RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 SLC35G2Q8TBE7 412 aa13.04□□□□□ -0.32
TPM1-209ENST00000558072 ZNF564Q8TBZ8 553 aaPredicted RBP13.04□□□□□ -0.32
TPM1-209ENST00000558072 FNIP1Q8TF40 1166 aa13.04□□□□□ -0.32
TPM1-209ENST00000558072 MRPL38Q96DV4 380 aaKnown RBP13.04□□□□□ -0.32
TPM1-209ENST00000558072 MCRS1Q96EZ8 462 aa13.04□□□□□ -0.32
TPM1-209ENST00000558072 PGLYRP2Q96PD5 576 aa13.04□□□□□ -0.32
TPM1-209ENST00000558072 SLITRK1Q96PX8 696 aa13.04□□□□□ -0.32
TPM1-209ENST00000558072 LZTFL1Q9NQ48 299 aa13.04□□□□□ -0.32
TPM1-209ENST00000558072 IP6K2Q9UHH9 426 aa13.04□□□□□ -0.32
TPM1-209ENST00000558072 GUCA1BQ9UMX6 200 aa13.04□□□□□ -0.32
TPM1-209ENST00000558072 ESPNB1AK53 854 aa13.03□□□□□ -0.32
TPM1-209ENST00000558072 PER2O15055 1255 aa13.03□□□□□ -0.32
TPM1-209ENST00000558072 NCK2O43639 380 aa13.03□□□□□ -0.32
TPM1-209ENST00000558072 SOAT2O75908 522 aa13.03□□□□□ -0.32
TPM1-209ENST00000558072 VNN2O95498 520 aa13.03□□□□□ -0.32
TPM1-209ENST00000558072 LRG1P02750 347 aa13.03□□□□□ -0.32
TPM1-209ENST00000558072 SPATA31D3P0C874 917 aa13.03□□□□□ -0.32
TPM1-209ENST00000558072 LCP1P13796 627 aa13.03□□□□□ -0.32
TPM1-209ENST00000558072 RRM1P23921 792 aa13.03□□□□□ -0.32
TPM1-209ENST00000558072 YWHAQP27348 245 aa13.03□□□□□ -0.32
TPM1-209ENST00000558072 HOXA9P31269 272 aa13.03□□□□□ -0.32
TPM1-209ENST00000558072 RGS7P49802 495 aa13.03□□□□□ -0.32
TPM1-209ENST00000558072 TKTL1P51854 596 aa13.03□□□□□ -0.32
TPM1-209ENST00000558072 MRPS5P82675 430 aaKnown RBP13.03□□□□□ -0.32
TPM1-209ENST00000558072 ADIGQ0VDE8 80 aa13.03□□□□□ -0.32
TPM1-209ENST00000558072 PTP4A2Q12974 167 aa13.03□□□□□ -0.32
TPM1-209ENST00000558072 PIGHQ14442 188 aaPredicted RBP13.03□□□□□ -0.32
TPM1-209ENST00000558072 PABPC1LQ4VXU2 614 aaKnown RBP13.03□□□□□ -0.32
TPM1-209ENST00000558072 FAM102AQ5T9C2 384 aaPredicted RBP13.03□□□□□ -0.32
TPM1-209ENST00000558072 PM20D1Q6GTS8 502 aa13.03□□□□□ -0.32
TPM1-209ENST00000558072 SPATA31D4Q6ZUB0 917 aa13.03□□□□□ -0.32
TPM1-209ENST00000558072 RBM23Q86U06 439 aaKnown RBP13.03□□□□□ -0.32
TPM1-209ENST00000558072 MON1AQ86VX9 555 aa13.03□□□□□ -0.32
TPM1-209ENST00000558072 XYLT1Q86Y38 959 aa13.03□□□□□ -0.32
TPM1-209ENST00000558072 REXO1L1PQ8IX06 675 aa13.03□□□□□ -0.32
TPM1-209ENST00000558072 LEMD2Q8NC56 503 aa13.03□□□□□ -0.32
TPM1-209ENST00000558072 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.03□□□□□ -0.32
TPM1-209ENST00000558072 NUP85Q9BW27 656 aa13.03□□□□□ -0.32
TPM1-209ENST00000558072 TRMT1Q9NXH9 659 aaKnown RBP13.03□□□□□ -0.32
TPM1-209ENST00000558072 FBXW11Q9UKB1 542 aa13.03□□□□□ -0.32
TPM1-209ENST00000558072 STAP1Q9ULZ2 295 aa13.03□□□□□ -0.32
TPM1-209ENST00000558072 SCML2Q9UQR0 700 aa13.03□□□□□ -0.32
TPM1-209ENST00000558072 USP3Q9Y6I4 520 aa13.03□□□□□ -0.32
TPM1-209ENST00000558072 MYH10P35580 1976 aa13.02□□□□□ -0.32
TPM1-209ENST00000558072 TGM5O43548 720 aa13.02□□□□□ -0.33
TPM1-209ENST00000558072 XYLBO75191 536 aa13.02□□□□□ -0.33
TPM1-209ENST00000558072 POU2F2P09086 479 aa13.02□□□□□ -0.33
TPM1-209ENST00000558072 HNRNPA1P09651 372 aaKnown RBP eCLIP13.02□□□□□ -0.33
TPM1-209ENST00000558072 GPR15P49685 360 aa13.02□□□□□ -0.33
TPM1-209ENST00000558072 SLC5A3P53794 718 aa13.02□□□□□ -0.33
TPM1-209ENST00000558072 CACNA2D1P54289 1103 aa13.02□□□□□ -0.33
TPM1-209ENST00000558072 YWHAZP63104 245 aaKnown RBP13.02□□□□□ -0.33
TPM1-209ENST00000558072 MTA1Q13330 715 aa13.02□□□□□ -0.33
TPM1-209ENST00000558072 MAMLD1Q13495 774 aa13.02□□□□□ -0.33
TPM1-209ENST00000558072 ZNF697Q5TEC3 545 aa13.02□□□□□ -0.33
TPM1-209ENST00000558072 LLGL2Q6P1M3 1020 aa13.02□□□□□ -0.33
TPM1-209ENST00000558072 LILRA6Q6PI73 481 aa13.02□□□□□ -0.33
TPM1-209ENST00000558072 MICALL1Q8N3F8 863 aa13.02□□□□□ -0.33
TPM1-209ENST00000558072 KREMEN2Q8NCW0 462 aa13.02□□□□□ -0.33
TPM1-209ENST00000558072 ZMIZ2Q8NF64 920 aa13.02□□□□□ -0.33
TPM1-209ENST00000558072 MYLIPQ8WY64 445 aa13.02□□□□□ -0.33
TPM1-209ENST00000558072 ZNF512Q96ME7 567 aaPredicted RBP13.02□□□□□ -0.33
TPM1-209ENST00000558072 KCNK16Q96T55 309 aa13.02□□□□□ -0.33
TPM1-209ENST00000558072 CRISPLD1Q9H336 500 aa13.02□□□□□ -0.33
TPM1-209ENST00000558072 TLE6Q9H808 572 aa13.02□□□□□ -0.33
TPM1-209ENST00000558072 POPDC2Q9HBU9 364 aa13.02□□□□□ -0.33
TPM1-209ENST00000558072 TLR8Q9NR97 1041 aaKnown RBP13.02□□□□□ -0.33
TPM1-209ENST00000558072 OLA1Q9NTK5 396 aaKnown RBP13.02□□□□□ -0.33
TPM1-209ENST00000558072 DZANK1Q9NVP4 752 aa13.02□□□□□ -0.33
TPM1-209ENST00000558072 IL37Q9NZH6 218 aa13.02□□□□□ -0.33
TPM1-209ENST00000558072 CYTH4Q9UIA0 394 aa13.02□□□□□ -0.33
TPM1-209ENST00000558072 ZMYM5Q9UJ78 669 aa13.02□□□□□ -0.33
TPM1-209ENST00000558072 PAXBP1Q9Y5B6 917 aa13.02□□□□□ -0.33
TPM1-209ENST00000558072 PTPRDP23468 1912 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 LAMA3Q16787 3333 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 FAM92AA1XBS5 289 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 MACROD2A1Z1Q3 448 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 HHLA1C9JL84 531 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 TNFRSF10BO14763 440 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 CAPN9O14815 690 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 PAPSS1O43252 624 aaPredicted RBP13.01□□□□□ -0.33
TPM1-209ENST00000558072 ZNF500O60304 480 aaPredicted RBP13.01□□□□□ -0.33
TPM1-209ENST00000558072 RNF8O76064 485 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 F9P00740 461 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 RALAP11233 206 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 MAN1A1P33908 653 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 CLCN4P51793 760 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 DAOAP59103 153 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 DDR2Q16832 855 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 PPM1LQ5SGD2 360 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 SDHAF4Q5VUM1 108 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 C11orf63Q6NUN7 778 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 OLFML1Q6UWY5 402 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 FAM183BPQ6ZVS7 135 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 SCUBE3Q8IX30 993 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 VN1R2Q8NFZ6 395 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 CASP10Q92851 521 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 FAM149B1Q96BN6 582 aa13.01□□□□□ -0.33
TPM1-209ENST00000558072 TRMT2BQ96GJ1 504 aaKnown RBP13.01□□□□□ -0.33
TPM1-209ENST00000558072 MYRFLQ96LU7 910 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms