RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 DLDP09622 509 aaKnown RBP4.68□□□□□ -1.66
SCFD1-216ENST00000555550 CYP2A6P11509 494 aaPredicted RBP4.68□□□□□ -1.66
SCFD1-216ENST00000555550 PRF1P14222 555 aa4.68□□□□□ -1.66
SCFD1-216ENST00000555550 ZKSCAN1P17029 563 aaPredicted RBP4.68□□□□□ -1.66
SCFD1-216ENST00000555550 EN2P19622 333 aaPredicted RBP4.68□□□□□ -1.66
SCFD1-216ENST00000555550 KCNA3P22001 575 aa4.68□□□□□ -1.66
SCFD1-216ENST00000555550 SCP2P22307 547 aa4.68□□□□□ -1.66
SCFD1-216ENST00000555550 SUMO3P55854 103 aaPredicted RBP4.68□□□□□ -1.66
SCFD1-216ENST00000555550 MLC1Q15049 377 aa4.68□□□□□ -1.66
SCFD1-216ENST00000555550 RBMS2Q15434 407 aaKnown RBP4.68□□□□□ -1.66
SCFD1-216ENST00000555550 NFE2Q16621 373 aaPredicted RBP4.68□□□□□ -1.66
SCFD1-216ENST00000555550 ZIK1Q3SY52 487 aaPredicted RBP4.68□□□□□ -1.66
SCFD1-216ENST00000555550 L1TD1Q5T7N2 865 aaKnown RBP4.68□□□□□ -1.66
SCFD1-216ENST00000555550 DCAF12L1Q5VU92 463 aa4.68□□□□□ -1.66
SCFD1-216ENST00000555550 DLK2Q6UY11 383 aa4.68□□□□□ -1.66
SCFD1-216ENST00000555550 GAS2L3Q86XJ1 694 aa4.68□□□□□ -1.66
SCFD1-216ENST00000555550 IZUMO1Q8IYV9 350 aa4.68□□□□□ -1.66
SCFD1-216ENST00000555550 SPARTQ8N0X7 666 aa4.68□□□□□ -1.66
SCFD1-216ENST00000555550 ABRAQ8N0Z2 381 aa4.68□□□□□ -1.66
SCFD1-216ENST00000555550 MAGEB6Q8N7X4 407 aa4.68□□□□□ -1.66
SCFD1-216ENST00000555550 ABHD11Q8NFV4 315 aa4.68□□□□□ -1.66
SCFD1-216ENST00000555550 C16orf52Q8NHV5 167 aa4.68□□□□□ -1.66
SCFD1-216ENST00000555550 PPP2R3CQ969Q6 453 aa4.68□□□□□ -1.66
SCFD1-216ENST00000555550 DAZAP1Q96EP5 407 aaKnown RBP4.68□□□□□ -1.66
SCFD1-216ENST00000555550 VCPIP1Q96JH7 1222 aa4.68□□□□□ -1.66
SCFD1-216ENST00000555550 FSD1LQ9BXM9 530 aa4.68□□□□□ -1.66
SCFD1-216ENST00000555550 ZNF518BQ9C0D4 1074 aa4.68□□□□□ -1.66
SCFD1-216ENST00000555550 ATP6V0A4Q9HBG4 840 aa4.68□□□□□ -1.66
SCFD1-216ENST00000555550 TPCN1Q9ULQ1 816 aa4.68□□□□□ -1.66
SCFD1-216ENST00000555550 SCAF8Q9UPN6 1271 aaKnown RBP4.68□□□□□ -1.66
SCFD1-216ENST00000555550 PAXBP1Q9Y5B6 917 aa4.68□□□□□ -1.66
SCFD1-216ENST00000555550 POC1B-GALNT4F8VUJ3 575 aa4.67□□□□□ -1.66
SCFD1-216ENST00000555550 PSMD9O00233 223 aa4.67□□□□□ -1.66
SCFD1-216ENST00000555550 TBX3O15119 743 aa4.67□□□□□ -1.66
SCFD1-216ENST00000555550 RGS10O43665 173 aa4.67□□□□□ -1.66
SCFD1-216ENST00000555550 LY6KQ17RY6 165 aa4.67□□□□□ -1.66
SCFD1-216ENST00000555550 CACHD1Q5VU97 1274 aa4.67□□□□□ -1.66
SCFD1-216ENST00000555550 CCDC149Q6ZUS6 474 aa4.67□□□□□ -1.66
SCFD1-216ENST00000555550 Q6ZWC4 215 aa4.67□□□□□ -1.66
SCFD1-216ENST00000555550 CAND1Q86VP6 1230 aaKnown RBP4.67□□□□□ -1.66
SCFD1-216ENST00000555550 TCEAL8Q8IYN2 117 aa4.67□□□□□ -1.66
SCFD1-216ENST00000555550 GALNT4Q8N4A0 578 aa4.67□□□□□ -1.66
SCFD1-216ENST00000555550 SOCS4Q8WXH5 440 aa4.67□□□□□ -1.66
SCFD1-216ENST00000555550 COQ8BQ96D53 544 aa4.67□□□□□ -1.66
SCFD1-216ENST00000555550 PPP1R9BQ96SB3 815 aa4.67□□□□□ -1.66
SCFD1-216ENST00000555550 C22orf23Q9BZE7 217 aa4.67□□□□□ -1.66
SCFD1-216ENST00000555550 DPH1Q9BZG8 443 aa4.67□□□□□ -1.66
SCFD1-216ENST00000555550 GBA2Q9HCG7 927 aaPredicted RBP4.67□□□□□ -1.66
SCFD1-216ENST00000555550 A1CFQ9NQ94 594 aaKnown RBP4.67□□□□□ -1.66
SCFD1-216ENST00000555550 CPNE7Q9UBL6 633 aa4.67□□□□□ -1.66
SCFD1-216ENST00000555550 SNX14Q9Y5W7 946 aa4.67□□□□□ -1.66
SCFD1-216ENST00000555550 USP19O94966 1318 aa4.67□□□□□ -1.66
SCFD1-216ENST00000555550 RASAL1O95294 804 aa4.66□□□□□ -1.66
SCFD1-216ENST00000555550 VNN1O95497 513 aa4.66□□□□□ -1.66
SCFD1-216ENST00000555550 PRKCBP05771 671 aa4.66□□□□□ -1.66
SCFD1-216ENST00000555550 TMEM191BP0C7N4 346 aa4.66□□□□□ -1.66
SCFD1-216ENST00000555550 HOXD9P28356 352 aaPredicted RBP4.66□□□□□ -1.66
SCFD1-216ENST00000555550 PRKAR1BP31321 381 aa4.66□□□□□ -1.66
SCFD1-216ENST00000555550 MTHFSP49914 203 aa4.66□□□□□ -1.66
SCFD1-216ENST00000555550 CACNB3P54284 484 aa4.66□□□□□ -1.66
SCFD1-216ENST00000555550 INSCQ1MX18 579 aa4.66□□□□□ -1.66
SCFD1-216ENST00000555550 CERCAMQ5T4B2 595 aa4.66□□□□□ -1.66
SCFD1-216ENST00000555550 NXNQ6DKJ4 435 aa4.66□□□□□ -1.66
SCFD1-216ENST00000555550 SWSAP1Q6NVH7 229 aa4.66□□□□□ -1.66
SCFD1-216ENST00000555550 SERPINA13PQ6UXR4 307 aa4.66□□□□□ -1.66
SCFD1-216ENST00000555550 DPY19L3Q6ZPD9 716 aa4.66□□□□□ -1.66
SCFD1-216ENST00000555550 ANKRD13AQ8IZ07 590 aa4.66□□□□□ -1.66
SCFD1-216ENST00000555550 KIAA0319LQ8IZA0 1049 aa4.66□□□□□ -1.66
SCFD1-216ENST00000555550 MYO1HQ8N1T3 1032 aa4.66□□□□□ -1.66
SCFD1-216ENST00000555550 SPSB4Q96A44 273 aa4.66□□□□□ -1.66
SCFD1-216ENST00000555550 STK31Q9BXU1 1019 aa4.66□□□□□ -1.66
SCFD1-216ENST00000555550 FOXP1Q9H334 677 aaPredicted RBP4.66□□□□□ -1.66
SCFD1-216ENST00000555550 SMURF2Q9HAU4 748 aa4.66□□□□□ -1.66
SCFD1-216ENST00000555550 TFCP2L1Q9NZI6 479 aa4.66□□□□□ -1.66
SCFD1-216ENST00000555550 HDAC9Q9UKV0 1011 aa4.66□□□□□ -1.66
SCFD1-216ENST00000555550 OGDHLQ9ULD0 1010 aa4.66□□□□□ -1.66
SCFD1-216ENST00000555550 TCF20Q9UGU0 1960 aaKnown RBP4.65□□□□□ -1.66
SCFD1-216ENST00000555550 LY6G6EA0A0G2JKS1 128 aa4.65□□□□□ -1.67
SCFD1-216ENST00000555550 GOLGA6CA6NDK9 693 aa4.65□□□□□ -1.67
SCFD1-216ENST00000555550 GOLGA6BA6NDN3 693 aa4.65□□□□□ -1.67
SCFD1-216ENST00000555550 CD8B2A6NJW9 211 aa4.65□□□□□ -1.67
SCFD1-216ENST00000555550 PYCARD-AS1I3L0S3 204 aa4.65□□□□□ -1.67
SCFD1-216ENST00000555550 AP4M1O00189 453 aa4.65□□□□□ -1.67
SCFD1-216ENST00000555550 SRGAP2O75044 1071 aa4.65□□□□□ -1.67
SCFD1-216ENST00000555550 MAP4K4O95819 1239 aaPredicted RBP4.65□□□□□ -1.67
SCFD1-216ENST00000555550 GOLGA6DP0CG33 693 aa4.65□□□□□ -1.67
SCFD1-216ENST00000555550 THBS3P49746 956 aa4.65□□□□□ -1.67
SCFD1-216ENST00000555550 ITGA8P53708 1063 aa4.65□□□□□ -1.67
SCFD1-216ENST00000555550 NANOS2P60321 138 aaKnown RBP4.65□□□□□ -1.67
SCFD1-216ENST00000555550 E2F1Q01094 437 aa4.65□□□□□ -1.67
SCFD1-216ENST00000555550 CCNIQ14094 377 aa4.65□□□□□ -1.67
SCFD1-216ENST00000555550 PTCHD3Q3KNS1 767 aa4.65□□□□□ -1.67
SCFD1-216ENST00000555550 C3orf38Q5JPI3 329 aa4.65□□□□□ -1.67
SCFD1-216ENST00000555550 RNF220Q5VTB9 566 aa4.65□□□□□ -1.67
SCFD1-216ENST00000555550 APOA5Q6Q788 366 aa4.65□□□□□ -1.67
SCFD1-216ENST00000555550 ZDHHC24Q6UX98 284 aa4.65□□□□□ -1.67
SCFD1-216ENST00000555550 TERB1Q8NA31 727 aa4.65□□□□□ -1.67
SCFD1-216ENST00000555550 OR56A3Q8NH54 315 aa4.65□□□□□ -1.67
SCFD1-216ENST00000555550 DNAJB14Q8TBM8 379 aa4.65□□□□□ -1.67
SCFD1-216ENST00000555550 PIGOQ8TEQ8 1089 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms