RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 PCDHA4Q9UN74 947 aa7.49□□□□□ -1.21
ATXN3-236ENST00000556220 INVSQ9Y283 1065 aa7.49□□□□□ -1.21
ATXN3-236ENST00000556220 YIPF1Q9Y548 306 aa7.49□□□□□ -1.21
ATXN3-236ENST00000556220 ZNF462Q96JM2 2506 aa7.49□□□□□ -1.21
ATXN3-236ENST00000556220 KALRNO60229 2985 aa7.49□□□□□ -1.21
ATXN3-236ENST00000556220 FAM95CA0A1B0GW59 222 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 OTOL1A6NHN0 477 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-236ENST00000556220 LRRIQ4A6NIV6 560 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 ACKR2O00590 384 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 PODXLO00592 558 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 LYPLA2O95372 231 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 PRAMEF12O95522 483 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 ENGP17813 658 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 MAPK8P45983 427 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 DHPSP49366 369 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-236ENST00000556220 MCM2P49736 904 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 CYP4A11Q02928 519 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 SOX4Q06945 474 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-236ENST00000556220 PLD1Q13393 1074 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 PRPF4BQ13523 1007 aaKnown RBP7.48□□□□□ -1.21
ATXN3-236ENST00000556220 RUNX3Q13761 415 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 HNRNPDQ14103 355 aaKnown RBP7.48□□□□□ -1.21
ATXN3-236ENST00000556220 NTRK3Q16288 839 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 ARHGAP15Q53QZ3 475 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 XKR4Q5GH76 650 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 GPR158Q5T848 1215 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 ERICH6BQ5W0A0 696 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 NCAPH2Q6IBW4 605 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 PPP4R3AQ6IN85 833 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 ZNF280DQ6N043 979 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 PAOXQ6QHF9 649 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 ALKAL1Q6UXT8 129 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 DNAJB7Q7Z6W7 309 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-236ENST00000556220 CCNJLQ8IV13 435 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 ZBTB8OSQ8IWT0 167 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 GALNT12Q8IXK2 581 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 HDDC3Q8N4P3 179 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 APPL2Q8NEU8 664 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 BEST2Q8NFU1 509 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 RPLP0P6Q8NHW5 317 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 HAS1Q92839 578 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 HSD17B14Q9BPX1 270 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 RNF26Q9BY78 433 aaPredicted RBP7.48□□□□□ -1.21
ATXN3-236ENST00000556220 TASP1Q9H6P5 420 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 HPS4Q9NQG7 708 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 EGFL7Q9UHF1 273 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 ASB3Q9Y575 518 aa7.48□□□□□ -1.21
ATXN3-236ENST00000556220 GOLGA4Q13439 2230 aaKnown RBP7.48□□□□□ -1.21
ATXN3-236ENST00000556220 A0A096LPE4 126 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 A0A1W2PPZ6 126 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 MARCH6O60337 910 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 VNN2O95498 520 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 FGF19O95750 216 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 F13BP05160 661 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 NEFLP07196 543 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 IFNAR1P17181 557 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 BCKDHBP21953 392 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 RPL9P32969 192 aaKnown RBP7.47□□□□□ -1.21
ATXN3-236ENST00000556220 PI4KAP42356 2102 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 ALDH1A3P47895 512 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 RARRES1P49788 294 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 DUSP4Q13115 394 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 MAPK6Q16659 721 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 INF2Q27J81 1249 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 DCAF4L1Q3SXM0 396 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 HP1BP3Q5SSJ5 553 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-236ENST00000556220 EEF1DP3Q658K8 133 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 SLC23A3Q6PIS1 610 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 MAEAQ7L5Y9 396 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 SYT12Q8IV01 421 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 BLIDQ8IZY5 108 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 DAGLBQ8NCG7 672 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 TSTD1Q8NFU3 115 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 ADAMTS14Q8WXS8 1223 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 PSMG2Q969U7 264 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 EXOC4Q96A65 974 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 P2RY13Q9BPV8 354 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 EIF2AK1Q9BQI3 630 aaKnown RBP7.47□□□□□ -1.21
ATXN3-236ENST00000556220 YIPF2Q9BWQ6 316 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 SLC26A6Q9BXS9 759 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 OSBPL1AQ9BXW6 950 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 NRSN2Q9GZP1 204 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 C2orf40Q9H1Z8 148 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 CLEC4MQ9H2X3 399 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-236ENST00000556220 EBF3Q9H4W6 596 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 ZFYVE1Q9HBF4 777 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 GPRC5CQ9NQ84 441 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 ANO2Q9NQ90 1003 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 TMEM74BQ9NUR3 256 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 SLC38A7Q9NVC3 462 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 MBD1Q9UIS9 605 aaPredicted RBP7.47□□□□□ -1.21
ATXN3-236ENST00000556220 NUB1Q9Y5A7 615 aa7.47□□□□□ -1.21
ATXN3-236ENST00000556220 HECTD1Q9ULT8 2610 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 A0A1W2PP55 124 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 METTL12A8MUP2 240 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 ICMTO60725 284 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 OPHN1O60890 802 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 C1QL1O75973 258 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 OAZ2O95190 189 aa7.46□□□□□ -1.22
ATXN3-236ENST00000556220 PRB1P04280 392 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms