RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 SCUBE3Q8IX30 993 aa24.93■■□□□ 1.58
SIX4-203ENST00000556952 SIX6OS1Q8N1H7 587 aa24.93■■□□□ 1.58
SIX4-203ENST00000556952 NIPA2Q8N8Q9 360 aa24.93■■□□□ 1.58
SIX4-203ENST00000556952 SPPL2BQ8TCT7 592 aa24.93■■□□□ 1.58
SIX4-203ENST00000556952 HES6Q96HZ4 224 aa24.93■■□□□ 1.58
SIX4-203ENST00000556952 KCNK16Q96T55 309 aa24.93■■□□□ 1.58
SIX4-203ENST00000556952 RHOBTB2Q9BYZ6 727 aa24.93■■□□□ 1.58
SIX4-203ENST00000556952 L2HGDHQ9H9P8 463 aa24.93■■□□□ 1.58
SIX4-203ENST00000556952 ABI2Q9NYB9 513 aaPredicted RBP24.93■■□□□ 1.58
SIX4-203ENST00000556952 HHLA1C9JL84 531 aa24.93■■□□□ 1.58
SIX4-203ENST00000556952 NCK2O43639 380 aa24.93■■□□□ 1.58
SIX4-203ENST00000556952 URODP06132 367 aa24.93■■□□□ 1.58
SIX4-203ENST00000556952 COMTP21964 271 aa24.93■■□□□ 1.58
SIX4-203ENST00000556952 PIGHQ14442 188 aaPredicted RBP24.93■■□□□ 1.58
SIX4-203ENST00000556952 SLC26A9Q7LBE3 791 aa24.93■■□□□ 1.58
SIX4-203ENST00000556952 ARCQ7LC44 396 aa24.93■■□□□ 1.58
SIX4-203ENST00000556952 POF1BQ8WVV4 589 aa24.93■■□□□ 1.58
SIX4-203ENST00000556952 TMEM59LQ9UK28 342 aa24.93■■□□□ 1.58
SIX4-203ENST00000556952 MRFAP1Q9Y605 127 aa24.93■■□□□ 1.58
SIX4-203ENST00000556952 TRIM66O15016 1216 aa24.92■■□□□ 1.58
SIX4-203ENST00000556952 SPOPO43791 374 aa24.92■■□□□ 1.58
SIX4-203ENST00000556952 RFC1P35251 1148 aaPredicted RBP24.92■■□□□ 1.58
SIX4-203ENST00000556952 RSPO2Q6UXX9 243 aaPredicted RBP24.92■■□□□ 1.58
SIX4-203ENST00000556952 JOSD2Q8TAC2 188 aa24.92■■□□□ 1.58
SIX4-203ENST00000556952 CNGB3Q9NQW8 809 aa24.92■■□□□ 1.58
SIX4-203ENST00000556952 CDC23Q9UJX2 597 aa24.92■■□□□ 1.58
SIX4-203ENST00000556952 PACSIN2Q9UNF0 486 aaPredicted RBP24.92■■□□□ 1.58
SIX4-203ENST00000556952 CDY1Q9Y6F8 540 aa24.92■■□□□ 1.58
SIX4-203ENST00000556952 MTMR11A4FU01 709 aa24.91■■□□□ 1.58
SIX4-203ENST00000556952 SART1O43290 800 aaKnown RBP24.91■■□□□ 1.58
SIX4-203ENST00000556952 POU3F3P20264 500 aaPredicted RBP24.91■■□□□ 1.58
SIX4-203ENST00000556952 CYP2F1P24903 491 aa24.91■■□□□ 1.58
SIX4-203ENST00000556952 TKTL1P51854 596 aa24.91■■□□□ 1.58
SIX4-203ENST00000556952 CDR1P51861 262 aa24.91■■□□□ 1.58
SIX4-203ENST00000556952 EFHC1Q5JVL4 640 aa24.91■■□□□ 1.58
SIX4-203ENST00000556952 PIWIL1Q96J94 861 aaKnown RBP24.91■■□□□ 1.58
SIX4-203ENST00000556952 OSBPL9Q96SU4 736 aa24.91■■□□□ 1.58
SIX4-203ENST00000556952 ASNSD1Q9NWL6 643 aa24.91■■□□□ 1.58
SIX4-203ENST00000556952 F8VP50 259 aa24.9■■□□□ 1.58
SIX4-203ENST00000556952 GRIK1P39086 918 aa24.9■■□□□ 1.58
SIX4-203ENST00000556952 CREMQ03060 361 aa24.9■■□□□ 1.58
SIX4-203ENST00000556952 ADCY1Q08828 1119 aa24.9■■□□□ 1.58
SIX4-203ENST00000556952 ZNF252P-AS1Q0IIN9 211 aa24.9■■□□□ 1.58
SIX4-203ENST00000556952 ACAP1Q15027 740 aa24.9■■□□□ 1.58
SIX4-203ENST00000556952 VPS52Q8N1B4 723 aa24.9■■□□□ 1.58
SIX4-203ENST00000556952 SCML4Q8N228 414 aa24.9■■□□□ 1.58
SIX4-203ENST00000556952 UBL4BQ8N7F7 174 aa24.9■■□□□ 1.58
SIX4-203ENST00000556952 CD101Q93033 1021 aa24.9■■□□□ 1.58
SIX4-203ENST00000556952 MRPL38Q96DV4 380 aaKnown RBP24.9■■□□□ 1.58
SIX4-203ENST00000556952 C8orf48Q96LL4 319 aa24.9■■□□□ 1.58
SIX4-203ENST00000556952 SSX2IPQ9Y2D8 614 aa24.9■■□□□ 1.58
SIX4-203ENST00000556952 CCDC66A2RUB6 948 aa24.89■■□□□ 1.58
SIX4-203ENST00000556952 CES2O00748 559 aa24.89■■□□□ 1.58
SIX4-203ENST00000556952 GLI1P08151 1106 aa24.89■■□□□ 1.58
SIX4-203ENST00000556952 CTNNA2P26232 953 aa24.89■■□□□ 1.58
SIX4-203ENST00000556952 IRS1P35568 1242 aa24.89■■□□□ 1.58
SIX4-203ENST00000556952 ARPP19P56211 112 aa24.89■■□□□ 1.58
SIX4-203ENST00000556952 MRPS5P82675 430 aaKnown RBP24.89■■□□□ 1.58
SIX4-203ENST00000556952 ROR1Q01973 937 aa24.89■■□□□ 1.58
SIX4-203ENST00000556952 OGDHQ02218 1023 aa24.89■■□□□ 1.58
SIX4-203ENST00000556952 PTPROQ16827 1216 aa24.89■■□□□ 1.58
SIX4-203ENST00000556952 MICALL1Q8N3F8 863 aa24.89■■□□□ 1.58
SIX4-203ENST00000556952 PGLYRP2Q96PD5 576 aa24.89■■□□□ 1.58
SIX4-203ENST00000556952 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.89■■□□□ 1.58
SIX4-203ENST00000556952 MYO16Q9Y6X6 1858 aa24.89■■□□□ 1.58
SIX4-203ENST00000556952 C2CD4BA6NLJ0 364 aa24.88■■□□□ 1.57
SIX4-203ENST00000556952 C2CD2LO14523 706 aa24.88■■□□□ 1.57
SIX4-203ENST00000556952 HSF2BPO75031 334 aa24.88■■□□□ 1.57
SIX4-203ENST00000556952 GPD1P21695 349 aa24.88■■□□□ 1.57
SIX4-203ENST00000556952 PSMA2P25787 234 aa24.88■■□□□ 1.57
SIX4-203ENST00000556952 CTNNA1P35221 906 aaKnown RBP24.88■■□□□ 1.57
SIX4-203ENST00000556952 ZNF143P52747 638 aaPredicted RBP24.88■■□□□ 1.57
SIX4-203ENST00000556952 RNF19BQ6ZMZ0 732 aa24.88■■□□□ 1.57
SIX4-203ENST00000556952 GPRIN1Q7Z2K8 1008 aa24.88■■□□□ 1.57
SIX4-203ENST00000556952 EMC1Q8N766 993 aa24.88■■□□□ 1.57
SIX4-203ENST00000556952 CLEC4CQ8WTT0 213 aa24.88■■□□□ 1.57
SIX4-203ENST00000556952 KHSRPQ92945 711 aaKnown RBP eCLIP24.88■■□□□ 1.57
SIX4-203ENST00000556952 LMAN2LQ9H0V9 348 aa24.88■■□□□ 1.57
SIX4-203ENST00000556952 ZBP1Q9H171 429 aa24.88■■□□□ 1.57
SIX4-203ENST00000556952 MRPL17Q9NRX2 175 aaKnown RBP24.88■■□□□ 1.57
SIX4-203ENST00000556952 WDR27A2RRH5 827 aa24.88■■□□□ 1.57
SIX4-203ENST00000556952 DPYSL4O14531 572 aa24.88■■□□□ 1.57
SIX4-203ENST00000556952 DDX3YO15523 660 aaKnown RBP24.88■■□□□ 1.57
SIX4-203ENST00000556952 DESP17661 470 aa24.88■■□□□ 1.57
SIX4-203ENST00000556952 DAOAP59103 153 aa24.88■■□□□ 1.57
SIX4-203ENST00000556952 ERVFC1P60507 584 aa24.88■■□□□ 1.57
SIX4-203ENST00000556952 UBE3AQ05086 875 aa24.88■■□□□ 1.57
SIX4-203ENST00000556952 WHAMMP3Q1A5X7 153 aa24.88■■□□□ 1.57
SIX4-203ENST00000556952 IRGQQ8WZA9 623 aa24.88■■□□□ 1.57
SIX4-203ENST00000556952 CLSTN3Q9BQT9 956 aa24.88■■□□□ 1.57
SIX4-203ENST00000556952 ULBP1Q9BZM6 244 aa24.88■■□□□ 1.57
SIX4-203ENST00000556952 LMCD1Q9NZU5 365 aa24.88■■□□□ 1.57
SIX4-203ENST00000556952 LZTS1Q9Y250 596 aa24.88■■□□□ 1.57
SIX4-203ENST00000556952 PLXNA3P51805 1871 aa24.88■■□□□ 1.57
SIX4-203ENST00000556952 SPTBN5Q9NRC6 3674 aaKnown RBP24.88■■□□□ 1.57
SIX4-203ENST00000556952 ZBED1O96006 694 aa24.87■■□□□ 1.57
SIX4-203ENST00000556952 OR1D2P34982 312 aa24.87■■□□□ 1.57
SIX4-203ENST00000556952 FLT3P36888 993 aa24.87■■□□□ 1.57
SIX4-203ENST00000556952 RNASE9P60153 205 aaKnown RBP24.87■■□□□ 1.57
SIX4-203ENST00000556952 TPGS2Q68CL5 300 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms