RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 SCN4BQ8IWT1 228 aa13.43□□□□□ -0.26
PSEN1-220ENST00000557037 SNX19Q92543 992 aa13.43□□□□□ -0.26
PSEN1-220ENST00000557037 FAM117AQ9C073 453 aa13.43□□□□□ -0.26
PSEN1-220ENST00000557037 RNF38Q9H0F5 515 aa13.43□□□□□ -0.26
PSEN1-220ENST00000557037 TMEM60Q9H2L4 133 aa13.43□□□□□ -0.26
PSEN1-220ENST00000557037 WSB2Q9NYS7 404 aaPredicted RBP13.43□□□□□ -0.26
PSEN1-220ENST00000557037 DEC1Q9P2X7 70 aa13.43□□□□□ -0.26
PSEN1-220ENST00000557037 NFE2L3Q9Y4A8 694 aa13.43□□□□□ -0.26
PSEN1-220ENST00000557037 CPQQ9Y646 472 aa13.43□□□□□ -0.26
PSEN1-220ENST00000557037 SPTBN1Q01082 2364 aaKnown RBP13.43□□□□□ -0.26
PSEN1-220ENST00000557037 METTL12A8MUP2 240 aa13.42□□□□□ -0.26
PSEN1-220ENST00000557037 H0Y8X5 98 aa13.42□□□□□ -0.26
PSEN1-220ENST00000557037 PIRO00625 290 aa13.42□□□□□ -0.26
PSEN1-220ENST00000557037 ENC1O14682 589 aa13.42□□□□□ -0.26
PSEN1-220ENST00000557037 HIP1RO75146 1068 aa13.42□□□□□ -0.26
PSEN1-220ENST00000557037 RFPL3O75679 317 aa13.42□□□□□ -0.26
PSEN1-220ENST00000557037 GP1BBP13224 206 aa13.42□□□□□ -0.26
PSEN1-220ENST00000557037 RPS6KB1P23443 525 aa13.42□□□□□ -0.26
PSEN1-220ENST00000557037 CCT8P50990 548 aa13.42□□□□□ -0.26
PSEN1-220ENST00000557037 MCL1Q07820 350 aa13.42□□□□□ -0.26
PSEN1-220ENST00000557037 NFATC3Q12968 1075 aa13.42□□□□□ -0.26
PSEN1-220ENST00000557037 STRN3Q13033 797 aa13.42□□□□□ -0.26
PSEN1-220ENST00000557037 STK3Q13188 491 aa13.42□□□□□ -0.26
PSEN1-220ENST00000557037 NFE2Q16621 373 aaPredicted RBP13.42□□□□□ -0.26
PSEN1-220ENST00000557037 C6orf132Q5T0Z8 1188 aa13.42□□□□□ -0.26
PSEN1-220ENST00000557037 JADE1Q6IE81 842 aa13.42□□□□□ -0.26
PSEN1-220ENST00000557037 LAYNQ6UX15 382 aa13.42□□□□□ -0.26
PSEN1-220ENST00000557037 ETFBKMTQ8IXQ9 262 aa13.42□□□□□ -0.26
PSEN1-220ENST00000557037 DAW1Q8N136 415 aa13.42□□□□□ -0.26
PSEN1-220ENST00000557037 C1orf216Q8TAB5 229 aa13.42□□□□□ -0.26
PSEN1-220ENST00000557037 AGXT2Q9BYV1 514 aa13.42□□□□□ -0.26
PSEN1-220ENST00000557037 RPF1Q9H9Y2 349 aaKnown RBP13.42□□□□□ -0.26
PSEN1-220ENST00000557037 KCNK4Q9NYG8 393 aa13.42□□□□□ -0.26
PSEN1-220ENST00000557037 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.42□□□□□ -0.26
PSEN1-220ENST00000557037 NUMA1Q14980 2115 aa13.42□□□□□ -0.26
PSEN1-220ENST00000557037 TCHHQ07283 1943 aa13.41□□□□□ -0.26
PSEN1-220ENST00000557037 SFI1A8K8P3 1242 aa13.41□□□□□ -0.26
PSEN1-220ENST00000557037 KCNJ18B7U540 433 aa13.41□□□□□ -0.26
PSEN1-220ENST00000557037 PCDHGA12O60330 932 aa13.41□□□□□ -0.26
PSEN1-220ENST00000557037 ACAT1P24752 427 aaKnown RBP13.41□□□□□ -0.26
PSEN1-220ENST00000557037 RPA1P27694 616 aa13.41□□□□□ -0.26
PSEN1-220ENST00000557037 PDE6CP51160 858 aa13.41□□□□□ -0.26
PSEN1-220ENST00000557037 GAD2Q05329 585 aa13.41□□□□□ -0.26
PSEN1-220ENST00000557037 ECM1Q16610 540 aa13.41□□□□□ -0.26
PSEN1-220ENST00000557037 KIAA1614Q5VZ46 1190 aa13.41□□□□□ -0.26
PSEN1-220ENST00000557037 BTBD8Q5XKL5 378 aa13.41□□□□□ -0.26
PSEN1-220ENST00000557037 TERB1Q8NA31 727 aa13.41□□□□□ -0.26
PSEN1-220ENST00000557037 ZNF248Q8NDW4 579 aa13.41□□□□□ -0.26
PSEN1-220ENST00000557037 CADM4Q8NFZ8 388 aa13.41□□□□□ -0.26
PSEN1-220ENST00000557037 ERMNQ8TAM6 284 aa13.41□□□□□ -0.26
PSEN1-220ENST00000557037 GABRG3Q99928 467 aa13.41□□□□□ -0.26
PSEN1-220ENST00000557037 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.41□□□□□ -0.26
PSEN1-220ENST00000557037 RBM19Q9Y4C8 960 aaKnown RBP13.41□□□□□ -0.26
PSEN1-220ENST00000557037 PCDHGA1Q9Y5H4 931 aa13.41□□□□□ -0.26
PSEN1-220ENST00000557037 E2F8A0AVK6 867 aa13.4□□□□□ -0.26
PSEN1-220ENST00000557037 WASH3PC4AMC7 463 aa13.4□□□□□ -0.26
PSEN1-220ENST00000557037 TERTO14746 1132 aaKnown RBP13.4□□□□□ -0.26
PSEN1-220ENST00000557037 ABL1P00519 1130 aa13.4□□□□□ -0.26
PSEN1-220ENST00000557037 PAX3P23760 479 aa13.4□□□□□ -0.26
PSEN1-220ENST00000557037 AFF3P51826 1226 aaKnown RBP13.4□□□□□ -0.26
PSEN1-220ENST00000557037 UCNP55089 124 aa13.4□□□□□ -0.26
PSEN1-220ENST00000557037 EVCP57679 992 aa13.4□□□□□ -0.26
PSEN1-220ENST00000557037 SLC7A9P82251 487 aa13.4□□□□□ -0.26
PSEN1-220ENST00000557037 NFKB2Q00653 900 aa13.4□□□□□ -0.26
PSEN1-220ENST00000557037 PDIA5Q14554 519 aa13.4□□□□□ -0.26
PSEN1-220ENST00000557037 ANO4Q32M45 955 aa13.4□□□□□ -0.26
PSEN1-220ENST00000557037 INAVAQ3KP66 663 aa13.4□□□□□ -0.26
PSEN1-220ENST00000557037 FBXL19Q6PCT2 694 aa13.4□□□□□ -0.26
PSEN1-220ENST00000557037 ZNF574Q6ZN55 896 aaPredicted RBP13.4□□□□□ -0.26
PSEN1-220ENST00000557037 GATAD2AQ86YP4 633 aa13.4□□□□□ -0.26
PSEN1-220ENST00000557037 FBXL16Q8N461 479 aa13.4□□□□□ -0.26
PSEN1-220ENST00000557037 CNDP2Q96KP4 475 aaKnown RBP13.4□□□□□ -0.26
PSEN1-220ENST00000557037 TRPM5Q9NZQ8 1165 aa13.4□□□□□ -0.26
PSEN1-220ENST00000557037 ANKRD6Q9Y2G4 727 aa13.4□□□□□ -0.26
PSEN1-220ENST00000557037 ANO9A1A5B4 782 aa13.39□□□□□ -0.27
PSEN1-220ENST00000557037 LDOC1O95751 146 aaPredicted RBP13.39□□□□□ -0.27
PSEN1-220ENST00000557037 MYF5P13349 255 aa13.39□□□□□ -0.27
PSEN1-220ENST00000557037 XBP1P17861 261 aa13.39□□□□□ -0.27
PSEN1-220ENST00000557037 GRIK1P39086 918 aa13.39□□□□□ -0.27
PSEN1-220ENST00000557037 TAF6P49848 677 aa13.39□□□□□ -0.27
PSEN1-220ENST00000557037 PCBP4P57723 403 aaKnown RBP13.39□□□□□ -0.27
PSEN1-220ENST00000557037 USP46P62068 366 aa13.39□□□□□ -0.27
PSEN1-220ENST00000557037 VAC14Q08AM6 782 aa13.39□□□□□ -0.27
PSEN1-220ENST00000557037 TMEM132DQ14C87 1099 aa13.39□□□□□ -0.27
PSEN1-220ENST00000557037 KCNT1Q5JUK3 1230 aa13.39□□□□□ -0.27
PSEN1-220ENST00000557037 GRAMD4Q6IC98 578 aa13.39□□□□□ -0.27
PSEN1-220ENST00000557037 CPLX2Q6PUV4 134 aaKnown RBP13.39□□□□□ -0.27
PSEN1-220ENST00000557037 NUDT18Q6ZVK8 323 aa13.39□□□□□ -0.27
PSEN1-220ENST00000557037 FAM124AQ86V42 546 aa13.39□□□□□ -0.27
PSEN1-220ENST00000557037 CACUL1Q86Y37 369 aa13.39□□□□□ -0.27
PSEN1-220ENST00000557037 TSC1Q92574 1164 aa13.39□□□□□ -0.27
PSEN1-220ENST00000557037 TNFRSF25Q93038 417 aa13.39□□□□□ -0.27
PSEN1-220ENST00000557037 IGSF8Q969P0 613 aa13.39□□□□□ -0.27
PSEN1-220ENST00000557037 BICD1Q96G01 975 aa13.39□□□□□ -0.27
PSEN1-220ENST00000557037 RUSC1Q9BVN2 902 aa13.39□□□□□ -0.27
PSEN1-220ENST00000557037 ABCB6Q9NP58 842 aa13.39□□□□□ -0.27
PSEN1-220ENST00000557037 ITM2CQ9NQX7 267 aa13.39□□□□□ -0.27
PSEN1-220ENST00000557037 GTF3C4Q9UKN8 822 aa13.39□□□□□ -0.27
PSEN1-220ENST00000557037 STARD13Q9Y3M8 1113 aa13.39□□□□□ -0.27
PSEN1-220ENST00000557037 PCDHB6Q9Y5E3 794 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms