RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 SCAMP5Q8TAC9 235 aa16.86■□□□□ 0.29
TUBB3-213ENST00000557262 TAF4BQ92750 862 aa16.86■□□□□ 0.29
TUBB3-213ENST00000557262 ELMO3Q96BJ8 720 aa16.86■□□□□ 0.29
TUBB3-213ENST00000557262 SMARCD1Q96GM5 515 aa16.86■□□□□ 0.29
TUBB3-213ENST00000557262 SPATA32Q96LK8 384 aa16.86■□□□□ 0.29
TUBB3-213ENST00000557262 DMAP1Q9NPF5 467 aaPredicted RBP16.86■□□□□ 0.29
TUBB3-213ENST00000557262 A0A0A0MRY4 1105 aa16.85■□□□□ 0.29
TUBB3-213ENST00000557262 E2F8A0AVK6 867 aa16.85■□□□□ 0.29
TUBB3-213ENST00000557262 COCHO43405 550 aa16.85■□□□□ 0.29
TUBB3-213ENST00000557262 RHOBTB1O94844 696 aa16.85■□□□□ 0.29
TUBB3-213ENST00000557262 KIF20AO95235 890 aa16.85■□□□□ 0.29
TUBB3-213ENST00000557262 EIF2DP41214 584 aaKnown RBP16.85■□□□□ 0.29
TUBB3-213ENST00000557262 SLC6A11P48066 632 aa16.85■□□□□ 0.29
TUBB3-213ENST00000557262 DGKEP52429 567 aa16.85■□□□□ 0.29
TUBB3-213ENST00000557262 MRPS21P82921 87 aaKnown RBP16.85■□□□□ 0.29
TUBB3-213ENST00000557262 SF3A2Q15428 464 aaKnown RBP16.85■□□□□ 0.29
TUBB3-213ENST00000557262 CCDC6Q16204 474 aa16.85■□□□□ 0.29
TUBB3-213ENST00000557262 PLA2G2CQ5R387 149 aa16.85■□□□□ 0.29
TUBB3-213ENST00000557262 CEP135Q66GS9 1140 aa16.85■□□□□ 0.29
TUBB3-213ENST00000557262 SCARA5Q6ZMJ2 495 aa16.85■□□□□ 0.29
TUBB3-213ENST00000557262 FUKQ8N0W3 1084 aa16.85■□□□□ 0.29
TUBB3-213ENST00000557262 TSTD1Q8NFU3 115 aa16.85■□□□□ 0.29
TUBB3-213ENST00000557262 PNKPQ96T60 521 aa16.85■□□□□ 0.29
TUBB3-213ENST00000557262 DUSP15Q9H1R2 295 aaPredicted RBP16.85■□□□□ 0.29
TUBB3-213ENST00000557262 TRAF3IP3Q9Y228 551 aa16.85■□□□□ 0.29
TUBB3-213ENST00000557262 HPSEQ9Y251 543 aa16.85■□□□□ 0.29
TUBB3-213ENST00000557262 FRMD4BQ9Y2L6 1034 aa16.85■□□□□ 0.29
TUBB3-213ENST00000557262 SPAG17Q6Q759 2223 aa16.84■□□□□ 0.29
TUBB3-213ENST00000557262 FAM92AA1XBS5 289 aa16.84■□□□□ 0.29
TUBB3-213ENST00000557262 SCAMP3O14828 347 aaKnown RBP16.84■□□□□ 0.29
TUBB3-213ENST00000557262 DCLK1O15075 740 aa16.84■□□□□ 0.29
TUBB3-213ENST00000557262 CALUO43852 315 aaPredicted RBP16.84■□□□□ 0.29
TUBB3-213ENST00000557262 AP1G2O75843 785 aa16.84■□□□□ 0.29
TUBB3-213ENST00000557262 ADH1CP00326 375 aa16.84■□□□□ 0.29
TUBB3-213ENST00000557262 LIMK1P53667 647 aa16.84■□□□□ 0.29
TUBB3-213ENST00000557262 SLC5A3P53794 718 aa16.84■□□□□ 0.29
TUBB3-213ENST00000557262 SEC13P55735 322 aa16.84■□□□□ 0.29
TUBB3-213ENST00000557262 ELF2Q15723 593 aa16.84■□□□□ 0.29
TUBB3-213ENST00000557262 USP39Q53GS9 565 aaKnown RBP16.84■□□□□ 0.29
TUBB3-213ENST00000557262 PPM1JQ5JR12 505 aa16.84■□□□□ 0.29
TUBB3-213ENST00000557262 UNC93AQ86WB7 457 aa16.84■□□□□ 0.29
TUBB3-213ENST00000557262 CCDC33Q8N5R6 958 aa16.84■□□□□ 0.29
TUBB3-213ENST00000557262 DDX1Q92499 740 aaKnown RBP16.84■□□□□ 0.29
TUBB3-213ENST00000557262 CCDC47Q96A33 483 aaKnown RBP16.84■□□□□ 0.29
TUBB3-213ENST00000557262 OTUB2Q96DC9 234 aa16.84■□□□□ 0.29
TUBB3-213ENST00000557262 MMP17Q9ULZ9 603 aa16.84■□□□□ 0.29
TUBB3-213ENST00000557262 HELZP42694 1942 aaKnown RBP16.84■□□□□ 0.29
TUBB3-213ENST00000557262 MAPK13O15264 365 aa16.83■□□□□ 0.28
TUBB3-213ENST00000557262 ASS1P00966 412 aaKnown RBP16.83■□□□□ 0.28
TUBB3-213ENST00000557262 APODP05090 189 aa16.83■□□□□ 0.28
TUBB3-213ENST00000557262 ZDHHC11BP0C7U3 371 aa16.83■□□□□ 0.28
TUBB3-213ENST00000557262 MPLP40238 635 aa16.83■□□□□ 0.28
TUBB3-213ENST00000557262 SYKP43405 635 aa16.83■□□□□ 0.28
TUBB3-213ENST00000557262 TUBP50607 506 aa16.83■□□□□ 0.28
TUBB3-213ENST00000557262 NDST1P52848 882 aa16.83■□□□□ 0.28
TUBB3-213ENST00000557262 KRT85P78386 507 aa16.83■□□□□ 0.28
TUBB3-213ENST00000557262 CRY1Q16526 586 aa16.83■□□□□ 0.28
TUBB3-213ENST00000557262 IL31Q6EBC2 164 aa16.83■□□□□ 0.28
TUBB3-213ENST00000557262 ZMIZ2Q8NF64 920 aa16.83■□□□□ 0.28
TUBB3-213ENST00000557262 ZFRQ96KR1 1074 aaKnown RBP16.83■□□□□ 0.28
TUBB3-213ENST00000557262 SMOQ99835 787 aa16.83■□□□□ 0.28
TUBB3-213ENST00000557262 CCSER2Q9H7U1 834 aa16.83■□□□□ 0.28
TUBB3-213ENST00000557262 CSNK1G1Q9HCP0 422 aa16.83■□□□□ 0.28
TUBB3-213ENST00000557262 VPS45Q9NRW7 570 aa16.83■□□□□ 0.28
TUBB3-213ENST00000557262 KRT82Q9NSB4 513 aa16.83■□□□□ 0.28
TUBB3-213ENST00000557262 SH3BP1Q9Y3L3 701 aa16.83■□□□□ 0.28
TUBB3-213ENST00000557262 FAM237AA0A1B0GTK4 181 aa16.82■□□□□ 0.28
TUBB3-213ENST00000557262 ANTXRLA6NF34 631 aa16.82■□□□□ 0.28
TUBB3-213ENST00000557262 BEST1O76090 585 aa16.82■□□□□ 0.28
TUBB3-213ENST00000557262 RHOBTB3O94955 611 aa16.82■□□□□ 0.28
TUBB3-213ENST00000557262 KAT7O95251 611 aa16.82■□□□□ 0.28
TUBB3-213ENST00000557262 HLA-DRAP01903 254 aa16.82■□□□□ 0.28
TUBB3-213ENST00000557262 ADRB1P08588 477 aa16.82■□□□□ 0.28
TUBB3-213ENST00000557262 ADH5P11766 374 aa16.82■□□□□ 0.28
TUBB3-213ENST00000557262 CCDC130P13994 396 aa16.82■□□□□ 0.28
TUBB3-213ENST00000557262 TRIM21P19474 475 aaKnown RBP16.82■□□□□ 0.28
TUBB3-213ENST00000557262 GRIA2P42262 883 aa16.82■□□□□ 0.28
TUBB3-213ENST00000557262 TNFRSF4P43489 277 aa16.82■□□□□ 0.28
TUBB3-213ENST00000557262 VAMP7P51809 220 aa16.82■□□□□ 0.28
TUBB3-213ENST00000557262 GAD2Q05329 585 aa16.82■□□□□ 0.28
TUBB3-213ENST00000557262 HSF5Q4G112 596 aaPredicted RBP16.82■□□□□ 0.28
TUBB3-213ENST00000557262 LY6G5CQ5SRR4 150 aa16.82■□□□□ 0.28
TUBB3-213ENST00000557262 C1orf220Q5T0J3 134 aa16.82■□□□□ 0.28
TUBB3-213ENST00000557262 C11orf74Q86VG3 221 aa16.82■□□□□ 0.28
TUBB3-213ENST00000557262 RASSF3Q86WH2 238 aa16.82■□□□□ 0.28
TUBB3-213ENST00000557262 SLC2A14Q8TDB8 520 aa16.82■□□□□ 0.28
TUBB3-213ENST00000557262 DUSP9Q99956 384 aaKnown RBP16.82■□□□□ 0.28
TUBB3-213ENST00000557262 FBXO44Q9H4M3 255 aa16.82■□□□□ 0.28
TUBB3-213ENST00000557262 GMIPQ9P107 970 aa16.82■□□□□ 0.28
TUBB3-213ENST00000557262 INVSQ9Y283 1065 aa16.82■□□□□ 0.28
TUBB3-213ENST00000557262 ZDHHC9Q9Y397 364 aa16.82■□□□□ 0.28
TUBB3-213ENST00000557262 EML5Q05BV3 1969 aa16.81■□□□□ 0.28
TUBB3-213ENST00000557262 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.81■□□□□ 0.28
TUBB3-213ENST00000557262 TM4SF5O14894 197 aa16.81■□□□□ 0.28
TUBB3-213ENST00000557262 GBP1P32455 592 aa16.81■□□□□ 0.28
TUBB3-213ENST00000557262 TIE1P35590 1138 aa16.81■□□□□ 0.28
TUBB3-213ENST00000557262 PIK3CAP42336 1068 aa16.81■□□□□ 0.28
TUBB3-213ENST00000557262 ASPAP45381 313 aa16.81■□□□□ 0.28
TUBB3-213ENST00000557262 NDUFA8P51970 172 aa16.81■□□□□ 0.28
TUBB3-213ENST00000557262 MAP3K7CLP57077 242 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms