RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 SNX30Q5VWJ9 437 aa15.28■□□□□ 0.04
CHMP4BP1-201ENST00000556017 TXNDC5Q8NBS9 432 aaKnown RBP15.28■□□□□ 0.04
CHMP4BP1-201ENST00000556017 B3GALNT2Q8NCR0 500 aa15.28■□□□□ 0.04
CHMP4BP1-201ENST00000556017 SCAMP5Q8TAC9 235 aa15.28■□□□□ 0.04
CHMP4BP1-201ENST00000556017 C7orf25Q9BPX7 421 aa15.28■□□□□ 0.04
CHMP4BP1-201ENST00000556017 KIAA1586Q9HCI6 787 aa15.28■□□□□ 0.04
CHMP4BP1-201ENST00000556017 DSPP15924 2871 aaKnown RBP15.28■□□□□ 0.04
CHMP4BP1-201ENST00000556017 C1QTNF9BB2RNN3 333 aa15.27■□□□□ 0.04
CHMP4BP1-201ENST00000556017 PROS1P07225 676 aa15.27■□□□□ 0.04
CHMP4BP1-201ENST00000556017 ZDHHC11BP0C7U3 371 aa15.27■□□□□ 0.04
CHMP4BP1-201ENST00000556017 C1QTNF9P0C862 333 aa15.27■□□□□ 0.04
CHMP4BP1-201ENST00000556017 TIE1P35590 1138 aa15.27■□□□□ 0.04
CHMP4BP1-201ENST00000556017 CASP4P49662 377 aa15.27■□□□□ 0.04
CHMP4BP1-201ENST00000556017 NOVA1P51513 510 aaKnown RBP15.27■□□□□ 0.04
CHMP4BP1-201ENST00000556017 CYP2J2P51589 502 aa15.27■□□□□ 0.04
CHMP4BP1-201ENST00000556017 BMT2Q1RMZ1 405 aa15.27■□□□□ 0.04
CHMP4BP1-201ENST00000556017 LY6G5CQ5SRR4 150 aa15.27■□□□□ 0.04
CHMP4BP1-201ENST00000556017 SH3PXD2AQ5TCZ1 1133 aa15.27■□□□□ 0.04
CHMP4BP1-201ENST00000556017 HS2ST1Q7LGA3 356 aa15.27■□□□□ 0.04
CHMP4BP1-201ENST00000556017 ZMIZ2Q8NF64 920 aa15.27■□□□□ 0.04
CHMP4BP1-201ENST00000556017 OR6B3Q8NGW1 331 aa15.27■□□□□ 0.04
CHMP4BP1-201ENST00000556017 CCDC127Q96BQ5 260 aa15.27■□□□□ 0.04
CHMP4BP1-201ENST00000556017 INTS4Q96HW7 963 aaKnown RBP15.27■□□□□ 0.04
CHMP4BP1-201ENST00000556017 PNKPQ96T60 521 aa15.27■□□□□ 0.04
CHMP4BP1-201ENST00000556017 ELOVL4Q9GZR5 314 aa15.27■□□□□ 0.04
CHMP4BP1-201ENST00000556017 SNX25Q9H3E2 840 aa15.27■□□□□ 0.04
CHMP4BP1-201ENST00000556017 SMYD3Q9H7B4 428 aa15.27■□□□□ 0.04
CHMP4BP1-201ENST00000556017 VRTNQ9H8Y1 702 aa15.27■□□□□ 0.04
CHMP4BP1-201ENST00000556017 TFIP11Q9UBB9 837 aaKnown RBP15.27■□□□□ 0.04
CHMP4BP1-201ENST00000556017 CHORDC1Q9UHD1 332 aaPredicted RBP15.27■□□□□ 0.04
CHMP4BP1-201ENST00000556017 EVLQ9UI08 416 aaPredicted RBP15.27■□□□□ 0.04
CHMP4BP1-201ENST00000556017 E2F8A0AVK6 867 aa15.26■□□□□ 0.03
CHMP4BP1-201ENST00000556017 TRIM24O15164 1050 aa15.26■□□□□ 0.03
CHMP4BP1-201ENST00000556017 SPTLC2O15270 562 aa15.26■□□□□ 0.03
CHMP4BP1-201ENST00000556017 BEST1O76090 585 aa15.26■□□□□ 0.03
CHMP4BP1-201ENST00000556017 VNN1O95497 513 aa15.26■□□□□ 0.03
CHMP4BP1-201ENST00000556017 KLF8O95600 359 aaPredicted RBP15.26■□□□□ 0.03
CHMP4BP1-201ENST00000556017 TNNI1P19237 187 aa15.26■□□□□ 0.03
CHMP4BP1-201ENST00000556017 SPINK2P20155 84 aa15.26■□□□□ 0.03
CHMP4BP1-201ENST00000556017 ANXA13P27216 316 aa15.26■□□□□ 0.03
CHMP4BP1-201ENST00000556017 ASIC1P78348 528 aa15.26■□□□□ 0.03
CHMP4BP1-201ENST00000556017 CLDN10P78369 228 aa15.26■□□□□ 0.03
CHMP4BP1-201ENST00000556017 KDSRQ06136 332 aa15.26■□□□□ 0.03
CHMP4BP1-201ENST00000556017 PEAR1Q5VY43 1037 aaPredicted RBP15.26■□□□□ 0.03
CHMP4BP1-201ENST00000556017 TDRD10Q5VZ19 366 aaKnown RBP15.26■□□□□ 0.03
CHMP4BP1-201ENST00000556017 MIB1Q86YT6 1006 aa15.26■□□□□ 0.03
CHMP4BP1-201ENST00000556017 NELFCDQ8IXH7 590 aa15.26■□□□□ 0.03
CHMP4BP1-201ENST00000556017 C12orf56Q8IXR9 622 aa15.26■□□□□ 0.03
CHMP4BP1-201ENST00000556017 NUP93Q8N1F7 819 aa15.26■□□□□ 0.03
CHMP4BP1-201ENST00000556017 XXYLT1Q8NBI6 393 aa15.26■□□□□ 0.03
CHMP4BP1-201ENST00000556017 P2RY11Q96G91 374 aa15.26■□□□□ 0.03
CHMP4BP1-201ENST00000556017 DUSP9Q99956 384 aaKnown RBP15.26■□□□□ 0.03
CHMP4BP1-201ENST00000556017 CUEDC2Q9H467 287 aa15.26■□□□□ 0.03
CHMP4BP1-201ENST00000556017 ZSCAN16Q9H4T2 348 aaPredicted RBP15.26■□□□□ 0.03
CHMP4BP1-201ENST00000556017 CCSER2Q9H7U1 834 aa15.26■□□□□ 0.03
CHMP4BP1-201ENST00000556017 UPF2Q9HAU5 1272 aaKnown RBP15.26■□□□□ 0.03
CHMP4BP1-201ENST00000556017 TMEM9BQ9NQ34 198 aa15.26■□□□□ 0.03
CHMP4BP1-201ENST00000556017 FREM2Q5SZK8 3169 aa15.26■□□□□ 0.03
CHMP4BP1-201ENST00000556017 CACNA1GO43497 2377 aa15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 A8MXQ7 604 aa15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 SLC9A3R1O14745 358 aaPredicted RBP15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 KHNYNO15037 678 aaKnown RBP15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 STX6O43752 255 aa15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 PPP6R2O75170 966 aa15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 ABL1P00519 1130 aa15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 MBL2P11226 248 aaPredicted RBP15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 ADH5P11766 374 aa15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 CSRP1P21291 193 aaKnown RBP15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 YWHAQP27348 245 aa15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 GRIA2P42262 883 aa15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 TNFRSF4P43489 277 aa15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 DHPSP49366 369 aaPredicted RBP15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 ZNF252P-AS1Q0IIN9 211 aa15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 IFRD2Q12894 506 aaPredicted RBP15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 UNC13DQ70J99 1090 aa15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 CYP2U1Q7Z449 544 aa15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 FAM35AQ86V20 835 aa15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 C11orf74Q86VG3 221 aa15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 BBS7Q8IWZ6 715 aa15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 TMEFF1Q8IYR6 380 aa15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 FUKQ8N0W3 1084 aa15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 CCDC26Q8TAB7 109 aa15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 DHX58Q96C10 678 aa15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 SLITRK1Q96PX8 696 aa15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 ARHGEF4Q9NR80 690 aa15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 FOXD4L1Q9NU39 408 aa15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 EHD2Q9NZN4 543 aa15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 NXF1Q9UBU9 619 aaKnown RBP15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 NBEAQ8NFP9 2946 aa15.25■□□□□ 0.03
CHMP4BP1-201ENST00000556017 UBE4BO95155 1302 aa15.24■□□□□ 0.03
CHMP4BP1-201ENST00000556017 LRRIQ3A6PVS8 624 aaPredicted RBP15.24■□□□□ 0.03
CHMP4BP1-201ENST00000556017 HOXC11O43248 304 aaPredicted RBP15.24■□□□□ 0.03
CHMP4BP1-201ENST00000556017 C4BPAP04003 597 aaKnown RBP15.24■□□□□ 0.03
CHMP4BP1-201ENST00000556017 APODP05090 189 aa15.24■□□□□ 0.03
CHMP4BP1-201ENST00000556017 CEACAM1P13688 526 aa15.24■□□□□ 0.03
CHMP4BP1-201ENST00000556017 ATICP31939 592 aa15.24■□□□□ 0.03
CHMP4BP1-201ENST00000556017 SLC5A3P53794 718 aa15.24■□□□□ 0.03
CHMP4BP1-201ENST00000556017 TNNC1P63316 161 aa15.24■□□□□ 0.03
CHMP4BP1-201ENST00000556017 STK38Q15208 465 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms