RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 SIT1Q9Y3P8 196 aa14.89□□□□□ -0.03
SLIRP-207ENST00000556831 PIAS3Q9Y6X2 628 aa14.89□□□□□ -0.03
SLIRP-207ENST00000556831 KANSL1LA0AUZ9 987 aa14.88□□□□□ -0.03
SLIRP-207ENST00000556831 C2orf78A6NCI8 922 aa14.88□□□□□ -0.03
SLIRP-207ENST00000556831 ZNF840PA6NDX5 716 aa14.88□□□□□ -0.03
SLIRP-207ENST00000556831 KRT5P13647 590 aa14.88□□□□□ -0.03
SLIRP-207ENST00000556831 ACO1P21399 889 aaKnown RBP14.88□□□□□ -0.03
SLIRP-207ENST00000556831 CD72P21854 359 aa14.88□□□□□ -0.03
SLIRP-207ENST00000556831 IFNAR2P48551 515 aa14.88□□□□□ -0.03
SLIRP-207ENST00000556831 BCAT1P54687 386 aa14.88□□□□□ -0.03
SLIRP-207ENST00000556831 MFAP3P55082 362 aa14.88□□□□□ -0.03
SLIRP-207ENST00000556831 EXOC3L4Q17RC7 722 aa14.88□□□□□ -0.03
SLIRP-207ENST00000556831 GOLGA7BQ2TAP0 167 aa14.88□□□□□ -0.03
SLIRP-207ENST00000556831 HSP90AA4PQ58FG1 418 aa14.88□□□□□ -0.03
SLIRP-207ENST00000556831 RRAGAQ7L523 313 aa14.88□□□□□ -0.03
SLIRP-207ENST00000556831 ENOSF1Q7L5Y1 443 aa14.88□□□□□ -0.03
SLIRP-207ENST00000556831 DDX42Q86XP3 938 aaKnown RBP eCLIP14.88□□□□□ -0.03
SLIRP-207ENST00000556831 SCAMP5Q8TAC9 235 aa14.88□□□□□ -0.03
SLIRP-207ENST00000556831 USP13Q92995 863 aaPredicted RBP14.88□□□□□ -0.03
SLIRP-207ENST00000556831 EXOC4Q96A65 974 aa14.88□□□□□ -0.03
SLIRP-207ENST00000556831 NAT10Q9H0A0 1025 aaKnown RBP14.88□□□□□ -0.03
SLIRP-207ENST00000556831 TRPV5Q9NQA5 729 aa14.88□□□□□ -0.03
SLIRP-207ENST00000556831 NFE2L3Q9Y4A8 694 aa14.88□□□□□ -0.03
SLIRP-207ENST00000556831 ANAPC1Q9H1A4 1944 aa14.88□□□□□ -0.03
SLIRP-207ENST00000556831 MYO16Q9Y6X6 1858 aa14.87□□□□□ -0.03
SLIRP-207ENST00000556831 GTPBP10A4D1E9 387 aaKnown RBP14.87□□□□□ -0.03
SLIRP-207ENST00000556831 KCNJ18B7U540 433 aa14.87□□□□□ -0.03
SLIRP-207ENST00000556831 PAEPP09466 180 aa14.87□□□□□ -0.03
SLIRP-207ENST00000556831 MBL2P11226 248 aaPredicted RBP14.87□□□□□ -0.03
SLIRP-207ENST00000556831 VDRP11473 427 aa14.87□□□□□ -0.03
SLIRP-207ENST00000556831 GLULP15104 373 aa14.87□□□□□ -0.03
SLIRP-207ENST00000556831 EEF1GP26641 437 aaKnown RBP14.87□□□□□ -0.03
SLIRP-207ENST00000556831 STARD6P59095 220 aa14.87□□□□□ -0.03
SLIRP-207ENST00000556831 AMPD2Q01433 879 aa14.87□□□□□ -0.03
SLIRP-207ENST00000556831 GOLGA8FQ08AF8 430 aa14.87□□□□□ -0.03
SLIRP-207ENST00000556831 GOLGA8DPQ0D2H9 430 aa14.87□□□□□ -0.03
SLIRP-207ENST00000556831 KCNJ12Q14500 433 aa14.87□□□□□ -0.03
SLIRP-207ENST00000556831 MTF1Q14872 753 aa14.87□□□□□ -0.03
SLIRP-207ENST00000556831 PDGFRLQ15198 375 aa14.87□□□□□ -0.03
SLIRP-207ENST00000556831 STILQ15468 1287 aa14.87□□□□□ -0.03
SLIRP-207ENST00000556831 HECTD3Q5T447 861 aa14.87□□□□□ -0.03
SLIRP-207ENST00000556831 ARHGAP17Q68EM7 881 aa14.87□□□□□ -0.03
SLIRP-207ENST00000556831 RBM43Q6ZSC3 357 aaKnown RBP14.87□□□□□ -0.03
SLIRP-207ENST00000556831 TADA2BQ86TJ2 420 aa14.87□□□□□ -0.03
SLIRP-207ENST00000556831 RBBP8NLQ8NC74 664 aaPredicted RBP14.87□□□□□ -0.03
SLIRP-207ENST00000556831 PJA1Q8NG27 643 aa14.87□□□□□ -0.03
SLIRP-207ENST00000556831 SH3RF2Q8TEC5 729 aa14.87□□□□□ -0.03
SLIRP-207ENST00000556831 ZFYVE19Q96K21 471 aa14.87□□□□□ -0.03
SLIRP-207ENST00000556831 SLC22A12Q96S37 553 aa14.87□□□□□ -0.03
SLIRP-207ENST00000556831 CYP2S1Q96SQ9 504 aa14.87□□□□□ -0.03
SLIRP-207ENST00000556831 NELL2Q99435 816 aa14.87□□□□□ -0.03
SLIRP-207ENST00000556831 TUBGCP2Q9BSJ2 902 aa14.87□□□□□ -0.03
SLIRP-207ENST00000556831 CRACR2AQ9BSW2 395 aa14.87□□□□□ -0.03
SLIRP-207ENST00000556831 C8orf33Q9H7E9 229 aaPredicted RBP14.87□□□□□ -0.03
SLIRP-207ENST00000556831 UBE2TQ9NPD8 197 aaPredicted RBP14.87□□□□□ -0.03
SLIRP-207ENST00000556831 FAM86C1Q9NVL1 165 aa14.87□□□□□ -0.03
SLIRP-207ENST00000556831 GMIPQ9P107 970 aa14.87□□□□□ -0.03
SLIRP-207ENST00000556831 TSPAN16Q9UKR8 245 aa14.87□□□□□ -0.03
SLIRP-207ENST00000556831 ARHGAP26Q9UNA1 814 aa14.87□□□□□ -0.03
SLIRP-207ENST00000556831 CCL26Q9Y258 94 aa14.87□□□□□ -0.03
SLIRP-207ENST00000556831 MTF2Q9Y483 593 aaPredicted RBP14.87□□□□□ -0.03
SLIRP-207ENST00000556831 KIF26AQ9ULI4 1882 aaPredicted RBP14.86□□□□□ -0.03
SLIRP-207ENST00000556831 FAM208BQ5VWN6 2430 aa14.86□□□□□ -0.03
SLIRP-207ENST00000556831 TNFRSF10BO14763 440 aa14.86□□□□□ -0.03
SLIRP-207ENST00000556831 BEST1O76090 585 aa14.86□□□□□ -0.03
SLIRP-207ENST00000556831 PSEN1P49768 467 aa14.86□□□□□ -0.03
SLIRP-207ENST00000556831 TUBP50607 506 aa14.86□□□□□ -0.03
SLIRP-207ENST00000556831 BST2Q10589 180 aaKnown RBP14.86□□□□□ -0.03
SLIRP-207ENST00000556831 ITPRIPL2Q3MIP1 535 aa14.86□□□□□ -0.03
SLIRP-207ENST00000556831 CAVIN1Q6NZI2 390 aaKnown RBP14.86□□□□□ -0.03
SLIRP-207ENST00000556831 TRIM65Q6PJ69 517 aa14.86□□□□□ -0.03
SLIRP-207ENST00000556831 DGLUCYQ7Z3D6 616 aa14.86□□□□□ -0.03
SLIRP-207ENST00000556831 ARHGEF19Q8IW93 802 aa14.86□□□□□ -0.03
SLIRP-207ENST00000556831 ARHGAP18Q8N392 663 aa14.86□□□□□ -0.03
SLIRP-207ENST00000556831 CPA6Q8N4T0 437 aa14.86□□□□□ -0.03
SLIRP-207ENST00000556831 ANKRD52Q8NB46 1076 aa14.86□□□□□ -0.03
SLIRP-207ENST00000556831 ZMIZ2Q8NF64 920 aa14.86□□□□□ -0.03
SLIRP-207ENST00000556831 TTC8Q8TAM2 541 aa14.86□□□□□ -0.03
SLIRP-207ENST00000556831 ENOX1Q8TC92 643 aaKnown RBP14.86□□□□□ -0.03
SLIRP-207ENST00000556831 ATP2A3Q93084 1043 aa14.86□□□□□ -0.03
SLIRP-207ENST00000556831 MED15Q96RN5 788 aa14.86□□□□□ -0.03
SLIRP-207ENST00000556831 NDST4Q9H3R1 872 aa14.86□□□□□ -0.03
SLIRP-207ENST00000556831 LRRC4Q9HBW1 653 aa14.86□□□□□ -0.03
SLIRP-207ENST00000556831 DUS2Q9NX74 493 aaKnown RBP14.86□□□□□ -0.03
SLIRP-207ENST00000556831 CHORDC1Q9UHD1 332 aaPredicted RBP14.86□□□□□ -0.03
SLIRP-207ENST00000556831 PATJQ8NI35 1801 aa14.86□□□□□ -0.03
SLIRP-207ENST00000556831 FASNP49327 2511 aaKnown RBP14.86□□□□□ -0.03
SLIRP-207ENST00000556831 PRR23AA6NEV1 266 aa14.85□□□□□ -0.03
SLIRP-207ENST00000556831 FAM170BA6NMN3 283 aa14.85□□□□□ -0.03
SLIRP-207ENST00000556831 ARNTLO00327 626 aa14.85□□□□□ -0.03
SLIRP-207ENST00000556831 SLC9A3R1O14745 358 aaPredicted RBP14.85□□□□□ -0.03
SLIRP-207ENST00000556831 DCNP07585 359 aaKnown RBP14.85□□□□□ -0.03
SLIRP-207ENST00000556831 SETSIPP0DME0 302 aa14.85□□□□□ -0.03
SLIRP-207ENST00000556831 USP8P40818 1118 aa14.85□□□□□ -0.03
SLIRP-207ENST00000556831 MAGEA9P43362 315 aa14.85□□□□□ -0.03
SLIRP-207ENST00000556831 MYL5Q02045 173 aa14.85□□□□□ -0.03
SLIRP-207ENST00000556831 USP4Q13107 963 aa14.85□□□□□ -0.03
SLIRP-207ENST00000556831 NR1H3Q13133 447 aa14.85□□□□□ -0.03
SLIRP-207ENST00000556831 VWA3BQ502W6 1294 aa14.85□□□□□ -0.03
SLIRP-207ENST00000556831 ASCL5Q7RTU5 278 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms