RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 SALL3Q9BXA9 1300 aa4.46□□□□□ -1.69
ATXN3-240ENST00000556339 LAMA3Q16787 3333 aa4.46□□□□□ -1.69
ATXN3-240ENST00000556339 PCSK5Q92824 1860 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 PLIN4Q96Q06 1357 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 LOC102724159A0A0B4J2E5 919 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 B4E1Z4 1266 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 IFIT3O14879 490 aaKnown RBP4.46□□□□□ -1.7
ATXN3-240ENST00000556339 ZNF500O60304 480 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-240ENST00000556339 MFAP3LO75121 409 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 OFD1O75665 1012 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 GH1P01241 217 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 CASTP20810 708 aaKnown RBP4.46□□□□□ -1.7
ATXN3-240ENST00000556339 MSNP26038 577 aaKnown RBP4.46□□□□□ -1.7
ATXN3-240ENST00000556339 SDHAP31040 664 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 ADCY7P51828 1080 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 MRPS5P82675 430 aaKnown RBP4.46□□□□□ -1.7
ATXN3-240ENST00000556339 ALDH6A1Q02252 535 aaKnown RBP4.46□□□□□ -1.7
ATXN3-240ENST00000556339 ROM1Q03395 351 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 TRAF1Q13077 416 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 SART3Q15020 963 aaKnown RBP4.46□□□□□ -1.7
ATXN3-240ENST00000556339 PWP2Q15269 919 aaKnown RBP4.46□□□□□ -1.7
ATXN3-240ENST00000556339 CDC37Q16543 378 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-240ENST00000556339 PTGISQ16647 500 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 DGKDQ16760 1214 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 LY6KQ17RY6 165 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 ASPRV1Q53RT3 343 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 FKBP15Q5T1M5 1219 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 TMEM63BQ5T3F8 832 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 IFIT1BQ5T764 474 aaKnown RBP4.46□□□□□ -1.7
ATXN3-240ENST00000556339 FSTL4Q6MZW2 842 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 SLC30A10Q6XR72 485 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 RASGRP2Q7LDG7 609 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 ZNF589Q86UQ0 364 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-240ENST00000556339 DHX37Q8IY37 1157 aaKnown RBP4.46□□□□□ -1.7
ATXN3-240ENST00000556339 ADGRF4Q8IZF3 695 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 C7orf31Q8N865 590 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 SLC25A43Q8WUT9 341 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-240ENST00000556339 AFG1LQ8WV93 481 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 ATXN2LQ8WWM7 1075 aaKnown RBP4.46□□□□□ -1.7
ATXN3-240ENST00000556339 PIBF1Q8WXW3 757 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 TBC1D5Q92609 795 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 TAAR1Q96RJ0 339 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 IWS1Q96ST2 819 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 RMDN3Q96TC7 470 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 CCDC113Q9H0I3 377 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 CERS4Q9HA82 394 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 SFMBT1Q9UHJ3 866 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 NOL7Q9UMY1 257 aaKnown RBP4.46□□□□□ -1.7
ATXN3-240ENST00000556339 TET1Q8NFU7 2136 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 GRIN2DO15399 1336 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 ABCB11O95342 1321 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 UMODL1Q5DID0 1318 aa4.46□□□□□ -1.7
ATXN3-240ENST00000556339 GREB1LQ9C091 1923 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-240ENST00000556339 LTBP2Q14767 1821 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 UBE2QL1A1L167 161 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 GOLGA6L6A8MZA4 724 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 KLRF2D3W0D1 207 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 GCOM1H8Y6P7 765 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-240ENST00000556339 CTAGE5O15320 804 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 DAPK3O43293 454 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 MAFO75444 373 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-240ENST00000556339 EIF3JO75822 258 aaKnown RBP4.45□□□□□ -1.7
ATXN3-240ENST00000556339 IPO13O94829 963 aaKnown RBP4.45□□□□□ -1.7
ATXN3-240ENST00000556339 NUDT3O95989 172 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 TPM3P06753 285 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 PFKMP08237 780 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 POLR2MP0CAP2 368 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 MYOGP15173 224 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 LMO1P25800 156 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 RFC2P35250 354 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 NT5C2P49902 561 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 SLC25A3Q00325 362 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 SLC6A3Q01959 620 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 AAK1Q2M2I8 961 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 QRICH1Q2TAL8 776 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 ZSCAN23Q3MJ62 389 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 CATSPEREQ5SY80 951 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 NFRKBQ6P4R8 1299 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 KCNV1Q6PIU1 500 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 CATIPQ7Z7H3 387 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 GAS2L3Q86XJ1 694 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 HOMER1Q86YM7 354 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 TBC1D10CQ8IV04 446 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 HOMEZQ8IX15 550 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 ZNF276Q8N554 614 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 OR5AN1Q8NGI8 311 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 MORC4Q8TE76 937 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 ARNTL2Q8WYA1 636 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 CUL5Q93034 780 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 ZSCAN31Q96LW9 406 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-240ENST00000556339 FAM193BQ96PV7 902 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-240ENST00000556339 FOXB1Q99853 325 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 TM6SF1Q9BZW5 370 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 PCIF1Q9H4Z3 704 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 MLXIPQ9HAP2 919 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 GPRC5BQ9NZH0 403 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-240ENST00000556339 PCDHA1Q9Y5I3 950 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 A0A0G2JMZ2 1700 aa4.45□□□□□ -1.7
ATXN3-240ENST00000556339 BRWD1Q9NSI6 2320 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms