RNA–Protein interactions for RNA: ENST00000556249.1

SDR39U1-217, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-217ENST00000556249 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.97■□□□□ 0.31
SDR39U1-217ENST00000556249 GON4LQ3T8J9 2241 aa16.97■□□□□ 0.31
SDR39U1-217ENST00000556249 DSPP15924 2871 aaKnown RBP16.97■□□□□ 0.31
SDR39U1-217ENST00000556249 MYH11P35749 1972 aa16.97■□□□□ 0.31
SDR39U1-217ENST00000556249 LAMA5O15230 3695 aa16.97■□□□□ 0.31
SDR39U1-217ENST00000556249 PTPRDP23468 1912 aa16.96■□□□□ 0.31
SDR39U1-217ENST00000556249 ADAMTS9Q9P2N4 1935 aa16.96■□□□□ 0.31
SDR39U1-217ENST00000556249 TRAV19A0A0A6YYK7 116 aa16.96■□□□□ 0.31
SDR39U1-217ENST00000556249 C2orf78A6NCI8 922 aa16.96■□□□□ 0.31
SDR39U1-217ENST00000556249 BECN2A8MW95 431 aa16.96■□□□□ 0.31
SDR39U1-217ENST00000556249 TULP1O00294 542 aaPredicted RBP16.96■□□□□ 0.31
SDR39U1-217ENST00000556249 SCAMP3O14828 347 aaKnown RBP16.96■□□□□ 0.31
SDR39U1-217ENST00000556249 IKBKBO14920 756 aa16.96■□□□□ 0.31
SDR39U1-217ENST00000556249 CFIP05156 583 aa16.96■□□□□ 0.31
SDR39U1-217ENST00000556249 CSH1P0DML2 217 aa16.96■□□□□ 0.31
SDR39U1-217ENST00000556249 CSH2P0DML3 217 aa16.96■□□□□ 0.31
SDR39U1-217ENST00000556249 ITPKAP23677 461 aa16.96■□□□□ 0.31
SDR39U1-217ENST00000556249 ACAT1P24752 427 aaKnown RBP16.96■□□□□ 0.31
SDR39U1-217ENST00000556249 TAF6P49848 677 aa16.96■□□□□ 0.31
SDR39U1-217ENST00000556249 MYL5Q02045 173 aa16.96■□□□□ 0.31
SDR39U1-217ENST00000556249 LRRC63Q05C16 580 aa16.96■□□□□ 0.31
SDR39U1-217ENST00000556249 MESP2Q0VG99 397 aa16.96■□□□□ 0.31
SDR39U1-217ENST00000556249 USP4Q13107 963 aa16.96■□□□□ 0.31
SDR39U1-217ENST00000556249 COL28A1Q2UY09 1125 aa16.96■□□□□ 0.31
SDR39U1-217ENST00000556249 EMC10Q5UCC4 262 aa16.96■□□□□ 0.31
SDR39U1-217ENST00000556249 SLC39A4Q6P5W5 647 aa16.96■□□□□ 0.31
SDR39U1-217ENST00000556249 SYT12Q8IV01 421 aa16.96■□□□□ 0.31
SDR39U1-217ENST00000556249 NELFCDQ8IXH7 590 aa16.96■□□□□ 0.31
SDR39U1-217ENST00000556249 DCP1BQ8IZD4 617 aaKnown RBP16.96■□□□□ 0.31
SDR39U1-217ENST00000556249 ALLCQ8N6M5 410 aa16.96■□□□□ 0.31
SDR39U1-217ENST00000556249 OLIG1Q8TAK6 271 aa16.96■□□□□ 0.31
SDR39U1-217ENST00000556249 GPSM3Q9Y4H4 160 aa16.96■□□□□ 0.31
SDR39U1-217ENST00000556249 NBEAQ8NFP9 2946 aa16.95■□□□□ 0.3
SDR39U1-217ENST00000556249 A0A0B4J269 797 aa16.95■□□□□ 0.3
SDR39U1-217ENST00000556249 TISP43B9A030 160 aa16.95■□□□□ 0.3
SDR39U1-217ENST00000556249 SGK1O00141 431 aa16.95■□□□□ 0.3
SDR39U1-217ENST00000556249 TNFRSF10BO14763 440 aa16.95■□□□□ 0.3
SDR39U1-217ENST00000556249 USP17L7P0C7H9 530 aa16.95■□□□□ 0.3
SDR39U1-217ENST00000556249 TIE1P35590 1138 aa16.95■□□□□ 0.3
SDR39U1-217ENST00000556249 P2RY2P41231 377 aa16.95■□□□□ 0.3
SDR39U1-217ENST00000556249 SLC6A11P48066 632 aa16.95■□□□□ 0.3
SDR39U1-217ENST00000556249 ZXDBP98169 803 aa16.95■□□□□ 0.3
SDR39U1-217ENST00000556249 SCAPQ12770 1279 aa16.95■□□□□ 0.3
SDR39U1-217ENST00000556249 SMARCB1Q12824 385 aa16.95■□□□□ 0.3
SDR39U1-217ENST00000556249 NR1H3Q13133 447 aa16.95■□□□□ 0.3
SDR39U1-217ENST00000556249 IQCB1Q15051 598 aa16.95■□□□□ 0.3
SDR39U1-217ENST00000556249 GAB4Q2WGN9 574 aa16.95■□□□□ 0.3
SDR39U1-217ENST00000556249 PDZD3Q86UT5 571 aa16.95■□□□□ 0.3
SDR39U1-217ENST00000556249 SYCP3Q8IZU3 236 aa16.95■□□□□ 0.3
SDR39U1-217ENST00000556249 AOPEPQ8N6M6 819 aa16.95■□□□□ 0.3
SDR39U1-217ENST00000556249 TXNDC5Q8NBS9 432 aaKnown RBP16.95■□□□□ 0.3
SDR39U1-217ENST00000556249 GOLGA5Q8TBA6 731 aa16.95■□□□□ 0.3
SDR39U1-217ENST00000556249 KCTD10Q9H3F6 313 aa16.95■□□□□ 0.3
SDR39U1-217ENST00000556249 DPP3Q9NY33 737 aa16.95■□□□□ 0.3
SDR39U1-217ENST00000556249 GCNT4Q9P109 453 aa16.95■□□□□ 0.3
SDR39U1-217ENST00000556249 CGNQ9P2M7 1197 aaKnown RBP16.95■□□□□ 0.3
SDR39U1-217ENST00000556249 GOLGA6L19H0YKK7 550 aa16.94■□□□□ 0.3
SDR39U1-217ENST00000556249 PDXKO00764 312 aa16.94■□□□□ 0.3
SDR39U1-217ENST00000556249 HCRTO43612 131 aa16.94■□□□□ 0.3
SDR39U1-217ENST00000556249 CALUO43852 315 aaPredicted RBP16.94■□□□□ 0.3
SDR39U1-217ENST00000556249 NOL4O94818 638 aa16.94■□□□□ 0.3
SDR39U1-217ENST00000556249 KLF8O95600 359 aaPredicted RBP16.94■□□□□ 0.3
SDR39U1-217ENST00000556249 ATXN3P54252 364 aaPredicted RBP16.94■□□□□ 0.3
SDR39U1-217ENST00000556249 STX17P56962 302 aa16.94■□□□□ 0.3
SDR39U1-217ENST00000556249 SNRPFP62306 86 aaKnown RBP16.94■□□□□ 0.3
SDR39U1-217ENST00000556249 TPM4P67936 248 aa16.94■□□□□ 0.3
SDR39U1-217ENST00000556249 KYAT1Q16773 422 aa16.94■□□□□ 0.3
SDR39U1-217ENST00000556249 TPD52L1Q16890 204 aaPredicted RBP16.94■□□□□ 0.3
SDR39U1-217ENST00000556249 SCARA3Q6AZY7 606 aa16.94■□□□□ 0.3
SDR39U1-217ENST00000556249 TTI2Q6NXR4 508 aa16.94■□□□□ 0.3
SDR39U1-217ENST00000556249 SLC23A3Q6PIS1 610 aa16.94■□□□□ 0.3
SDR39U1-217ENST00000556249 HS2ST1Q7LGA3 356 aa16.94■□□□□ 0.3
SDR39U1-217ENST00000556249 CD302Q8IX05 232 aa16.94■□□□□ 0.3
SDR39U1-217ENST00000556249 PGBD3Q8N328 593 aa16.94■□□□□ 0.3
SDR39U1-217ENST00000556249 HDDC3Q8N4P3 179 aa16.94■□□□□ 0.3
SDR39U1-217ENST00000556249 HMGB4Q8WW32 186 aa16.94■□□□□ 0.3
SDR39U1-217ENST00000556249 CAMK1GQ96NX5 476 aa16.94■□□□□ 0.3
SDR39U1-217ENST00000556249 TSPAN18Q96SJ8 248 aa16.94■□□□□ 0.3
SDR39U1-217ENST00000556249 RBSNQ9H1K0 784 aa16.94■□□□□ 0.3
SDR39U1-217ENST00000556249 BCCIPQ9P287 314 aaKnown RBP eCLIP16.94■□□□□ 0.3
SDR39U1-217ENST00000556249 PILRBQ9UKJ0 227 aa16.94■□□□□ 0.3
SDR39U1-217ENST00000556249 TRAF3IP3Q9Y228 551 aa16.94■□□□□ 0.3
SDR39U1-217ENST00000556249 TNRC6BQ9UPQ9 1833 aaKnown RBP16.93■□□□□ 0.3
SDR39U1-217ENST00000556249 FREM2Q5SZK8 3169 aa16.93■□□□□ 0.3
SDR39U1-217ENST00000556249 KPNA7A9QM74 516 aa16.93■□□□□ 0.3
SDR39U1-217ENST00000556249 ANKRD63C9JTQ0 380 aa16.93■□□□□ 0.3
SDR39U1-217ENST00000556249 ALDH1A2O94788 518 aa16.93■□□□□ 0.3
SDR39U1-217ENST00000556249 FGFR1OPO95684 399 aaKnown RBP16.93■□□□□ 0.3
SDR39U1-217ENST00000556249 HDCP19113 662 aa16.93■□□□□ 0.3
SDR39U1-217ENST00000556249 PAX3P23760 479 aa16.93■□□□□ 0.3
SDR39U1-217ENST00000556249 HOXD13P35453 343 aa16.93■□□□□ 0.3
SDR39U1-217ENST00000556249 TSPY1Q01534 308 aa16.93■□□□□ 0.3
SDR39U1-217ENST00000556249 KCNA1Q09470 495 aa16.93■□□□□ 0.3
SDR39U1-217ENST00000556249 GSE1Q14687 1217 aa16.93■□□□□ 0.3
SDR39U1-217ENST00000556249 EDRF1Q3B7T1 1238 aa16.93■□□□□ 0.3
SDR39U1-217ENST00000556249 MAP7D1Q3KQU3 841 aa16.93■□□□□ 0.3
SDR39U1-217ENST00000556249 ZCWPW2Q504Y3 356 aa16.93■□□□□ 0.3
SDR39U1-217ENST00000556249 LYSMD4Q5XG99 296 aa16.93■□□□□ 0.3
SDR39U1-217ENST00000556249 ANKRD40Q6AI12 368 aa16.93■□□□□ 0.3
SDR39U1-217ENST00000556249 LUZP1Q86V48 1076 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms