RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 CACNG2Q9Y698 323 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 VPS8Q8N3P4 1428 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 EIF4G3O43432 1585 aaKnown RBP6.47□□□□□ -1.37
TDP1-215ENST00000556498 ADAMTS12P58397 1594 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 ACEP12821 1306 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 GRIN2AQ12879 1464 aa6.47□□□□□ -1.37
TDP1-215ENST00000556498 A0A087WZG4 1122 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 SMIM31A0A1B0GVY4 71 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 ARHGEF37A1IGU5 675 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 MAGEA13PA6NCF6 341 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 OR6C74A6NCV1 312 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 E9PBE3 544 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 FANCGO15287 622 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 ALOX15BO15296 676 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 GRIN3BO60391 1043 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 CIDEAO60543 219 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 SOCS5O75159 536 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 TOM1L1O75674 476 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 ATE1O95260 518 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 CHEK2O96017 543 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 APOA4P06727 396 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 RARBP10826 455 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 KRT3P12035 628 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 COL6A2P12110 1019 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 ATP2A2P16615 1042 aaKnown RBP6.46□□□□□ -1.38
TDP1-215ENST00000556498 MX1P20591 662 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 ITGAXP20702 1163 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 XPAP23025 273 aaPredicted RBP6.46□□□□□ -1.38
TDP1-215ENST00000556498 GNA11P29992 359 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 IDUAP35475 653 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 SOX5P35711 763 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 KRT2P35908 639 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 PPP1R2P41236 205 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 SCNN1GP51170 649 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 TKTL1P51854 596 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 NEK3P51956 506 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 RAP1GDS1P52306 607 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 IST1P53990 364 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 CHMP4BP1P59074 171 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 ETF1P62495 437 aaKnown RBP6.46□□□□□ -1.38
TDP1-215ENST00000556498 ELF3P78545 371 aaPredicted RBP6.46□□□□□ -1.38
TDP1-215ENST00000556498 IL1RL1Q01638 556 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 CLCQ05315 142 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 ZNF33BQ06732 778 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 MCL1Q07820 350 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 RALGDSQ12967 914 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 SGCGQ13326 291 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 ERV3-1Q14264 604 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 PPA1Q15181 289 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 CYTH1Q15438 398 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 GSTA3Q16772 222 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 UGP2Q16851 508 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 PLA2G4EQ3MJ16 856 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 PPM1JQ5JR12 505 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 C6orf183Q5T699 404 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 KCTD16Q68DU8 428 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 OR52E8Q6IFG1 317 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 PPP1R2P3Q6NXS1 205 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 DYMQ7RTS9 669 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 KDELC2Q7Z4H8 507 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 PATL1Q86TB9 770 aaKnown RBP6.46□□□□□ -1.38
TDP1-215ENST00000556498 DGKHQ86XP1 1220 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 WDR49Q8IV35 697 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 BBS5Q8N3I7 341 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 ZBTB38Q8NAP3 1195 aaPredicted RBP6.46□□□□□ -1.38
TDP1-215ENST00000556498 SPATA5Q8NB90 893 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 PLBD2Q8NHP8 589 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 AGR3Q8TD06 166 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 PLEKHO2Q8TD55 490 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 TUBGCP3Q96CW5 907 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 RMND5BQ96G75 393 aaPredicted RBP6.46□□□□□ -1.38
TDP1-215ENST00000556498 RADILQ96JH8 1075 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 DCAF5Q96JK2 942 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 CMTM3Q96MX0 182 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 VPS35Q96QK1 796 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 EIF2AK1Q9BQI3 630 aaKnown RBP6.46□□□□□ -1.38
TDP1-215ENST00000556498 NTPCRQ9BSD7 190 aaKnown RBP6.46□□□□□ -1.38
TDP1-215ENST00000556498 TBCDQ9BTW9 1192 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 CINPQ9BW66 212 aaPredicted RBP6.46□□□□□ -1.38
TDP1-215ENST00000556498 SPATA16Q9BXB7 569 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 OSBPL6Q9BZF3 934 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 KCNN2Q9H2S1 579 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 ATXN3LQ9H3M9 355 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 EPB41L1Q9H4G0 881 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 THAP9Q9H5L6 903 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 C10orf88Q9H8K7 445 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 TRIM45Q9H8W5 580 aaPredicted RBP6.46□□□□□ -1.38
TDP1-215ENST00000556498 SP140LQ9H930 580 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 ALG13Q9NP73 1137 aaKnown RBP6.46□□□□□ -1.38
TDP1-215ENST00000556498 MRPL40Q9NQ50 206 aaKnown RBP6.46□□□□□ -1.38
TDP1-215ENST00000556498 FANCLQ9NW38 375 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 ARHGEF38Q9NXL2 777 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 MCM9Q9NXL9 1143 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 GIN1Q9NXP7 522 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 STMN3Q9NZ72 180 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 IMPACTQ9P2X3 320 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 KLHL3Q9UH77 587 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 GTF2IRD1Q9UHL9 959 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 BAIAP2L1Q9UHR4 511 aa6.46□□□□□ -1.38
TDP1-215ENST00000556498 AP4E1Q9UPM8 1137 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms