RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 P2RY2P41231 377 aa14.99□□□□□ -0.01
SLIRP-210ENST00000557431 KIR2DL1P43626 348 aaPredicted RBP14.99□□□□□ -0.01
SLIRP-210ENST00000557431 CDH8P55286 799 aa14.99□□□□□ -0.01
SLIRP-210ENST00000557431 MYL6P60660 151 aa14.99□□□□□ -0.01
SLIRP-210ENST00000557431 MRPS21P82921 87 aaKnown RBP14.99□□□□□ -0.01
SLIRP-210ENST00000557431 ORC1Q13415 861 aa14.99□□□□□ -0.01
SLIRP-210ENST00000557431 SLC39A14Q15043 492 aa14.99□□□□□ -0.01
SLIRP-210ENST00000557431 E2F4Q16254 413 aa14.99□□□□□ -0.01
SLIRP-210ENST00000557431 SNRNP35Q16560 246 aaKnown RBP14.99□□□□□ -0.01
SLIRP-210ENST00000557431 WDR72Q3MJ13 1102 aa14.99□□□□□ -0.01
SLIRP-210ENST00000557431 TRIM61Q5EBN2 209 aa14.99□□□□□ -0.01
SLIRP-210ENST00000557431 TDRD10Q5VZ19 366 aaKnown RBP14.99□□□□□ -0.01
SLIRP-210ENST00000557431 SCAMP5Q8TAC9 235 aa14.99□□□□□ -0.01
SLIRP-210ENST00000557431 FBXO32Q969P5 355 aa14.99□□□□□ -0.01
SLIRP-210ENST00000557431 DHX58Q96C10 678 aa14.99□□□□□ -0.01
SLIRP-210ENST00000557431 ZFRQ96KR1 1074 aaKnown RBP14.99□□□□□ -0.01
SLIRP-210ENST00000557431 C8orf48Q96LL4 319 aa14.99□□□□□ -0.01
SLIRP-210ENST00000557431 KCNK16Q96T55 309 aa14.99□□□□□ -0.01
SLIRP-210ENST00000557431 CGRRF1Q99675 332 aa14.99□□□□□ -0.01
SLIRP-210ENST00000557431 CCSER2Q9H7U1 834 aa14.99□□□□□ -0.01
SLIRP-210ENST00000557431 UPF2Q9HAU5 1272 aaKnown RBP14.99□□□□□ -0.01
SLIRP-210ENST00000557431 AGPAT3Q9NRZ7 376 aa14.99□□□□□ -0.01
SLIRP-210ENST00000557431 NUMA1Q14980 2115 aa14.99□□□□□ -0.01
SLIRP-210ENST00000557431 MAP3K13O43283 966 aa14.98□□□□□ -0.01
SLIRP-210ENST00000557431 COCHO43405 550 aa14.98□□□□□ -0.01
SLIRP-210ENST00000557431 PGFP49763 221 aa14.98□□□□□ -0.01
SLIRP-210ENST00000557431 PDE6CP51160 858 aa14.98□□□□□ -0.01
SLIRP-210ENST00000557431 TNNC1P63316 161 aa14.98□□□□□ -0.01
SLIRP-210ENST00000557431 NOP14P78316 857 aaKnown RBP14.98□□□□□ -0.01
SLIRP-210ENST00000557431 CYP24A1Q07973 514 aa14.98□□□□□ -0.01
SLIRP-210ENST00000557431 STK38Q15208 465 aa14.98□□□□□ -0.01
SLIRP-210ENST00000557431 SURF1Q15526 300 aa14.98□□□□□ -0.01
SLIRP-210ENST00000557431 MAPRE1Q15691 268 aaKnown RBP14.98□□□□□ -0.01
SLIRP-210ENST00000557431 FOXD4L5Q5VV16 416 aaPredicted RBP14.98□□□□□ -0.01
SLIRP-210ENST00000557431 BBS7Q8IWZ6 715 aa14.98□□□□□ -0.01
SLIRP-210ENST00000557431 PHTF2Q8N3S3 785 aa14.98□□□□□ -0.01
SLIRP-210ENST00000557431 OR2I1PQ8NGU4 316 aa14.98□□□□□ -0.01
SLIRP-210ENST00000557431 PLEKHO2Q8TD55 490 aa14.98□□□□□ -0.01
SLIRP-210ENST00000557431 FOXD4L4Q8WXT5 416 aaPredicted RBP14.98□□□□□ -0.01
SLIRP-210ENST00000557431 SCNM1Q9BWG6 230 aa14.98□□□□□ -0.01
SLIRP-210ENST00000557431 TMEM121BQ9BXQ6 578 aaPredicted RBP14.98□□□□□ -0.01
SLIRP-210ENST00000557431 TRIM9Q9C026 710 aa14.98□□□□□ -0.01
SLIRP-210ENST00000557431 SDCBP2Q9H190 292 aa14.98□□□□□ -0.01
SLIRP-210ENST00000557431 BLZF1Q9H2G9 400 aa14.98□□□□□ -0.01
SLIRP-210ENST00000557431 CD93Q9NPY3 652 aa14.98□□□□□ -0.01
SLIRP-210ENST00000557431 TFIP11Q9UBB9 837 aaKnown RBP14.98□□□□□ -0.01
SLIRP-210ENST00000557431 WASF3Q9UPY6 502 aa14.98□□□□□ -0.01
SLIRP-210ENST00000557431 FAM208BQ5VWN6 2430 aa14.98□□□□□ -0.01
SLIRP-210ENST00000557431 KIAA0391O15091 583 aaKnown RBP14.97□□□□□ -0.01
SLIRP-210ENST00000557431 TACC1O75410 805 aa14.97□□□□□ -0.01
SLIRP-210ENST00000557431 HOXB3P14651 431 aaPredicted RBP14.97□□□□□ -0.01
SLIRP-210ENST00000557431 ITPKAP23677 461 aa14.97□□□□□ -0.01
SLIRP-210ENST00000557431 YWHAQP27348 245 aa14.97□□□□□ -0.01
SLIRP-210ENST00000557431 PSMD6Q15008 389 aa14.97□□□□□ -0.01
SLIRP-210ENST00000557431 MAP7D1Q3KQU3 841 aa14.97□□□□□ -0.01
SLIRP-210ENST00000557431 FAM26FQ5R3K3 315 aa14.97□□□□□ -0.01
SLIRP-210ENST00000557431 PAQR9Q6ZVX9 377 aa14.97□□□□□ -0.01
SLIRP-210ENST00000557431 EPM2AIP1Q7L775 607 aaPredicted RBP14.97□□□□□ -0.01
SLIRP-210ENST00000557431 FAM35AQ86V20 835 aa14.97□□□□□ -0.01
SLIRP-210ENST00000557431 MIB1Q86YT6 1006 aa14.97□□□□□ -0.01
SLIRP-210ENST00000557431 NUP93Q8N1F7 819 aa14.97□□□□□ -0.01
SLIRP-210ENST00000557431 B3GALNT2Q8NCR0 500 aa14.97□□□□□ -0.01
SLIRP-210ENST00000557431 WHAMMQ8TF30 809 aa14.97□□□□□ -0.01
SLIRP-210ENST00000557431 SLITRK1Q96PX8 696 aa14.97□□□□□ -0.01
SLIRP-210ENST00000557431 MED10Q9BTT4 135 aa14.97□□□□□ -0.01
SLIRP-210ENST00000557431 ADAM33Q9BZ11 813 aa14.97□□□□□ -0.01
SLIRP-210ENST00000557431 ELOVL4Q9GZR5 314 aa14.97□□□□□ -0.01
SLIRP-210ENST00000557431 TNMDQ9H2S6 317 aa14.97□□□□□ -0.01
SLIRP-210ENST00000557431 GMIPQ9P107 970 aa14.97□□□□□ -0.01
SLIRP-210ENST00000557431 HCN2Q9UL51 889 aa14.97□□□□□ -0.01
SLIRP-210ENST00000557431 CEP295Q9C0D2 2601 aa14.97□□□□□ -0.01
SLIRP-210ENST00000557431 CHD6Q8TD26 2715 aa14.96□□□□□ -0.01
SLIRP-210ENST00000557431 SPAARA0A1B0GVQ0 90 aa14.96□□□□□ -0.01
SLIRP-210ENST00000557431 HYAL3O43820 417 aaPredicted RBP14.96□□□□□ -0.01
SLIRP-210ENST00000557431 ALDH1A2O94788 518 aa14.96□□□□□ -0.01
SLIRP-210ENST00000557431 ADH1CP00326 375 aa14.96□□□□□ -0.01
SLIRP-210ENST00000557431 CCDC130P13994 396 aa14.96□□□□□ -0.01
SLIRP-210ENST00000557431 ENGP17813 658 aa14.96□□□□□ -0.01
SLIRP-210ENST00000557431 PFKLP17858 780 aa14.96□□□□□ -0.01
SLIRP-210ENST00000557431 PDCP20941 246 aa14.96□□□□□ -0.01
SLIRP-210ENST00000557431 TRPC3Q13507 836 aa14.96□□□□□ -0.01
SLIRP-210ENST00000557431 CKAP5Q14008 2032 aa14.96□□□□□ -0.01
SLIRP-210ENST00000557431 ANO4Q32M45 955 aa14.96□□□□□ -0.01
SLIRP-210ENST00000557431 FOXD4L6Q3SYB3 417 aaPredicted RBP14.96□□□□□ -0.01
SLIRP-210ENST00000557431 EOGTQ5NDL2 527 aa14.96□□□□□ -0.01
SLIRP-210ENST00000557431 FOXD4L3Q6VB84 417 aaPredicted RBP14.96□□□□□ -0.01
SLIRP-210ENST00000557431 STXBP4Q6ZWJ1 553 aa14.96□□□□□ -0.01
SLIRP-210ENST00000557431 LPCAT2Q7L5N7 544 aa14.96□□□□□ -0.01
SLIRP-210ENST00000557431 ZNF507Q8TCN5 953 aa14.96□□□□□ -0.01
SLIRP-210ENST00000557431 SCFD1Q8WVM8 642 aa14.96□□□□□ -0.01
SLIRP-210ENST00000557431 SPACA7Q96KW9 195 aa14.96□□□□□ -0.01
SLIRP-210ENST00000557431 ACOX2Q99424 681 aa14.96□□□□□ -0.01
SLIRP-210ENST00000557431 XYLT2Q9H1B5 865 aa14.96□□□□□ -0.01
SLIRP-210ENST00000557431 SLC6A17Q9H1V8 727 aa14.96□□□□□ -0.01
SLIRP-210ENST00000557431 POLMQ9NP87 494 aaPredicted RBP14.96□□□□□ -0.01
SLIRP-210ENST00000557431 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.96□□□□□ -0.016e-11■■■■■ 34.8
SLIRP-210ENST00000557431 KBTBD4Q9NVX7 518 aa14.96□□□□□ -0.01
SLIRP-210ENST00000557431 SH3BP1Q9Y3L3 701 aa14.96□□□□□ -0.01
SLIRP-210ENST00000557431 AKAP13Q12802 2813 aa14.96□□□□□ -0.02
SLIRP-210ENST00000557431 ADAMTS20P59510 1910 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms