RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 NUDT18Q6ZVK8 323 aa16.44■□□□□ 0.22
SUPT16H-205ENST00000556217 TRAPPC11Q7Z392 1133 aa16.44■□□□□ 0.22
SUPT16H-205ENST00000556217 SYT12Q8IV01 421 aa16.44■□□□□ 0.22
SUPT16H-205ENST00000556217 PGBD3Q8N328 593 aa16.44■□□□□ 0.22
SUPT16H-205ENST00000556217 PDZD8Q8NEN9 1154 aa16.44■□□□□ 0.22
SUPT16H-205ENST00000556217 OR6B3Q8NGW1 331 aa16.44■□□□□ 0.22
SUPT16H-205ENST00000556217 OTUB2Q96DC9 234 aa16.44■□□□□ 0.22
SUPT16H-205ENST00000556217 FNBP1Q96RU3 617 aa16.44■□□□□ 0.22
SUPT16H-205ENST00000556217 MRPL45Q9BRJ2 306 aaKnown RBP16.44■□□□□ 0.22
SUPT16H-205ENST00000556217 ITPR1Q14643 2758 aa16.44■□□□□ 0.22
SUPT16H-205ENST00000556217 CEP192Q8TEP8 1941 aa16.44■□□□□ 0.22
SUPT16H-205ENST00000556217 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.43■□□□□ 0.22
SUPT16H-205ENST00000556217 E2F8A0AVK6 867 aa16.43■□□□□ 0.22
SUPT16H-205ENST00000556217 RTN3O95197 1032 aaPredicted RBP16.43■□□□□ 0.22
SUPT16H-205ENST00000556217 DLATP10515 647 aaKnown RBP16.43■□□□□ 0.22
SUPT16H-205ENST00000556217 PTPN1P18031 435 aaKnown RBP16.43■□□□□ 0.22
SUPT16H-205ENST00000556217 YWHAQP27348 245 aa16.43■□□□□ 0.22
SUPT16H-205ENST00000556217 KDSRQ06136 332 aa16.43■□□□□ 0.22
SUPT16H-205ENST00000556217 IFRD2Q12894 506 aaPredicted RBP16.43■□□□□ 0.22
SUPT16H-205ENST00000556217 SNRNP35Q16560 246 aaKnown RBP16.43■□□□□ 0.22
SUPT16H-205ENST00000556217 LYSMD4Q5XG99 296 aa16.43■□□□□ 0.22
SUPT16H-205ENST00000556217 BTBD8Q5XKL5 378 aa16.43■□□□□ 0.22
SUPT16H-205ENST00000556217 ARMCX6Q7L4S7 300 aa16.43■□□□□ 0.22
SUPT16H-205ENST00000556217 TRMT11Q7Z4G4 463 aaKnown RBP16.43■□□□□ 0.22
SUPT16H-205ENST00000556217 TMEFF1Q8IYR6 380 aa16.43■□□□□ 0.22
SUPT16H-205ENST00000556217 DEFB124Q8NES8 71 aa16.43■□□□□ 0.22
SUPT16H-205ENST00000556217 KCNV2Q8TDN2 545 aa16.43■□□□□ 0.22
SUPT16H-205ENST00000556217 HMGB4Q8WW32 186 aa16.43■□□□□ 0.22
SUPT16H-205ENST00000556217 RLN3Q8WXF3 142 aa16.43■□□□□ 0.22
SUPT16H-205ENST00000556217 OVCA2Q8WZ82 227 aa16.43■□□□□ 0.22
SUPT16H-205ENST00000556217 NEUROG3Q9Y4Z2 214 aa16.43■□□□□ 0.22
SUPT16H-205ENST00000556217 MORC2Q9Y6X9 1032 aaPredicted RBP16.43■□□□□ 0.22
SUPT16H-205ENST00000556217 PCNX2A6NKB5 2137 aa16.43■□□□□ 0.22
SUPT16H-205ENST00000556217 ATP8B3O60423 1300 aa16.43■□□□□ 0.22
SUPT16H-205ENST00000556217 WDFY3Q8IZQ1 3526 aa16.42■□□□□ 0.22
SUPT16H-205ENST00000556217 TCRBV21S2A2A0A5A6 115 aa16.42■□□□□ 0.22
SUPT16H-205ENST00000556217 ANTXRLA6NF34 631 aa16.42■□□□□ 0.22
SUPT16H-205ENST00000556217 SCAMP3O14828 347 aaKnown RBP16.42■□□□□ 0.22
SUPT16H-205ENST00000556217 EIF3DO15371 548 aaKnown RBP eCLIP16.42■□□□□ 0.22
SUPT16H-205ENST00000556217 HNRNPLP14866 589 aaKnown RBP eCLIP16.42■□□□□ 0.22
SUPT16H-205ENST00000556217 HOXD12P35452 270 aa16.42■□□□□ 0.22
SUPT16H-205ENST00000556217 KIR2DL1P43626 348 aaPredicted RBP16.42■□□□□ 0.22
SUPT16H-205ENST00000556217 MAPK8P45983 427 aa16.42■□□□□ 0.22
SUPT16H-205ENST00000556217 GAD2Q05329 585 aa16.42■□□□□ 0.22
SUPT16H-205ENST00000556217 WDR72Q3MJ13 1102 aa16.42■□□□□ 0.22
SUPT16H-205ENST00000556217 C12orf40Q86WS4 652 aa16.42■□□□□ 0.22
SUPT16H-205ENST00000556217 SFTPA1Q8IWL2 248 aa16.42■□□□□ 0.22
SUPT16H-205ENST00000556217 NUP93Q8N1F7 819 aa16.42■□□□□ 0.22
SUPT16H-205ENST00000556217 PDILTQ8N807 584 aa16.42■□□□□ 0.22
SUPT16H-205ENST00000556217 FBXO32Q969P5 355 aa16.42■□□□□ 0.22
SUPT16H-205ENST00000556217 TNMDQ9H2S6 317 aa16.42■□□□□ 0.22
SUPT16H-205ENST00000556217 A0A087X0B3 334 aa16.41■□□□□ 0.22
SUPT16H-205ENST00000556217 TBC1D3BA6NDS4 549 aa16.41■□□□□ 0.22
SUPT16H-205ENST00000556217 A8MXQ7 604 aa16.41■□□□□ 0.22
SUPT16H-205ENST00000556217 AP5Z1O43299 807 aa16.41■□□□□ 0.22
SUPT16H-205ENST00000556217 CST3P01034 146 aaPredicted RBP16.41■□□□□ 0.22
SUPT16H-205ENST00000556217 ENGP17813 658 aa16.41■□□□□ 0.22
SUPT16H-205ENST00000556217 PTGER3P43115 390 aa16.41■□□□□ 0.22
SUPT16H-205ENST00000556217 ATXN3P54252 364 aaPredicted RBP16.41■□□□□ 0.22
SUPT16H-205ENST00000556217 AMPD3Q01432 767 aa16.41■□□□□ 0.22
SUPT16H-205ENST00000556217 TRPC3Q13507 836 aa16.41■□□□□ 0.22
SUPT16H-205ENST00000556217 SLC39A14Q15043 492 aa16.41■□□□□ 0.22
SUPT16H-205ENST00000556217 MAP7D1Q3KQU3 841 aa16.41■□□□□ 0.22
SUPT16H-205ENST00000556217 LY6G5CQ5SRR4 150 aa16.41■□□□□ 0.22
SUPT16H-205ENST00000556217 HECTD3Q5T447 861 aa16.41■□□□□ 0.22
SUPT16H-205ENST00000556217 EMC10Q5UCC4 262 aa16.41■□□□□ 0.22
SUPT16H-205ENST00000556217 SLC23A3Q6PIS1 610 aa16.41■□□□□ 0.22
SUPT16H-205ENST00000556217 RABEPKQ7Z6M1 372 aa16.41■□□□□ 0.22
SUPT16H-205ENST00000556217 RDH13Q8NBN7 331 aa16.41■□□□□ 0.22
SUPT16H-205ENST00000556217 B3GALNT2Q8NCR0 500 aa16.41■□□□□ 0.22
SUPT16H-205ENST00000556217 CEP76Q8TAP6 659 aa16.41■□□□□ 0.22
SUPT16H-205ENST00000556217 CGRRF1Q99675 332 aa16.41■□□□□ 0.22
SUPT16H-205ENST00000556217 ZNF518BQ9C0D4 1074 aa16.41■□□□□ 0.22
SUPT16H-205ENST00000556217 MBD1Q9UIS9 605 aaPredicted RBP16.41■□□□□ 0.22
SUPT16H-205ENST00000556217 SH3BP1Q9Y3L3 701 aa16.41■□□□□ 0.22
SUPT16H-205ENST00000556217 ZBTB24O43167 697 aaPredicted RBP16.4■□□□□ 0.22
SUPT16H-205ENST00000556217 COCHO43405 550 aa16.4■□□□□ 0.22
SUPT16H-205ENST00000556217 ADAM23O75077 832 aa16.4■□□□□ 0.22
SUPT16H-205ENST00000556217 STAU1O95793 577 aaKnown RBP16.4■□□□□ 0.22
SUPT16H-205ENST00000556217 CFIP05156 583 aa16.4■□□□□ 0.22
SUPT16H-205ENST00000556217 CHRM1P11229 460 aaPredicted RBP16.4■□□□□ 0.22
SUPT16H-205ENST00000556217 RDXP35241 583 aaKnown RBP16.4■□□□□ 0.22
SUPT16H-205ENST00000556217 TUBP50607 506 aa16.4■□□□□ 0.22
SUPT16H-205ENST00000556217 CACNA2D1P54289 1103 aa16.4■□□□□ 0.22
SUPT16H-205ENST00000556217 SNRPFP62306 86 aaKnown RBP16.4■□□□□ 0.22
SUPT16H-205ENST00000556217 MESP2Q0VG99 397 aa16.4■□□□□ 0.22
SUPT16H-205ENST00000556217 CUL4AQ13619 759 aa16.4■□□□□ 0.22
SUPT16H-205ENST00000556217 PSMD6Q15008 389 aa16.4■□□□□ 0.22
SUPT16H-205ENST00000556217 FAM173BQ6P4H8 233 aa16.4■□□□□ 0.22
SUPT16H-205ENST00000556217 SLC36A4Q6YBV0 504 aa16.4■□□□□ 0.22
SUPT16H-205ENST00000556217 HDDC3Q8N4P3 179 aa16.4■□□□□ 0.22
SUPT16H-205ENST00000556217 ZNF513Q8N8E2 541 aaPredicted RBP16.4■□□□□ 0.22
SUPT16H-205ENST00000556217 GLIS3Q8NEA6 775 aa16.4■□□□□ 0.22
SUPT16H-205ENST00000556217 HPS3Q969F9 1004 aa16.4■□□□□ 0.22
SUPT16H-205ENST00000556217 SYAP1Q96A49 352 aaPredicted RBP16.4■□□□□ 0.22
SUPT16H-205ENST00000556217 CCDC127Q96BQ5 260 aa16.4■□□□□ 0.22
SUPT16H-205ENST00000556217 B3GNT5Q9BYG0 378 aa16.4■□□□□ 0.22
SUPT16H-205ENST00000556217 CUEDC2Q9H467 287 aa16.4■□□□□ 0.22
SUPT16H-205ENST00000556217 DPEP3Q9H4B8 488 aa16.4■□□□□ 0.22
SUPT16H-205ENST00000556217 AGPAT3Q9NRZ7 376 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms