RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 SYT11Q9BT88 431 aa22.38■■□□□ 1.17
CASC4-204ENST00000557945 MIS12Q9H081 205 aa22.38■■□□□ 1.17
CASC4-204ENST00000557945 POMKQ9H5K3 350 aa22.38■■□□□ 1.17
CASC4-204ENST00000557945 IL21Q9HBE4 155 aa22.38■■□□□ 1.17
CASC4-204ENST00000557945 IL37Q9NZH6 218 aa22.38■■□□□ 1.17
CASC4-204ENST00000557945 GMIPQ9P107 970 aa22.38■■□□□ 1.17
CASC4-204ENST00000557945 ARHGAP20Q9P2F6 1191 aa22.38■■□□□ 1.17
CASC4-204ENST00000557945 CHORDC1Q9UHD1 332 aaPredicted RBP22.38■■□□□ 1.17
CASC4-204ENST00000557945 SCML2Q9UQR0 700 aa22.38■■□□□ 1.17
CASC4-204ENST00000557945 C2orf16Q68DN1 1984 aa22.38■■□□□ 1.17
CASC4-204ENST00000557945 DOCK6Q96HP0 2047 aa22.38■■□□□ 1.17
CASC4-204ENST00000557945 E5RJQ4 531 aa22.38■■□□□ 1.17
CASC4-204ENST00000557945 GABBR2O75899 941 aa22.38■■□□□ 1.17
CASC4-204ENST00000557945 ABL1P00519 1130 aa22.38■■□□□ 1.17
CASC4-204ENST00000557945 SNX16P57768 344 aa22.38■■□□□ 1.17
CASC4-204ENST00000557945 PUS10Q3MIT2 529 aaKnown RBP22.38■■□□□ 1.17
CASC4-204ENST00000557945 GAREM2Q75VX8 874 aa22.38■■□□□ 1.17
CASC4-204ENST00000557945 GET4Q7L5D6 327 aaPredicted RBP22.38■■□□□ 1.17
CASC4-204ENST00000557945 ERICH1Q86X53 443 aa22.38■■□□□ 1.17
CASC4-204ENST00000557945 SLC30A5Q8TAD4 765 aa22.38■■□□□ 1.17
CASC4-204ENST00000557945 SHKBP1Q8TBC3 707 aa22.38■■□□□ 1.17
CASC4-204ENST00000557945 IPO4Q8TEX9 1081 aaKnown RBP22.38■■□□□ 1.17
CASC4-204ENST00000557945 AVENQ9NQS1 362 aaPredicted RBP22.38■■□□□ 1.17
CASC4-204ENST00000557945 TRPM5Q9NZQ8 1165 aa22.38■■□□□ 1.17
CASC4-204ENST00000557945 USP3Q9Y6I4 520 aa22.38■■□□□ 1.17
CASC4-204ENST00000557945 PATJQ8NI35 1801 aa22.37■■□□□ 1.17
CASC4-204ENST00000557945 EYSQ5T1H1 3165 aa22.37■■□□□ 1.17
CASC4-204ENST00000557945 ZBED1O96006 694 aa22.37■■□□□ 1.17
CASC4-204ENST00000557945 F11P03951 625 aa22.37■■□□□ 1.17
CASC4-204ENST00000557945 NSFP46459 744 aaKnown RBP22.37■■□□□ 1.17
CASC4-204ENST00000557945 TEAD2Q15562 447 aa22.37■■□□□ 1.17
CASC4-204ENST00000557945 PTPN20Q4JDL3 420 aa22.37■■□□□ 1.17
CASC4-204ENST00000557945 ARHGAP15Q53QZ3 475 aa22.37■■□□□ 1.17
CASC4-204ENST00000557945 PRSS36Q5K4E3 855 aa22.37■■□□□ 1.17
CASC4-204ENST00000557945 CCDC186Q7Z3E2 898 aa22.37■■□□□ 1.17
CASC4-204ENST00000557945 TMEM110Q86TL2 294 aa22.37■■□□□ 1.17
CASC4-204ENST00000557945 MSANTD4Q8NCY6 345 aa22.37■■□□□ 1.17
CASC4-204ENST00000557945 PDZD8Q8NEN9 1154 aa22.37■■□□□ 1.17
CASC4-204ENST00000557945 NDRG1Q92597 394 aaKnown RBP22.37■■□□□ 1.17
CASC4-204ENST00000557945 MRPS31Q92665 395 aaKnown RBP22.37■■□□□ 1.17
CASC4-204ENST00000557945 DEF6Q9H4E7 631 aa22.37■■□□□ 1.17
CASC4-204ENST00000557945 CYLDQ9NQC7 956 aa22.37■■□□□ 1.17
CASC4-204ENST00000557945 CNGB3Q9NQW8 809 aa22.37■■□□□ 1.17
CASC4-204ENST00000557945 TJP2Q9UDY2 1190 aa22.37■■□□□ 1.17
CASC4-204ENST00000557945 FAM50BQ9Y247 325 aa22.37■■□□□ 1.17
CASC4-204ENST00000557945 GREB1Q4ZG55 1949 aa22.36■■□□□ 1.17
CASC4-204ENST00000557945 FAM92AA1XBS5 289 aa22.36■■□□□ 1.17
CASC4-204ENST00000557945 TMCO5BA8MYB1 307 aa22.36■■□□□ 1.17
CASC4-204ENST00000557945 DDX3XO00571 662 aaKnown RBP eCLIP22.36■■□□□ 1.171e-16■■■■■ 46.1
CASC4-204ENST00000557945 UNGP13051 313 aaPredicted RBP22.36■■□□□ 1.17
CASC4-204ENST00000557945 CEBPBP17676 345 aa22.36■■□□□ 1.17
CASC4-204ENST00000557945 EIF4A3P38919 411 aaKnown RBP22.36■■□□□ 1.17
CASC4-204ENST00000557945 PPP3CCP48454 512 aa22.36■■□□□ 1.17
CASC4-204ENST00000557945 RPL34P49207 117 aaKnown RBP22.36■■□□□ 1.17
CASC4-204ENST00000557945 CYP4F8P98187 520 aa22.36■■□□□ 1.17
CASC4-204ENST00000557945 AAK1Q2M2I8 961 aa22.36■■□□□ 1.17
CASC4-204ENST00000557945 TMEM150AQ86TG1 271 aa22.36■■□□□ 1.17
CASC4-204ENST00000557945 SCUBE3Q8IX30 993 aa22.36■■□□□ 1.17
CASC4-204ENST00000557945 OLIG1Q8TAK6 271 aa22.36■■□□□ 1.17
CASC4-204ENST00000557945 OVCA2Q8WZ82 227 aa22.36■■□□□ 1.17
CASC4-204ENST00000557945 PANX2Q96RD6 677 aa22.36■■□□□ 1.17
CASC4-204ENST00000557945 CHP1Q99653 195 aa22.36■■□□□ 1.17
CASC4-204ENST00000557945 TLR8Q9NR97 1041 aaKnown RBP22.36■■□□□ 1.17
CASC4-204ENST00000557945 ADAMTS1Q9UHI8 967 aa22.36■■□□□ 1.17
CASC4-204ENST00000557945 NRG2O14511 850 aaPredicted RBP22.35■■□□□ 1.17
CASC4-204ENST00000557945 MOSPD3O75425 235 aa22.35■■□□□ 1.17
CASC4-204ENST00000557945 TADA3O75528 432 aa22.35■■□□□ 1.17
CASC4-204ENST00000557945 FBXO21O94952 628 aa22.35■■□□□ 1.17
CASC4-204ENST00000557945 ERBB2P04626 1255 aa22.35■■□□□ 1.17
CASC4-204ENST00000557945 PM20D1Q6GTS8 502 aa22.35■■□□□ 1.17
CASC4-204ENST00000557945 OR6B2Q6IFH4 312 aa22.35■■□□□ 1.17
CASC4-204ENST00000557945 ACAD10Q6JQN1 1059 aa22.35■■□□□ 1.17
CASC4-204ENST00000557945 CLEC4CQ8WTT0 213 aa22.35■■□□□ 1.17
CASC4-204ENST00000557945 C18orf8Q96DM3 657 aa22.35■■□□□ 1.17
CASC4-204ENST00000557945 SLITRK6Q9H5Y7 841 aa22.35■■□□□ 1.17
CASC4-204ENST00000557945 A0A1W2PQH9 124 aa22.34■■□□□ 1.17
CASC4-204ENST00000557945 ZNF840PA6NDX5 716 aa22.34■■□□□ 1.17
CASC4-204ENST00000557945 SP100P23497 879 aaPredicted RBP22.34■■□□□ 1.17
CASC4-204ENST00000557945 GBP2P32456 591 aaPredicted RBP22.34■■□□□ 1.17
CASC4-204ENST00000557945 DAOAP59103 153 aa22.34■■□□□ 1.17
CASC4-204ENST00000557945 CENPCQ03188 943 aa22.34■■□□□ 1.17
CASC4-204ENST00000557945 SMAD2Q15796 467 aaKnown RBP22.34■■□□□ 1.17
CASC4-204ENST00000557945 C2CD6Q53TS8 623 aa22.34■■□□□ 1.17
CASC4-204ENST00000557945 GPR158Q5T848 1215 aa22.34■■□□□ 1.17
CASC4-204ENST00000557945 MMS22LQ6ZRQ5 1243 aa22.34■■□□□ 1.17
CASC4-204ENST00000557945 MON1AQ86VX9 555 aa22.34■■□□□ 1.17
CASC4-204ENST00000557945 ARHGAP18Q8N392 663 aa22.34■■□□□ 1.17
CASC4-204ENST00000557945 CCDC42Q96M95 316 aa22.34■■□□□ 1.17
CASC4-204ENST00000557945 C11orf70Q9BRQ4 267 aa22.34■■□□□ 1.17
CASC4-204ENST00000557945 TRPC7Q9HCX4 862 aa22.34■■□□□ 1.17
CASC4-204ENST00000557945 TAS2R14Q9NYV8 317 aa22.34■■□□□ 1.17
CASC4-204ENST00000557945 NAGPAQ9UK23 515 aa22.34■■□□□ 1.17
CASC4-204ENST00000557945 NOTCH4Q99466 2003 aa22.34■■□□□ 1.17
CASC4-204ENST00000557945 NCANO14594 1321 aa22.33■■□□□ 1.17
CASC4-204ENST00000557945 SSU72P8A0A1W2PR75 194 aa22.33■■□□□ 1.17
CASC4-204ENST00000557945 PAPSS1O43252 624 aaPredicted RBP22.33■■□□□ 1.17
CASC4-204ENST00000557945 IL9P15248 144 aa22.33■■□□□ 1.17
CASC4-204ENST00000557945 MMP8P22894 467 aa22.33■■□□□ 1.17
CASC4-204ENST00000557945 PGFP49763 221 aa22.33■■□□□ 1.17
CASC4-204ENST00000557945 KCNQ1P51787 676 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms