RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 CHFRQ96EP1 664 aa10.96□□□□□ -0.65
SNX6-208ENST00000556712 FAXDC2Q96IV6 333 aa10.96□□□□□ -0.65
SNX6-208ENST00000556712 KREMEN1Q96MU8 473 aa10.96□□□□□ -0.65
SNX6-208ENST00000556712 FAM83CQ9BQN1 747 aa10.96□□□□□ -0.65
SNX6-208ENST00000556712 CRACR2AQ9BSW2 395 aa10.96□□□□□ -0.65
SNX6-208ENST00000556712 DUSP16Q9BY84 665 aa10.96□□□□□ -0.65
SNX6-208ENST00000556712 THG1LQ9NWX6 298 aaKnown RBP10.96□□□□□ -0.65
SNX6-208ENST00000556712 OSER1Q9NX31 292 aa10.96□□□□□ -0.65
SNX6-208ENST00000556712 IL37Q9NZH6 218 aa10.96□□□□□ -0.65
SNX6-208ENST00000556712 TSPAN16Q9UKR8 245 aa10.96□□□□□ -0.65
SNX6-208ENST00000556712 ARHGAP26Q9UNA1 814 aa10.96□□□□□ -0.65
SNX6-208ENST00000556712 ARIH1Q9Y4X5 557 aaPredicted RBP10.96□□□□□ -0.65
SNX6-208ENST00000556712 PCDHB4Q9Y5E5 795 aa10.96□□□□□ -0.65
SNX6-208ENST00000556712 FAM92AA1XBS5 289 aa10.95□□□□□ -0.66
SNX6-208ENST00000556712 RNF225M0QZC1 329 aaPredicted RBP10.95□□□□□ -0.66
SNX6-208ENST00000556712 TULP2O00295 520 aa10.95□□□□□ -0.66
SNX6-208ENST00000556712 ZDHHC11BP0C7U3 371 aa10.95□□□□□ -0.66
SNX6-208ENST00000556712 PPP3CCP48454 512 aa10.95□□□□□ -0.66
SNX6-208ENST00000556712 IFNAR2P48551 515 aa10.95□□□□□ -0.66
SNX6-208ENST00000556712 PDE6CP51160 858 aa10.95□□□□□ -0.66
SNX6-208ENST00000556712 CETN1Q12798 172 aa10.95□□□□□ -0.66
SNX6-208ENST00000556712 RUNX3Q13761 415 aa10.95□□□□□ -0.66
SNX6-208ENST00000556712 PON2Q15165 354 aa10.95□□□□□ -0.66
SNX6-208ENST00000556712 ITPRIPL2Q3MIP1 535 aa10.95□□□□□ -0.66
SNX6-208ENST00000556712 CC2D1AQ6P1N0 951 aaPredicted RBP10.95□□□□□ -0.66
SNX6-208ENST00000556712 C11orf57Q6ZUT1 292 aaPredicted RBP10.95□□□□□ -0.66
SNX6-208ENST00000556712 TTC39CQ8N584 583 aa10.95□□□□□ -0.66
SNX6-208ENST00000556712 RBBP8NLQ8NC74 664 aaPredicted RBP10.95□□□□□ -0.66
SNX6-208ENST00000556712 EHBP1Q8NDI1 1231 aa10.95□□□□□ -0.66
SNX6-208ENST00000556712 OSCP1Q8WVF1 389 aa10.95□□□□□ -0.66
SNX6-208ENST00000556712 OVCA2Q8WZ82 227 aa10.95□□□□□ -0.66
SNX6-208ENST00000556712 TFAP2BQ92481 460 aa10.95□□□□□ -0.66
SNX6-208ENST00000556712 WBP2Q969T9 261 aa10.95□□□□□ -0.66
SNX6-208ENST00000556712 ZFRQ96KR1 1074 aaKnown RBP10.95□□□□□ -0.66
SNX6-208ENST00000556712 PRRX2Q99811 253 aa10.95□□□□□ -0.66
SNX6-208ENST00000556712 ZSWIM1Q9BR11 485 aa10.95□□□□□ -0.66
SNX6-208ENST00000556712 DNAI2Q9GZS0 605 aa10.95□□□□□ -0.66
SNX6-208ENST00000556712 LINC00597Q9H2U6 94 aa10.95□□□□□ -0.66
SNX6-208ENST00000556712 NMUR1Q9HB89 426 aa10.95□□□□□ -0.66
SNX6-208ENST00000556712 SAMSN1Q9NSI8 373 aaKnown RBP10.95□□□□□ -0.66
SNX6-208ENST00000556712 RBM12Q9NTZ6 932 aaKnown RBP10.95□□□□□ -0.66
SNX6-208ENST00000556712 DUS2Q9NX74 493 aaKnown RBP10.95□□□□□ -0.66
SNX6-208ENST00000556712 CFAP97Q9P2B7 532 aa10.95□□□□□ -0.66
SNX6-208ENST00000556712 DACH1Q9UI36 760 aa10.95□□□□□ -0.66
SNX6-208ENST00000556712 NUDT5Q9UKK9 219 aa10.95□□□□□ -0.66
SNX6-208ENST00000556712 A0A1W2PQH9 124 aa10.94□□□□□ -0.66
SNX6-208ENST00000556712 O00370 1275 aa10.94□□□□□ -0.66
SNX6-208ENST00000556712 MAN2B1O00754 1011 aa10.94□□□□□ -0.66
SNX6-208ENST00000556712 MDM4O15151 490 aa10.94□□□□□ -0.66
SNX6-208ENST00000556712 TBX18O95935 607 aa10.94□□□□□ -0.66
SNX6-208ENST00000556712 IRF1P10914 325 aa10.94□□□□□ -0.66
SNX6-208ENST00000556712 SLC9A1P19634 815 aa10.94□□□□□ -0.66
SNX6-208ENST00000556712 BRD2P25440 801 aaKnown RBP10.94□□□□□ -0.66
SNX6-208ENST00000556712 ERCC5P28715 1186 aaPredicted RBP10.94□□□□□ -0.66
SNX6-208ENST00000556712 KIF11P52732 1056 aa10.94□□□□□ -0.66
SNX6-208ENST00000556712 BCAT1P54687 386 aa10.94□□□□□ -0.66
SNX6-208ENST00000556712 SLC7A9P82251 487 aa10.94□□□□□ -0.66
SNX6-208ENST00000556712 PDE4CQ08493 712 aa10.94□□□□□ -0.66
SNX6-208ENST00000556712 FZD5Q13467 585 aa10.94□□□□□ -0.66
SNX6-208ENST00000556712 EML3Q32P44 896 aa10.94□□□□□ -0.66
SNX6-208ENST00000556712 SGO2Q562F6 1265 aa10.94□□□□□ -0.66
SNX6-208ENST00000556712 HECTD3Q5T447 861 aa10.94□□□□□ -0.66
SNX6-208ENST00000556712 Q6ZS52 159 aa10.94□□□□□ -0.66
SNX6-208ENST00000556712 RBM43Q6ZSC3 357 aaKnown RBP10.94□□□□□ -0.66
SNX6-208ENST00000556712 PIGZQ86VD9 579 aa10.94□□□□□ -0.66
SNX6-208ENST00000556712 RALGPS2Q86X27 583 aaPredicted RBP10.94□□□□□ -0.66
SNX6-208ENST00000556712 UBA3Q8TBC4 463 aa10.94□□□□□ -0.66
SNX6-208ENST00000556712 ATOH1Q92858 354 aaPredicted RBP10.94□□□□□ -0.66
SNX6-208ENST00000556712 OSBPL6Q9BZF3 934 aa10.94□□□□□ -0.66
SNX6-208ENST00000556712 FBXO44Q9H4M3 255 aa10.94□□□□□ -0.66
SNX6-208ENST00000556712 THAP9Q9H5L6 903 aa10.94□□□□□ -0.66
SNX6-208ENST00000556712 FAM124BQ9H5Z6 455 aaPredicted RBP10.94□□□□□ -0.66
SNX6-208ENST00000556712 C8orf33Q9H7E9 229 aaPredicted RBP10.94□□□□□ -0.66
SNX6-208ENST00000556712 PNPLA8Q9NP80 782 aa10.94□□□□□ -0.66
SNX6-208ENST00000556712 TLR8Q9NR97 1041 aaKnown RBP10.94□□□□□ -0.66
SNX6-208ENST00000556712 SPATA6Q9NWH7 488 aaPredicted RBP10.94□□□□□ -0.66
SNX6-208ENST00000556712 COMMD8Q9NX08 183 aa10.94□□□□□ -0.66
SNX6-208ENST00000556712 AJAP1Q9UKB5 411 aaPredicted RBP10.94□□□□□ -0.66
SNX6-208ENST00000556712 SCML2Q9UQR0 700 aa10.94□□□□□ -0.66
SNX6-208ENST00000556712 MRPS17Q9Y2R5 130 aaKnown RBP10.94□□□□□ -0.66
SNX6-208ENST00000556712 F5P12259 2224 aa10.94□□□□□ -0.66
SNX6-208ENST00000556712 MYOFQ9NZM1 2061 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 KCNJ18B7U540 433 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 M0QYV0 167 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 TLR5O60602 858 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 MBD3O95983 291 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 CHRNB1P11230 501 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 VDRP11473 427 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 KRT5P13647 590 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 TCF3P15923 654 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 PFKLP17858 780 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 TUBP50607 506 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 ZNF132P52740 706 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 NUBP1P53384 320 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 GCNT1Q02742 428 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 BST2Q10589 180 aaKnown RBP10.93□□□□□ -0.66
SNX6-208ENST00000556712 KCNJ12Q14500 433 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 PDGFRLQ15198 375 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 MAN2A1Q16706 1144 aa10.93□□□□□ -0.66
SNX6-208ENST00000556712 MIIPQ5JXC2 388 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms