RNA–Protein interactions for RNA: ENST00000555943.1

SUPT16H-204, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2 BASIC

Gene SUPT16H, Length 915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-204ENST00000555943 SAMD11Q96NU1 681 aa8.2□□□□□ -1.1
SUPT16H-204ENST00000555943 FAM193BQ96PV7 902 aaPredicted RBP8.2□□□□□ -1.1
SUPT16H-204ENST00000555943 TGS1Q96RS0 853 aaKnown RBP8.2□□□□□ -1.1
SUPT16H-204ENST00000555943 TSPAN18Q96SJ8 248 aa8.2□□□□□ -1.1
SUPT16H-204ENST00000555943 GAD1Q99259 594 aa8.2□□□□□ -1.1
SUPT16H-204ENST00000555943 TUBGCP2Q9BSJ2 902 aa8.2□□□□□ -1.1
SUPT16H-204ENST00000555943 TNKS2Q9H2K2 1166 aa8.2□□□□□ -1.1
SUPT16H-204ENST00000555943 MMRN2Q9H8L6 949 aa8.2□□□□□ -1.1
SUPT16H-204ENST00000555943 PDE11AQ9HCR9 933 aa8.2□□□□□ -1.1
SUPT16H-204ENST00000555943 SLC38A7Q9NVC3 462 aa8.2□□□□□ -1.1
SUPT16H-204ENST00000555943 INSL6Q9Y581 213 aa8.2□□□□□ -1.1
SUPT16H-204ENST00000555943 MTCH2Q9Y6C9 303 aa8.2□□□□□ -1.1
SUPT16H-204ENST00000555943 COL4A6Q14031 1691 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 A0A1W2PQH9 124 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 TTC26A0AVF1 554 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 ARL5CA6NH57 179 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 TBKBP1A7MCY6 615 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 RGS13O14921 159 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 CBFA2T2O43439 604 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 KLF4O43474 513 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 FAM189A1O60320 539 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 N4BP1O75113 896 aaKnown RBP8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 AFPP02771 609 aaKnown RBP8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 THP07101 528 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 ZNF18P17022 549 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 GTF2H1P32780 548 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 MLH1P40692 756 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 ERVK-21P61565 698 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 TFAMQ00059 246 aaKnown RBP8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 RNASELQ05823 741 aaKnown RBP8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 ENPEPQ07075 957 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 BIRC3Q13489 604 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 KRT31Q15323 416 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 PPP2R5EQ16537 467 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 TCTN1Q2MV58 587 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 VWA3BQ502W6 1294 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 NOMO2Q5JPE7 1267 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 FKBP15Q5T1M5 1219 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 JADE1Q6IE81 842 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 IRF2BP1Q8IU81 584 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 WDR49Q8IV35 697 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 CCDC150Q8NCX0 1101 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 BEST2Q8NFU1 509 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 BAHD1Q8TBE0 780 aaPredicted RBP8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 ARNTL2Q8WYA1 636 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 RSPH1Q8WYR4 309 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 SNX27Q96L92 541 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 CCDC74BQ96LY2 380 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 CGRRF1Q99675 332 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 MIPEPQ99797 713 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 C1QTNF1Q9BXJ1 281 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 MRPL9Q9BYD2 267 aaKnown RBP8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 TMEM117Q9H0C3 514 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 VPS16Q9H269 839 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 TAB2Q9NYJ8 693 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 STOML1Q9UBI4 398 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 UBQLN1Q9UMX0 589 aaKnown RBP8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 DERAQ9Y315 318 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 C2CD2Q9Y426 696 aa8.19□□□□□ -1.1
SUPT16H-204ENST00000555943 PRRC2BQ5JSZ5 2229 aaKnown RBP8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 COL4A4P53420 1690 aaPredicted RBP8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 RALGAPA2Q2PPJ7 1873 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 SMIM28A0A1B0GU29 152 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 FAM86C2PA6NEL3 165 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 LRRIQ3A6PVS8 624 aaPredicted RBP8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 RBAK-RBAKDNI3L0D1 243 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 OFD1O75665 1012 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 SLITRK5O94991 958 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 POMCP01189 267 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 KRT19P08727 400 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 TRIM49P0CI25 452 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 TRIM49CP0CI26 452 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 FGFR1P11362 822 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 ATP1A3P13637 1013 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 KCNE1P15382 129 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 ATF7P17544 494 aaPredicted RBP8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 GCLMP48507 274 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 MXI1P50539 228 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 SCNN1GP51170 649 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 COPB1P53618 953 aaKnown RBP8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 UBASH3AP57075 661 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 DLG4P78352 724 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 DEFB103AP81534 67 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 HTRA4P83105 476 aaPredicted RBP8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 MYL7Q01449 175 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 GRIK3Q13003 919 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 TRPC3Q13507 836 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 DOC2BQ14184 412 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 GLRA4Q5JXX5 417 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 LMBRD2Q68DH5 695 aaPredicted RBP8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 KRT39Q6A163 491 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 UNC5AQ6ZN44 842 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 TRIM59Q8IWR1 403 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 TOP6BLQ8N6T0 577 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 ANP32BQ92688 251 aaKnown RBP8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 GATA6Q92908 595 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 TOP1MTQ969P6 601 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 SLC35C1Q96A29 364 aa8.18□□□□□ -1.1
SUPT16H-204ENST00000555943 BORCS6Q96GS4 357 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms