RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 SYCP2LQ5T4T6 812 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 ANKS6Q68DC2 871 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 MARCH10Q8NA82 808 aaPredicted RBP11.09□□□□□ -0.63
ACTN1-216ENST00000556083 DIS3LQ8TF46 1054 aaKnown RBP11.09□□□□□ -0.63
ACTN1-216ENST00000556083 MTMR12Q9C0I1 747 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 CYP4F11Q9HBI6 524 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 ADAM30Q9UKF2 790 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 ATP11BQ9Y2G3 1177 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 M0QYT0 321 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 TK2O00142 265 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 SLC9A3R1O14745 358 aaPredicted RBP11.09□□□□□ -0.63
ACTN1-216ENST00000556083 RAD23AP54725 363 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 PABPC1LQ4VXU2 614 aaKnown RBP11.09□□□□□ -0.63
ACTN1-216ENST00000556083 SLC26A11Q86WA9 606 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 LINC00116Q8NCU8 138 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 MAML3Q96JK9 1138 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 UROC1Q96N76 676 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 SERPINB11Q96P15 392 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 EPB41L4AQ9HCS5 686 aaPredicted RBP11.09□□□□□ -0.63
ACTN1-216ENST00000556083 SATB2Q9UPW6 733 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 ANKRD6Q9Y2G4 727 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 ADGRA3Q8IWK6 1321 aa11.09□□□□□ -0.63
ACTN1-216ENST00000556083 FAM170AA1A519 330 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 PJA2O43164 708 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 FKBP6O75344 327 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 NPM3O75607 178 aaKnown RBP11.08□□□□□ -0.64
ACTN1-216ENST00000556083 ITGB3P05106 788 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 TPBGLP0DKB5 382 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 STARD3Q14849 445 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 KIZQ2M2Z5 673 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 STK40Q8N2I9 435 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 ABTB1Q969K4 478 aaPredicted RBP11.08□□□□□ -0.64
ACTN1-216ENST00000556083 AGAP3Q96P47 875 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 ABHD16BQ9H3Z7 469 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 PCDH9Q9HC56 1237 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 METTL5Q9NRN9 209 aaKnown RBP11.08□□□□□ -0.64
ACTN1-216ENST00000556083 MYPNQ86TC9 1320 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 LOC102724159A0A0B4J2E5 919 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 ESYT3A0FGR9 886 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 PDGFRBP09619 1106 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 PPP2R1BP30154 601 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 CHRNA5P30532 468 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 PWP2Q15269 919 aaKnown RBP11.08□□□□□ -0.64
ACTN1-216ENST00000556083 KDM7AQ6ZMT4 941 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 MAGEC3Q8TD91 643 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 QRFPRQ96P65 431 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 OLFM1Q99784 485 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 PCMTD2Q9NV79 361 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 TMEM120BA0PK00 339 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 CCT8L1PA6NM43 557 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 PPP1R3GB7ZBB8 358 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 KCNQ2O43526 872 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 XYLBO75191 536 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 SLC9A1P19634 815 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 FXR1P51114 621 aaKnown RBP eCLIP11.08□□□□□ -0.64
ACTN1-216ENST00000556083 POLR2LP62875 67 aaKnown RBP11.08□□□□□ -0.64
ACTN1-216ENST00000556083 CHRNB3Q05901 458 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 CCDC153Q494R4 210 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 ANKMY2Q8IV38 441 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 ARMC2Q8NEN0 867 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 MAGEB18Q96M61 343 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 ELOVL4Q9GZR5 314 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 FAM124BQ9H5Z6 455 aaPredicted RBP11.08□□□□□ -0.64
ACTN1-216ENST00000556083 PARVBQ9HBI1 364 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 NEK6Q9HC98 313 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 GBA2Q9HCG7 927 aaPredicted RBP11.08□□□□□ -0.64
ACTN1-216ENST00000556083 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.08□□□□□ -0.64
ACTN1-216ENST00000556083 SLC39A10Q9ULF5 831 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 ACOT9Q9Y305 439 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 PCDHB5Q9Y5E4 795 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 B3GAT3O94766 335 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 CYP1A1P04798 512 aaPredicted RBP11.08□□□□□ -0.64
ACTN1-216ENST00000556083 CCR1P32246 355 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 ERAP2Q6P179 960 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 ADGRF2Q8IZF7 708 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 ENGASEQ8NFI3 743 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 PANX3Q96QZ0 392 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 ZDHHC9Q9Y397 364 aa11.08□□□□□ -0.64
ACTN1-216ENST00000556083 A0A087WWV3 80 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 LZTS3O60299 673 aaPredicted RBP11.07□□□□□ -0.64
ACTN1-216ENST00000556083 GYPCP04921 128 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 ALDH2P05091 517 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 CTSHP09668 335 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 CYP11B1P15538 503 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 CRABP2P29373 138 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 PPP3CCP48454 512 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 CARSP49589 748 aaKnown RBP11.07□□□□□ -0.64
ACTN1-216ENST00000556083 ALDH18A1P54886 795 aaKnown RBP11.07□□□□□ -0.64
ACTN1-216ENST00000556083 MGAT5Q09328 741 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 REM2Q8IYK8 340 aaPredicted RBP11.07□□□□□ -0.64
ACTN1-216ENST00000556083 SLC30A5Q8TAD4 765 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 TMEM176AQ96HP8 235 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 TAAR1Q96RJ0 339 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 CHST12Q9NRB3 414 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 IMPAD1Q9NX62 359 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 SYBUQ9NX95 663 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 BARX2Q9UMQ3 279 aaPredicted RBP11.07□□□□□ -0.64
ACTN1-216ENST00000556083 RPS6KL1Q9Y6S9 549 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 MROH7Q68CQ1 1323 aa11.07□□□□□ -0.64
ACTN1-216ENST00000556083 CYB561D2O14569 222 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms