RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 USP7Q93009 1102 aa3.88□□□□□ -1.79
FOXN3-217ENST00000557572 RFKQ969G6 155 aa3.88□□□□□ -1.79
FOXN3-217ENST00000557572 TBC1D20Q96BZ9 403 aa3.88□□□□□ -1.79
FOXN3-217ENST00000557572 PPM1MQ96MI6 270 aa3.88□□□□□ -1.79
FOXN3-217ENST00000557572 OSBPL9Q96SU4 736 aa3.88□□□□□ -1.79
FOXN3-217ENST00000557572 C11orf54Q9H0W9 315 aaPredicted RBP3.88□□□□□ -1.79
FOXN3-217ENST00000557572 SMYD2Q9NRG4 433 aa3.88□□□□□ -1.79
FOXN3-217ENST00000557572 SERTAD4Q9NUC0 356 aa3.88□□□□□ -1.79
FOXN3-217ENST00000557572 BLOC1S4Q9NUP1 217 aa3.88□□□□□ -1.79
FOXN3-217ENST00000557572 RRN3Q9NYV6 651 aa3.88□□□□□ -1.79
FOXN3-217ENST00000557572 EDARQ9UNE0 448 aa3.88□□□□□ -1.79
FOXN3-217ENST00000557572 APOBEC2Q9Y235 224 aaKnown RBP3.88□□□□□ -1.79
FOXN3-217ENST00000557572 PCDHGA9Q9Y5G4 932 aaKnown RBP3.88□□□□□ -1.79
FOXN3-217ENST00000557572 PCDHGA8Q9Y5G5 932 aa3.88□□□□□ -1.79
FOXN3-217ENST00000557572 PCDHGA7Q9Y5G6 932 aa3.88□□□□□ -1.79
FOXN3-217ENST00000557572 PCDHGA6Q9Y5G7 932 aa3.88□□□□□ -1.79
FOXN3-217ENST00000557572 PCDHGA3Q9Y5H0 932 aa3.88□□□□□ -1.79
FOXN3-217ENST00000557572 PCDHGA2Q9Y5H1 932 aa3.88□□□□□ -1.79
FOXN3-217ENST00000557572 WASHC2AQ641Q2 1341 aa3.88□□□□□ -1.79
FOXN3-217ENST00000557572 WDR17Q8IZU2 1322 aa3.88□□□□□ -1.79
FOXN3-217ENST00000557572 LY6G6EA0A0G2JKS1 128 aa3.87□□□□□ -1.79
FOXN3-217ENST00000557572 CCDC195A0A1B0GUA6 201 aa3.87□□□□□ -1.79
FOXN3-217ENST00000557572 IFITM10A6NMD0 228 aa3.87□□□□□ -1.79
FOXN3-217ENST00000557572 M0R3H8 397 aa3.87□□□□□ -1.79
FOXN3-217ENST00000557572 EYA2O00167 538 aa3.87□□□□□ -1.79
FOXN3-217ENST00000557572 TLR5O60602 858 aa3.87□□□□□ -1.79
FOXN3-217ENST00000557572 IGKV3-20P01619 116 aa3.87□□□□□ -1.79
FOXN3-217ENST00000557572 CD4P01730 458 aa3.87□□□□□ -1.79
FOXN3-217ENST00000557572 PRF1P14222 555 aa3.87□□□□□ -1.79
FOXN3-217ENST00000557572 NDUFB7P17568 137 aa3.87□□□□□ -1.79
FOXN3-217ENST00000557572 CCND1P24385 295 aa3.87□□□□□ -1.79
FOXN3-217ENST00000557572 TSPAN7P41732 249 aa3.87□□□□□ -1.79
FOXN3-217ENST00000557572 WASP42768 502 aa3.87□□□□□ -1.79
FOXN3-217ENST00000557572 RECQLP46063 649 aaPredicted RBP3.87□□□□□ -1.79
FOXN3-217ENST00000557572 TM4SF4P48230 202 aa3.87□□□□□ -1.79
FOXN3-217ENST00000557572 CCT5P48643 541 aa3.87□□□□□ -1.79
FOXN3-217ENST00000557572 PIGFQ07326 219 aa3.87□□□□□ -1.79
FOXN3-217ENST00000557572 FAPQ12884 760 aa3.87□□□□□ -1.79
FOXN3-217ENST00000557572 G3BP1Q13283 466 aaKnown RBP eCLIP3.87□□□□□ -1.79
FOXN3-217ENST00000557572 FAM133BQ5BKY9 247 aaKnown RBP3.87□□□□□ -1.79
FOXN3-217ENST00000557572 GPATCH4Q5T3I0 446 aaKnown RBP3.87□□□□□ -1.79
FOXN3-217ENST00000557572 NKAIN3Q8N8D7 197 aa3.87□□□□□ -1.79
FOXN3-217ENST00000557572 IL17RDQ8NFM7 739 aa3.87□□□□□ -1.79
FOXN3-217ENST00000557572 SLC35G2Q8TBE7 412 aa3.87□□□□□ -1.79
FOXN3-217ENST00000557572 CDK5RAP3Q96JB5 506 aa3.87□□□□□ -1.79
FOXN3-217ENST00000557572 AIFM3Q96NN9 605 aa3.87□□□□□ -1.79
FOXN3-217ENST00000557572 WDR12Q9GZL7 423 aaKnown RBP3.87□□□□□ -1.79
FOXN3-217ENST00000557572 VSX1Q9NZR4 365 aaPredicted RBP3.87□□□□□ -1.79
FOXN3-217ENST00000557572 KLHL13Q9P2N7 655 aa3.87□□□□□ -1.79
FOXN3-217ENST00000557572 ISY1Q9ULR0 285 aaKnown RBP3.87□□□□□ -1.79
FOXN3-217ENST00000557572 TMX2Q9Y320 296 aa3.87□□□□□ -1.79
FOXN3-217ENST00000557572 TCRBV7S2A1N4TA0A589 114 aa3.86□□□□□ -1.79
FOXN3-217ENST00000557572 GFPT2O94808 682 aa3.86□□□□□ -1.79
FOXN3-217ENST00000557572 ANXA1P04083 346 aa3.86□□□□□ -1.79
FOXN3-217ENST00000557572 RHOP08100 348 aa3.86□□□□□ -1.79
FOXN3-217ENST00000557572 IFIT1P09914 478 aaKnown RBP3.86□□□□□ -1.79
FOXN3-217ENST00000557572 MTHFD1P11586 935 aaKnown RBP3.86□□□□□ -1.79
FOXN3-217ENST00000557572 HOXC13P31276 330 aa3.86□□□□□ -1.79
FOXN3-217ENST00000557572 IL6STP40189 918 aaPredicted RBP3.86□□□□□ -1.79
FOXN3-217ENST00000557572 CLK1P49759 484 aaKnown RBP3.86□□□□□ -1.79
FOXN3-217ENST00000557572 MPP1Q00013 466 aa3.86□□□□□ -1.79
FOXN3-217ENST00000557572 CREMQ03060 361 aa3.86□□□□□ -1.79
FOXN3-217ENST00000557572 PDE1CQ14123 709 aaPredicted RBP3.86□□□□□ -1.79
FOXN3-217ENST00000557572 ZNF267Q14586 743 aaPredicted RBP3.86□□□□□ -1.79
FOXN3-217ENST00000557572 CHSY1Q86X52 802 aa3.86□□□□□ -1.79
FOXN3-217ENST00000557572 CHCHD4Q8N4Q1 142 aa3.86□□□□□ -1.79
FOXN3-217ENST00000557572 C8orf58Q8NAV2 365 aa3.86□□□□□ -1.79
FOXN3-217ENST00000557572 C1orf162Q8NEQ5 155 aaPredicted RBP3.86□□□□□ -1.79
FOXN3-217ENST00000557572 NSUN6Q8TEA1 469 aaKnown RBP3.86□□□□□ -1.79
FOXN3-217ENST00000557572 GOLGA1Q92805 767 aa3.86□□□□□ -1.79
FOXN3-217ENST00000557572 COQ8BQ96D53 544 aa3.86□□□□□ -1.79
FOXN3-217ENST00000557572 HSPBAP1Q96EW2 488 aa3.86□□□□□ -1.79
FOXN3-217ENST00000557572 FAXDC2Q96IV6 333 aa3.86□□□□□ -1.79
FOXN3-217ENST00000557572 TAAR9Q96RI9 348 aa3.86□□□□□ -1.79
FOXN3-217ENST00000557572 TBCBQ99426 244 aa3.86□□□□□ -1.79
FOXN3-217ENST00000557572 SEZ6LQ9BYH1 1024 aa3.86□□□□□ -1.79
FOXN3-217ENST00000557572 LDAHQ9H6V9 325 aa3.86□□□□□ -1.79
FOXN3-217ENST00000557572 SH3GLB2Q9NR46 395 aa3.86□□□□□ -1.79
FOXN3-217ENST00000557572 C1orf112Q9NSG2 853 aa3.86□□□□□ -1.79
FOXN3-217ENST00000557572 SMC4Q9NTJ3 1288 aa3.86□□□□□ -1.79
FOXN3-217ENST00000557572 EHD3Q9NZN3 535 aa3.86□□□□□ -1.79
FOXN3-217ENST00000557572 JKAMPQ9P055 326 aa3.86□□□□□ -1.79
FOXN3-217ENST00000557572 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.86□□□□□ -1.79
FOXN3-217ENST00000557572 TPCN1Q9ULQ1 816 aa3.86□□□□□ -1.79
FOXN3-217ENST00000557572 LRRFIP2Q9Y608 721 aaKnown RBP3.86□□□□□ -1.79
FOXN3-217ENST00000557572 TTC36A6NLP5 189 aa3.85□□□□□ -1.79
FOXN3-217ENST00000557572 ADAM10O14672 748 aa3.85□□□□□ -1.79
FOXN3-217ENST00000557572 TPP1O14773 563 aa3.85□□□□□ -1.79
FOXN3-217ENST00000557572 AP1G1O43747 822 aa3.85□□□□□ -1.79
FOXN3-217ENST00000557572 CTNND1O60716 968 aaKnown RBP3.85□□□□□ -1.79
FOXN3-217ENST00000557572 TMCC2O75069 709 aa3.85□□□□□ -1.79
FOXN3-217ENST00000557572 INMTO95050 263 aa3.85□□□□□ -1.79
FOXN3-217ENST00000557572 MBD4O95243 580 aa3.85□□□□□ -1.79
FOXN3-217ENST00000557572 ZFXP17010 805 aaPredicted RBP3.85□□□□□ -1.79
FOXN3-217ENST00000557572 OAS2P29728 719 aaKnown RBP3.85□□□□□ -1.79
FOXN3-217ENST00000557572 SLC6A4P31645 630 aa3.85□□□□□ -1.79
FOXN3-217ENST00000557572 GRK6P43250 576 aa3.85□□□□□ -1.79
FOXN3-217ENST00000557572 MTNR1BP49286 362 aa3.85□□□□□ -1.79
FOXN3-217ENST00000557572 BMPR2Q13873 1038 aa3.85□□□□□ -1.79
FOXN3-217ENST00000557572 PABPC1LQ4VXU2 614 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms