa13.22□□□□□ -0.29
SMAD3-208ENST00000558827 CD101Q93033 1021 aa13.22□□□□□ -0.29
SMAD3-208ENST00000558827 TMEM176AQ96HP8 235 aa13.22□□□□□ -0.29
SMAD3-208ENST00000558827 SRRTQ9BXP5 876 aaKnown RBP13.22□□□□□ -0.29
SMAD3-208ENST00000558827 CSNK1G1Q9HCP0 422 aa13.22□□□□□ -0.29
SMAD3-208ENST00000558827 ZDHHC4Q9NPG8 344 aa13.22□□□□□ -0.29
SMAD3-208ENST00000558827 IL37Q9NZH6 218 aa13.22□□□□□ -0.29
SMAD3-208ENST00000558827 SH3BP1Q9Y3L3 701 aa13.22□□□□□ -0.29
SMAD3-208ENST00000558827 MYO16Q9Y6X6 1858 aa13.22□□□□□ -0.29
SMAD3-208ENST00000558827 ZNF292O60281 2723 aa13.21□□□□□ -0.29
SMAD3-208ENST00000558827 K7ESF4 209 aa13.21□□□□□ -0.29
SMAD3-208ENST00000558827 TULP2O00295 520 aa13.21□□□□□ -0.29
SMAD3-208ENST00000558827 HRO43593 1189 aa13.21□□□□□ -0.29
SMAD3-208ENST00000558827 TLR5O60602 858 aa13.21□□□□□ -0.29
SMAD3-208ENST00000558827 NFATC1O95644 943 aa13.21□□□□□ -0.29
SMAD3-208ENST00000558827 OLFM2O95897 454 aa13.21□□□□□ -0.29
SMAD3-208ENST00000558827 HMBSP08397 361 aa13.21□□□□□ -0.29
SMAD3-208ENST00000558827 TRIM21P19474 475 aaKnown RBP13.21□□□□□ -0.29
SMAD3-208ENST00000558827 OPRD1P41143 372 aa13.21□□□□□ -0.29
SMAD3-208ENST00000558827 FMO5P49326 533 aa13.21□□□□□ -0.29
SMAD3-208ENST00000558827 AMPD2Q01433 879 aa13.21□□□□□ -0.29
SMAD3-208ENST00000558827 KDSRQ06136 332 aa13.21□□□□□ -0.29
SMAD3-208ENST00000558827 ENPEPQ07075 957 aa13.21□□□□□ -0.29
SMAD3-208ENST00000558827 CUL2Q13617 745 aa13.21□□□□□ -0.29
SMAD3-208ENST00000558827 DHCR24Q15392 516 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms