RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 CTNND2Q9UQB3 1225 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 CFAP54Q96N23 3096 aa10.94□□□□□ -0.66
SHMT2-224ENST00000556737 BIN1O00499 593 aa10.93□□□□□ -0.66
SHMT2-224ENST00000556737 COCHO43405 550 aa10.93□□□□□ -0.66
SHMT2-224ENST00000556737 FAM200BP0CF97 657 aa10.93□□□□□ -0.66
SHMT2-224ENST00000556737 PDE6CP51160 858 aa10.93□□□□□ -0.66
SHMT2-224ENST00000556737 SATB1Q01826 763 aa10.93□□□□□ -0.66
SHMT2-224ENST00000556737 CSTF1Q05048 431 aaKnown RBP10.93□□□□□ -0.66
SHMT2-224ENST00000556737 STIM1Q13586 685 aa10.93□□□□□ -0.66
SHMT2-224ENST00000556737 LRRC32Q14392 662 aa10.93□□□□□ -0.66
SHMT2-224ENST00000556737 CAMK4Q16566 473 aa10.93□□□□□ -0.66
SHMT2-224ENST00000556737 GAB4Q2WGN9 574 aa10.93□□□□□ -0.66
SHMT2-224ENST00000556737 TMEM196Q5HYL7 178 aa10.93□□□□□ -0.66
SHMT2-224ENST00000556737 PPP1R26Q5T8A7 1209 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-224ENST00000556737 KLHL10Q6JEL2 608 aa10.93□□□□□ -0.66
SHMT2-224ENST00000556737 FSTL4Q6MZW2 842 aa10.93□□□□□ -0.66
SHMT2-224ENST00000556737 PKN3Q6P5Z2 889 aa10.93□□□□□ -0.66
SHMT2-224ENST00000556737 TSSK4Q6SA08 328 aa10.93□□□□□ -0.66
SHMT2-224ENST00000556737 MAMSTRQ6ZN01 415 aa10.93□□□□□ -0.66
SHMT2-224ENST00000556737 UBR7Q8N806 425 aa10.93□□□□□ -0.66
SHMT2-224ENST00000556737 SLC4A11Q8NBS3 891 aa10.93□□□□□ -0.66
SHMT2-224ENST00000556737 ZBTB44Q8NCP5 570 aa10.93□□□□□ -0.66
SHMT2-224ENST00000556737 NELFBQ8WX92 580 aa10.93□□□□□ -0.66
SHMT2-224ENST00000556737 EZH1Q92800 747 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-224ENST00000556737 TATDN2Q93075 761 aa10.93□□□□□ -0.66
SHMT2-224ENST00000556737 NKD2Q969F2 451 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-224ENST00000556737 ECT2Q9H8V3 914 aa10.93□□□□□ -0.66
SHMT2-224ENST00000556737 C2orf42Q9NWW7 574 aa10.93□□□□□ -0.66
SHMT2-224ENST00000556737 COMMD8Q9NX08 183 aa10.93□□□□□ -0.66
SHMT2-224ENST00000556737 DUS2Q9NX74 493 aaKnown RBP10.93□□□□□ -0.66
SHMT2-224ENST00000556737 CPQQ9Y646 472 aa10.93□□□□□ -0.66
SHMT2-224ENST00000556737 FRYLO94915 3013 aa10.93□□□□□ -0.66
SHMT2-224ENST00000556737 TRDMT1O14717 391 aaKnown RBP10.92□□□□□ -0.66
SHMT2-224ENST00000556737 PMM2O15305 246 aa10.92□□□□□ -0.66
SHMT2-224ENST00000556737 LILRB5O75023 590 aa10.92□□□□□ -0.66
SHMT2-224ENST00000556737 PAPSS2O95340 614 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-224ENST00000556737 GJA4P35212 333 aa10.92□□□□□ -0.66
SHMT2-224ENST00000556737 IFNAR2P48551 515 aa10.92□□□□□ -0.66
SHMT2-224ENST00000556737 FMO5P49326 533 aa10.92□□□□□ -0.66
SHMT2-224ENST00000556737 TUBP50607 506 aa10.92□□□□□ -0.66
SHMT2-224ENST00000556737 RAD23BP54727 409 aa10.92□□□□□ -0.66
SHMT2-224ENST00000556737 PAK1Q13153 545 aa10.92□□□□□ -0.66
SHMT2-224ENST00000556737 CUL2Q13617 745 aa10.92□□□□□ -0.66
SHMT2-224ENST00000556737 ZNF394Q53GI3 561 aa10.92□□□□□ -0.66
SHMT2-224ENST00000556737 DGKKQ5KSL6 1271 aa10.92□□□□□ -0.66
SHMT2-224ENST00000556737 CC2D1AQ6P1N0 951 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-224ENST00000556737 FILIP1Q7Z7B0 1213 aa10.92□□□□□ -0.66
SHMT2-224ENST00000556737 SPEM1Q8N4L4 309 aa10.92□□□□□ -0.66
SHMT2-224ENST00000556737 CPA6Q8N4T0 437 aa10.92□□□□□ -0.66
SHMT2-224ENST00000556737 KIAA1958Q8N8K9 716 aa10.92□□□□□ -0.66
SHMT2-224ENST00000556737 CCDC150Q8NCX0 1101 aa10.92□□□□□ -0.66
SHMT2-224ENST00000556737 TTC16Q8NEE8 873 aa10.92□□□□□ -0.66
SHMT2-224ENST00000556737 ATP2A3Q93084 1043 aa10.92□□□□□ -0.66
SHMT2-224ENST00000556737 CYFIP2Q96F07 1278 aa10.92□□□□□ -0.66
SHMT2-224ENST00000556737 MED15Q96RN5 788 aa10.92□□□□□ -0.66
SHMT2-224ENST00000556737 FAM124BQ9H5Z6 455 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-224ENST00000556737 CCSER2Q9H7U1 834 aa10.92□□□□□ -0.66
SHMT2-224ENST00000556737 METTL14Q9HCE5 456 aaKnown RBP10.92□□□□□ -0.66
SHMT2-224ENST00000556737 FBRSL1Q9HCM7 1045 aaKnown RBP10.92□□□□□ -0.66
SHMT2-224ENST00000556737 PNPLA8Q9NP80 782 aa10.92□□□□□ -0.66
SHMT2-224ENST00000556737 OSER1Q9NX31 292 aa10.92□□□□□ -0.66
SHMT2-224ENST00000556737 SMPD4Q9NXE4 827 aa10.92□□□□□ -0.66
SHMT2-224ENST00000556737 TMEM63CQ9P1W3 806 aa10.92□□□□□ -0.66
SHMT2-224ENST00000556737 PCDHGA2Q9Y5H1 932 aa10.92□□□□□ -0.66
SHMT2-224ENST00000556737 ZNF292O60281 2723 aa10.92□□□□□ -0.66
SHMT2-224ENST00000556737 GVINP1Q7Z2Y8 2422 aa10.92□□□□□ -0.66
SHMT2-224ENST00000556737 SYCE3A1L190 88 aa10.91□□□□□ -0.66
SHMT2-224ENST00000556737 K7ESF4 209 aa10.91□□□□□ -0.66
SHMT2-224ENST00000556737 SCAMP3O14828 347 aaKnown RBP10.91□□□□□ -0.66
SHMT2-224ENST00000556737 CYP26A1O43174 497 aa10.91□□□□□ -0.66
SHMT2-224ENST00000556737 ABL1P00519 1130 aa10.91□□□□□ -0.66
SHMT2-224ENST00000556737 EGFP01133 1207 aa10.91□□□□□ -0.66
SHMT2-224ENST00000556737 CYP17A1P05093 508 aa10.91□□□□□ -0.66
SHMT2-224ENST00000556737 HOXC13P31276 330 aa10.91□□□□□ -0.66
SHMT2-224ENST00000556737 CCR3P51677 355 aa10.91□□□□□ -0.66
SHMT2-224ENST00000556737 MARSP56192 900 aaKnown RBP10.91□□□□□ -0.66
SHMT2-224ENST00000556737 STX17P56962 302 aa10.91□□□□□ -0.66
SHMT2-224ENST00000556737 DMWDQ09019 674 aa10.91□□□□□ -0.66
SHMT2-224ENST00000556737 ARHGAP17Q68EM7 881 aa10.91□□□□□ -0.66
SHMT2-224ENST00000556737 ZC3H14Q6PJT7 736 aaKnown RBP10.91□□□□□ -0.66
SHMT2-224ENST00000556737 TTC30AQ86WT1 665 aa10.91□□□□□ -0.66
SHMT2-224ENST00000556737 TRIM59Q8IWR1 403 aa10.91□□□□□ -0.66
SHMT2-224ENST00000556737 TTC39CQ8N584 583 aa10.91□□□□□ -0.66
SHMT2-224ENST00000556737 TRIML1Q8N9V2 468 aa10.91□□□□□ -0.66
SHMT2-224ENST00000556737 SUMF1Q8NBK3 374 aa10.91□□□□□ -0.66
SHMT2-224ENST00000556737 LMO3Q8TAP4 145 aa10.91□□□□□ -0.66
SHMT2-224ENST00000556737 WBP2Q969T9 261 aa10.91□□□□□ -0.66
SHMT2-224ENST00000556737 JAKMIP2Q96AA8 810 aa10.91□□□□□ -0.66
SHMT2-224ENST00000556737 TMEM176AQ96HP8 235 aa10.91□□□□□ -0.66
SHMT2-224ENST00000556737 DUSP16Q9BY84 665 aa10.91□□□□□ -0.66
SHMT2-224ENST00000556737 LINC00597Q9H2U6 94 aa10.91□□□□□ -0.66
SHMT2-224ENST00000556737 CLSTN2Q9H4D0 955 aa10.91□□□□□ -0.66
SHMT2-224ENST00000556737 NMUR1Q9HB89 426 aa10.91□□□□□ -0.66
SHMT2-224ENST00000556737 ZSCAN32Q9NX65 697 aa10.91□□□□□ -0.66
SHMT2-224ENST00000556737 KIAA1468Q9P260 1216 aa10.91□□□□□ -0.66
SHMT2-224ENST00000556737 CFAP97Q9P2B7 532 aa10.91□□□□□ -0.66
SHMT2-224ENST00000556737 CHORDC1Q9UHD1 332 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-224ENST00000556737 SCML2Q9UQR0 700 aa10.91□□□□□ -0.66
SHMT2-224ENST00000556737 OTOGLQ3ZCN5 2332 aa10.9□□□□□ -0.66
SHMT2-224ENST00000556737 BICDL2A1A5D9 508 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms