RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 WNT8BQ93098 351 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 CHMP6Q96FZ7 201 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 SERPINB12Q96P63 405 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 ZIC5Q96T25 663 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 SNRNP25Q9BV90 132 aaKnown RBP11.04□□□□□ -0.64
TPM1-210ENST00000558264 OSBPL7Q9BZF2 842 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 ROPN1BQ9BZX4 212 aaPredicted RBP11.04□□□□□ -0.64
TPM1-210ENST00000558264 ARHGAP39Q9C0H5 1083 aa11.04□□□□□ -0.64
TPM1-210ENST00000558264 ROPN1Q9HAT0 212 aaPredicted RBP11.04□□□□□ -0.64
TPM1-210ENST00000558264 UBQLN1Q9UMX0 589 aaKnown RBP11.04□□□□□ -0.64
TPM1-210ENST00000558264 TIMM13Q9Y5L4 95 aaPredicted RBP11.04□□□□□ -0.64
TPM1-210ENST00000558264 F5H423 210 aaPredicted RBP11.03□□□□□ -0.64
TPM1-210ENST00000558264 H7C0C1 242 aa11.03□□□□□ -0.64
TPM1-210ENST00000558264 MCF2LO15068 1137 aa11.03□□□□□ -0.64
TPM1-210ENST00000558264 SPAG7O75391 227 aa11.03□□□□□ -0.64
TPM1-210ENST00000558264 BRAFP15056 766 aa11.03□□□□□ -0.64
TPM1-210ENST00000558264 DRD4P21917 467 aa11.03□□□□□ -0.64
TPM1-210ENST00000558264 ATP5OP48047 213 aa11.03□□□□□ -0.64
TPM1-210ENST00000558264 SLC6A3Q01959 620 aa11.03□□□□□ -0.64
TPM1-210ENST00000558264 TAOK1Q7L7X3 1001 aa11.03□□□□□ -0.64
TPM1-210ENST00000558264 FAXDC2Q96IV6 333 aa11.03□□□□□ -0.64
TPM1-210ENST00000558264 SEC16BQ96JE7 1060 aa11.03□□□□□ -0.64
TPM1-210ENST00000558264 TSPYL1Q9H0U9 437 aa11.03□□□□□ -0.64
TPM1-210ENST00000558264 SNX25Q9H3E2 840 aa11.03□□□□□ -0.64
TPM1-210ENST00000558264 APOC4-APOC2K7ER74 178 aa11.03□□□□□ -0.64
TPM1-210ENST00000558264 HAS3O00219 553 aa11.03□□□□□ -0.64
TPM1-210ENST00000558264 APOC2P02655 101 aa11.03□□□□□ -0.64
TPM1-210ENST00000558264 GCAP28676 217 aa11.03□□□□□ -0.64
TPM1-210ENST00000558264 HDAC4P56524 1084 aa11.03□□□□□ -0.64
TPM1-210ENST00000558264 PURAQ00577 322 aaKnown RBP11.03□□□□□ -0.64
TPM1-210ENST00000558264 MORF4L2Q15014 288 aa11.03□□□□□ -0.64
TPM1-210ENST00000558264 ZKSCAN8Q15776 578 aaPredicted RBP11.03□□□□□ -0.64
TPM1-210ENST00000558264 HIF1AQ16665 826 aa11.03□□□□□ -0.64
TPM1-210ENST00000558264 SPRED3Q2MJR0 410 aa11.03□□□□□ -0.64
TPM1-210ENST00000558264 BBS9Q3SYG4 887 aa11.03□□□□□ -0.64
TPM1-210ENST00000558264 APBB1IPQ7Z5R6 666 aaPredicted RBP11.03□□□□□ -0.64
TPM1-210ENST00000558264 FAM228AQ86W67 206 aa11.03□□□□□ -0.64
TPM1-210ENST00000558264 OSTM1Q86WC4 334 aa11.03□□□□□ -0.64
TPM1-210ENST00000558264 LRRC52Q8N7C0 313 aa11.03□□□□□ -0.64
TPM1-210ENST00000558264 TRPV1Q8NER1 839 aa11.03□□□□□ -0.64
TPM1-210ENST00000558264 CCHCR1Q8TD31 782 aa11.03□□□□□ -0.64
TPM1-210ENST00000558264 P3H4Q92791 437 aa11.03□□□□□ -0.64
TPM1-210ENST00000558264 PAIP2Q9BPZ3 127 aaKnown RBP11.03□□□□□ -0.64
TPM1-210ENST00000558264 WDR83Q9BRX9 315 aaKnown RBP11.03□□□□□ -0.64
TPM1-210ENST00000558264 SLC4A5Q9BY07 1137 aa11.03□□□□□ -0.64
TPM1-210ENST00000558264 STMN4Q9H169 189 aaPredicted RBP11.03□□□□□ -0.64
TPM1-210ENST00000558264 TMPRSS4Q9NRS4 437 aa11.03□□□□□ -0.64
TPM1-210ENST00000558264 PIRO00625 290 aa11.02□□□□□ -0.64
TPM1-210ENST00000558264 AVILO75366 819 aa11.02□□□□□ -0.64
TPM1-210ENST00000558264 BEST1O76090 585 aa11.02□□□□□ -0.64
TPM1-210ENST00000558264 KIAA0754O94854 1291 aa11.02□□□□□ -0.64
TPM1-210ENST00000558264 IL4RP24394 825 aa11.02□□□□□ -0.64
TPM1-210ENST00000558264 PCK1P35558 622 aa11.02□□□□□ -0.64
TPM1-210ENST00000558264 PITX1P78337 314 aaPredicted RBP11.02□□□□□ -0.64
TPM1-210ENST00000558264 ROR1Q01973 937 aa11.02□□□□□ -0.64
TPM1-210ENST00000558264 TRIM32Q13049 653 aa11.02□□□□□ -0.64
TPM1-210ENST00000558264 CRHR2Q13324 411 aa11.02□□□□□ -0.64
TPM1-210ENST00000558264 TAZQ16635 292 aa11.02□□□□□ -0.64
TPM1-210ENST00000558264 GNASQ5JWF2 1037 aa11.02□□□□□ -0.64
TPM1-210ENST00000558264 CTU1Q7Z7A3 348 aaKnown RBP11.02□□□□□ -0.64
TPM1-210ENST00000558264 ADGRF2Q8IZF7 708 aa11.02□□□□□ -0.64
TPM1-210ENST00000558264 MICALL1Q8N3F8 863 aa11.02□□□□□ -0.64
TPM1-210ENST00000558264 APPL2Q8NEU8 664 aa11.02□□□□□ -0.64
TPM1-210ENST00000558264 ZNF317Q96PQ6 595 aaPredicted RBP11.02□□□□□ -0.64
TPM1-210ENST00000558264 RSAD1Q9HA92 442 aa11.02□□□□□ -0.64
TPM1-210ENST00000558264 XPO7Q9UIA9 1087 aaKnown RBP11.02□□□□□ -0.64
TPM1-210ENST00000558264 KIAA1257Q9ULG3 409 aa11.02□□□□□ -0.64
TPM1-210ENST00000558264 DERAQ9Y315 318 aa11.02□□□□□ -0.64
TPM1-210ENST00000558264 MFHAS1Q9Y4C4 1052 aa11.02□□□□□ -0.64
TPM1-210ENST00000558264 RASA4BC9J798 803 aa11.02□□□□□ -0.65
TPM1-210ENST00000558264 PTGESO14684 152 aa11.02□□□□□ -0.65
TPM1-210ENST00000558264 RASA4O43374 803 aa11.02□□□□□ -0.65
TPM1-210ENST00000558264 MLH1P40692 756 aa11.02□□□□□ -0.65
TPM1-210ENST00000558264 RGS2P41220 211 aa11.02□□□□□ -0.65
TPM1-210ENST00000558264 TAF6P49848 677 aa11.02□□□□□ -0.65
TPM1-210ENST00000558264 GPX6P59796 221 aa11.02□□□□□ -0.65
TPM1-210ENST00000558264 C17orf99Q6UX52 265 aa11.02□□□□□ -0.65
TPM1-210ENST00000558264 CENPUQ71F23 418 aa11.02□□□□□ -0.65
TPM1-210ENST00000558264 TMEM110Q86TL2 294 aa11.02□□□□□ -0.65
TPM1-210ENST00000558264 C4orf33Q8N1A6 199 aa11.02□□□□□ -0.65
TPM1-210ENST00000558264 PYROXD2Q8N2H3 581 aa11.02□□□□□ -0.65
TPM1-210ENST00000558264 OTUD6BQ8N6M0 293 aa11.02□□□□□ -0.65
TPM1-210ENST00000558264 TTC13Q8NBP0 860 aa11.02□□□□□ -0.65
TPM1-210ENST00000558264 RNF169Q8NCN4 708 aa11.02□□□□□ -0.65
TPM1-210ENST00000558264 PCDH19Q8TAB3 1148 aa11.02□□□□□ -0.65
TPM1-210ENST00000558264 FAM149B1Q96BN6 582 aa11.02□□□□□ -0.65
TPM1-210ENST00000558264 CABS1Q96KC9 395 aa11.02□□□□□ -0.65
TPM1-210ENST00000558264 RNF157Q96PX1 679 aa11.02□□□□□ -0.65
TPM1-210ENST00000558264 ELAC2Q9BQ52 826 aaKnown RBP11.02□□□□□ -0.65
TPM1-210ENST00000558264 DHX35Q9H5Z1 703 aaKnown RBP11.02□□□□□ -0.65
TPM1-210ENST00000558264 PCDH18Q9HCL0 1135 aa11.02□□□□□ -0.65
TPM1-210ENST00000558264 GGT7Q9UJ14 662 aa11.02□□□□□ -0.65
TPM1-210ENST00000558264 CHMP2BQ9UQN3 213 aa11.02□□□□□ -0.65
TPM1-210ENST00000558264 FARP1Q9Y4F1 1045 aaPredicted RBP11.02□□□□□ -0.65
TPM1-210ENST00000558264 CLUHO75153 1309 aa11.02□□□□□ -0.65
TPM1-210ENST00000558264 A0A087WUV0 522 aaPredicted RBP11.02□□□□□ -0.65
TPM1-210ENST00000558264 KCNN4O15554 427 aa11.02□□□□□ -0.65
TPM1-210ENST00000558264 CDH16O75309 829 aa11.02□□□□□ -0.65
TPM1-210ENST00000558264 NDUFV1P49821 464 aa11.02□□□□□ -0.65
TPM1-210ENST00000558264 LILRA4P59901 499 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms