RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 MORC3Q14149 939 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 MTF1Q14872 753 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 PON2Q15165 354 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 PDGFRLQ15198 375 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 ZNF528Q3MIS6 628 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 CBWD6Q4V339 395 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 CBWD3Q5JTY5 395 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 CBWD5Q5RIA9 395 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 TTI2Q6NXR4 508 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 FBXL13Q8NEE6 735 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 SCAMP5Q8TAC9 235 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 SLC2A14Q8TDB8 520 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 SH3RF2Q8TEC5 729 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 OSCP1Q8WVF1 389 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 NELL1Q92832 810 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 TATDN2Q93075 761 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 FAXDC2Q96IV6 333 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 SLITRK1Q96PX8 696 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 HNRNPABQ99729 332 aaKnown RBP9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 NT5C1AQ9BXI3 368 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 LINC00597Q9H2U6 94 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 CSNK1G1Q9HCP0 422 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 DMAP1Q9NPF5 467 aaPredicted RBP9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 PRMT8Q9NR22 394 aaPredicted RBP9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 KRT82Q9NSB4 513 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 FAM49BQ9NUQ9 324 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 RAB20Q9NX57 234 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 CHMP5Q9NZZ3 219 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 CHORDC1Q9UHD1 332 aaPredicted RBP9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 FBXO4Q9UKT5 387 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 COQ4Q9Y3A0 265 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 R4GN57 208 aa9.31□□□□□ -0.92
SNRPA1-206ENST00000558059 MYO16Q9Y6X6 1858 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 SPAG17Q6Q759 2223 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 PRR23AA6NEV1 266 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 BIN1O00499 593 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 ABL1P00519 1130 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 ZDHHC11BP0C7U3 371 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 TDGF1P13385 188 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 CD58P19256 250 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 PPP1R2P41236 205 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 PGFP49763 221 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 PDE6CP51160 858 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 SLC5A3P53794 718 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 MAP3K7CLP57077 242 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 UBE2HP62256 183 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 CSTF1Q05048 431 aaKnown RBP9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 IFRD2Q12894 506 aaPredicted RBP9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 STIM1Q13586 685 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 CCINQ13939 588 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 EML3Q32P44 896 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 DCAF17Q5H9S7 520 aaPredicted RBP9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 TCERG1LQ5VWI1 586 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 SNX30Q5VWJ9 437 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 KLHL10Q6JEL2 608 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 CC2D1AQ6P1N0 951 aaPredicted RBP9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 FOXR2Q6PJQ5 311 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 FILIP1Q7Z7B0 1213 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 CCDC150Q8NCX0 1101 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 NELFBQ8WX92 580 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 OVCA2Q8WZ82 227 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 NKD2Q969F2 451 aaPredicted RBP9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 FBXO32Q969P5 355 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 SLC35C1Q96A29 364 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 CYFIP2Q96F07 1278 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 CEP63Q96MT8 703 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 ARID3AQ99856 593 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 RBM12Q9NTZ6 932 aaKnown RBP9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 COMMD8Q9NX08 183 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 DUS2Q9NX74 493 aaKnown RBP9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 ARMCX3Q9UH62 379 aaPredicted RBP9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 WNT6Q9Y6F9 365 aa9.3□□□□□ -0.92
SNRPA1-206ENST00000558059 DMXL1Q9Y485 3027 aa9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 CEP250Q9BV73 2442 aa9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 HHLA1C9JL84 531 aa9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 LEFTY2O00292 366 aa9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 TRDMT1O14717 391 aaKnown RBP9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 PMM2O15305 246 aa9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 FAM200BP0CF97 657 aa9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 ADORA2BP29275 332 aa9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 GJA4P35212 333 aa9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 IFNAR2P48551 515 aa9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 RAD23BP54727 409 aa9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 LRRC32Q14392 662 aa9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 TMEM196Q5HYL7 178 aa9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 DGKKQ5KSL6 1271 aa9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 PPP1R26Q5T8A7 1209 aaPredicted RBP9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 FSTL4Q6MZW2 842 aa9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 TSSK4Q6SA08 328 aa9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 Q6ZS52 159 aa9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 CLEC20AQ6ZU45 233 aa9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 KIAA1958Q8N8K9 716 aa9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 SLC4A11Q8NBS3 891 aa9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 TTC16Q8NEE8 873 aa9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 PDZD8Q8NEN9 1154 aa9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 IER2Q9BTL4 223 aa9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 SEMA4AQ9H3S1 761 aa9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 FAM124BQ9H5Z6 455 aaPredicted RBP9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 ECT2Q9H8V3 914 aa9.29□□□□□ -0.92
SNRPA1-206ENST00000558059 METTL14Q9HCE5 456 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms