RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 RBM6P78332 1123 aaKnown RBP5.31□□□□□ -1.56
ATXN3-246ENST00000557030 NCBP1Q09161 790 aaKnown RBP5.31□□□□□ -1.56
ATXN3-246ENST00000557030 STX1AQ16623 288 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 ME3Q16798 604 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 TPD52L1Q16890 204 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-246ENST00000557030 PABPC1LQ4VXU2 614 aaKnown RBP5.31□□□□□ -1.56
ATXN3-246ENST00000557030 ZSCAN25Q6NSZ9 544 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 KSR2Q6VAB6 950 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 USP45Q70EL2 814 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 BRINP3Q76B58 766 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 TICAM2Q86XR7 235 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 CHPFQ8IZ52 775 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 C17orf53Q8N3J3 647 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-246ENST00000557030 LCORLQ8N3X6 602 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 ZNF397Q8NF99 534 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-246ENST00000557030 IL17RDQ8NFM7 739 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 BICD2Q8TD16 824 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 JPH3Q8WXH2 748 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-246ENST00000557030 MAP4K1Q92918 833 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 RGMAQ96B86 450 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 ZG16BQ96DA0 208 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 RNF31Q96EP0 1072 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 MARS2Q96GW9 593 aaKnown RBP5.31□□□□□ -1.56
ATXN3-246ENST00000557030 LRGUKQ96M69 825 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 CAMKK2Q96RR4 588 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 ALOXE3Q9BYJ1 711 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 IL25Q9H293 177 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 SLAMF7Q9NQ25 335 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 DACT1Q9NYF0 836 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 VSX1Q9NZR4 365 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-246ENST00000557030 DBF4Q9UBU7 674 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-246ENST00000557030 CLIP2Q9UDT6 1046 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 CTNNA3Q9UI47 895 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 ZNF180Q9UJW8 692 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 CFAP45Q9UL16 551 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 ANKRD6Q9Y2G4 727 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 PCDHA3Q9Y5H8 950 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 SCN11AQ9UI33 1791 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 MRC1P22897 1456 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 TNS3Q68CZ2 1445 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 C5P01031 1676 aa5.31□□□□□ -1.56
ATXN3-246ENST00000557030 SPATA31A3Q5VYP0 1347 aa5.3□□□□□ -1.56
ATXN3-246ENST00000557030 EP400Q96L91 3159 aa5.3□□□□□ -1.56
ATXN3-246ENST00000557030 AP5Z1O43299 807 aa5.3□□□□□ -1.56
ATXN3-246ENST00000557030 CCP110O43303 1012 aa5.3□□□□□ -1.56
ATXN3-246ENST00000557030 ERN1O75460 977 aaKnown RBP5.3□□□□□ -1.56
ATXN3-246ENST00000557030 AGFG2O95081 481 aa5.3□□□□□ -1.56
ATXN3-246ENST00000557030 LARGE1O95461 756 aa5.3□□□□□ -1.56
ATXN3-246ENST00000557030 ESRRBO95718 433 aa5.3□□□□□ -1.56
ATXN3-246ENST00000557030 MAP4K4O95819 1239 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-246ENST00000557030 MALP21145 153 aa5.3□□□□□ -1.56
ATXN3-246ENST00000557030 RPS6KB1P23443 525 aa5.3□□□□□ -1.56
ATXN3-246ENST00000557030 SMARCA1P28370 1054 aa5.3□□□□□ -1.56
ATXN3-246ENST00000557030 AVPR1BP47901 424 aa5.3□□□□□ -1.56
ATXN3-246ENST00000557030 SLC39A6Q13433 755 aa5.3□□□□□ -1.56
ATXN3-246ENST00000557030 SNAPC2Q13487 334 aa5.3□□□□□ -1.56
ATXN3-246ENST00000557030 FLYWCH1Q4VC44 716 aa5.3□□□□□ -1.56
ATXN3-246ENST00000557030 IFIT1BQ5T764 474 aaKnown RBP5.3□□□□□ -1.56
ATXN3-246ENST00000557030 NAA16Q6N069 864 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-246ENST00000557030 CCDC73Q6ZRK6 1079 aa5.3□□□□□ -1.56
ATXN3-246ENST00000557030 ZNF771Q7L3S4 317 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-246ENST00000557030 LUZP1Q86V48 1076 aa5.3□□□□□ -1.56
ATXN3-246ENST00000557030 DNAJC10Q8IXB1 793 aa5.3□□□□□ -1.56
ATXN3-246ENST00000557030 GRAMD1CQ8IYS0 662 aa5.3□□□□□ -1.56
ATXN3-246ENST00000557030 KRT222Q8N1A0 295 aa5.3□□□□□ -1.56
ATXN3-246ENST00000557030 SH2D3CQ8N5H7 860 aa5.3□□□□□ -1.56
ATXN3-246ENST00000557030 NLGN4YQ8NFZ3 816 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-246ENST00000557030 ERO1AQ96HE7 468 aa5.3□□□□□ -1.56
ATXN3-246ENST00000557030 KAZALD1Q96I82 304 aa5.3□□□□□ -1.56
ATXN3-246ENST00000557030 SUCLG2Q96I99 432 aa5.3□□□□□ -1.56
ATXN3-246ENST00000557030 ZNF396Q96N95 335 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-246ENST00000557030 LLPHQ9BRT6 129 aaKnown RBP5.3□□□□□ -1.56
ATXN3-246ENST00000557030 NAT10Q9H0A0 1025 aaKnown RBP5.3□□□□□ -1.56
ATXN3-246ENST00000557030 GALNT9Q9HCQ5 603 aa5.3□□□□□ -1.56
ATXN3-246ENST00000557030 TCF7L1Q9HCS4 588 aa5.3□□□□□ -1.56
ATXN3-246ENST00000557030 DDX21Q9NR30 783 aaKnown RBP eCLIP5.3□□□□□ -1.56
ATXN3-246ENST00000557030 MAN1C1Q9NR34 630 aa5.3□□□□□ -1.56
ATXN3-246ENST00000557030 ANO10Q9NW15 660 aa5.3□□□□□ -1.56
ATXN3-246ENST00000557030 CALCOCO1Q9P1Z2 691 aa5.3□□□□□ -1.56
ATXN3-246ENST00000557030 ZHX1Q9UKY1 873 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-246ENST00000557030 TPCN1Q9ULQ1 816 aa5.3□□□□□ -1.56
ATXN3-246ENST00000557030 SLC45A2Q9UMX9 530 aa5.3□□□□□ -1.56
ATXN3-246ENST00000557030 MTO1Q9Y2Z2 717 aaKnown RBP5.3□□□□□ -1.56
ATXN3-246ENST00000557030 MORC2Q9Y6X9 1032 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-246ENST00000557030 AHDC1Q5TGY3 1603 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-246ENST00000557030 CPDO75976 1380 aa5.29□□□□□ -1.56
ATXN3-246ENST00000557030 PLEKHG2Q9H7P9 1386 aa5.29□□□□□ -1.56
ATXN3-246ENST00000557030 GLI3P10071 1580 aa5.29□□□□□ -1.56
ATXN3-246ENST00000557030 PKD1L3Q7Z443 1732 aa5.29□□□□□ -1.56
ATXN3-246ENST00000557030 BECN2A8MW95 431 aa5.29□□□□□ -1.56
ATXN3-246ENST00000557030 H3BQV1 296 aa5.29□□□□□ -1.56
ATXN3-246ENST00000557030 RFPL1O75677 317 aa5.29□□□□□ -1.56
ATXN3-246ENST00000557030 DDX58O95786 925 aaKnown RBP5.29□□□□□ -1.56
ATXN3-246ENST00000557030 GPANK1O95872 356 aa5.29□□□□□ -1.56
ATXN3-246ENST00000557030 IGKV5-2P06315 115 aa5.29□□□□□ -1.56
ATXN3-246ENST00000557030 FCER1AP12319 257 aa5.29□□□□□ -1.56
ATXN3-246ENST00000557030 BMP5P22003 454 aa5.29□□□□□ -1.56
ATXN3-246ENST00000557030 U2AF2P26368 475 aaKnown RBP eCLIP5.29□□□□□ -1.56
ATXN3-246ENST00000557030 VAV2P52735 878 aa5.29□□□□□ -1.56
ATXN3-246ENST00000557030 TPM4P67936 248 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms