RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 GBA2Q9HCG7 927 aaPredicted RBP4.52□□□□□ -1.69
SNX6-204ENST00000555541 TRMT13Q9NUP7 481 aaKnown RBP4.52□□□□□ -1.69
SNX6-204ENST00000555541 CPA4Q9UI42 421 aa4.52□□□□□ -1.69
SNX6-204ENST00000555541 KRTAP9-6A8MVA2 160 aa4.51□□□□□ -1.69
SNX6-204ENST00000555541 SMAD6O43541 496 aaKnown RBP4.51□□□□□ -1.69
SNX6-204ENST00000555541 CTSAP10619 480 aa4.51□□□□□ -1.69
SNX6-204ENST00000555541 CYP19A1P11511 503 aaPredicted RBP4.51□□□□□ -1.69
SNX6-204ENST00000555541 XRCC6P12956 609 aaKnown RBP eCLIP4.51□□□□□ -1.69
SNX6-204ENST00000555541 NPR1P16066 1061 aa4.51□□□□□ -1.69
SNX6-204ENST00000555541 VCAM1P19320 739 aa4.51□□□□□ -1.69
SNX6-204ENST00000555541 DIO1P49895 249 aa4.51□□□□□ -1.69
SNX6-204ENST00000555541 RAB1AP62820 205 aa4.51□□□□□ -1.69
SNX6-204ENST00000555541 ERV3-1Q14264 604 aa4.51□□□□□ -1.69
SNX6-204ENST00000555541 LARS2Q15031 903 aaKnown RBP4.51□□□□□ -1.69
SNX6-204ENST00000555541 MGAT5BQ3V5L5 792 aa4.51□□□□□ -1.69
SNX6-204ENST00000555541 PLA1AQ53H76 456 aa4.51□□□□□ -1.69
SNX6-204ENST00000555541 TMTC4Q5T4D3 741 aa4.51□□□□□ -1.69
SNX6-204ENST00000555541 Q6ZTC4 211 aa4.51□□□□□ -1.69
SNX6-204ENST00000555541 LYZL4Q96KX0 146 aa4.51□□□□□ -1.69
SNX6-204ENST00000555541 SMURF2Q9HAU4 748 aa4.51□□□□□ -1.69
SNX6-204ENST00000555541 STAP2Q9UGK3 403 aa4.51□□□□□ -1.69
SNX6-204ENST00000555541 ZNF112Q9UJU3 913 aa4.51□□□□□ -1.69
SNX6-204ENST00000555541 GTPBP1O00178 669 aaKnown RBP4.5□□□□□ -1.69
SNX6-204ENST00000555541 CES2O00748 559 aa4.5□□□□□ -1.69
SNX6-204ENST00000555541 SPRY2O43597 315 aa4.5□□□□□ -1.69
SNX6-204ENST00000555541 KRT86O43790 486 aa4.5□□□□□ -1.69
SNX6-204ENST00000555541 GCATO75600 419 aa4.5□□□□□ -1.69
SNX6-204ENST00000555541 MT3P25713 68 aa4.5□□□□□ -1.69
SNX6-204ENST00000555541 HTR6P50406 440 aa4.5□□□□□ -1.69
SNX6-204ENST00000555541 BCAT1P54687 386 aa4.5□□□□□ -1.69
SNX6-204ENST00000555541 ZNF91Q05481 1191 aa4.5□□□□□ -1.69
SNX6-204ENST00000555541 HYAL1Q12794 435 aa4.5□□□□□ -1.69
SNX6-204ENST00000555541 KRT81Q14533 505 aa4.5□□□□□ -1.69
SNX6-204ENST00000555541 CCDC157Q569K6 752 aa4.5□□□□□ -1.69
SNX6-204ENST00000555541 PTCHD4Q6ZW05 846 aa4.5□□□□□ -1.69
SNX6-204ENST00000555541 PELI3Q8N2H9 469 aa4.5□□□□□ -1.69
SNX6-204ENST00000555541 CUL5Q93034 780 aa4.5□□□□□ -1.69
SNX6-204ENST00000555541 C1GALT1C1Q96EU7 318 aa4.5□□□□□ -1.69
SNX6-204ENST00000555541 NT5C1BQ96P26 610 aa4.5□□□□□ -1.69
SNX6-204ENST00000555541 DRG1Q9Y295 367 aaKnown RBP4.5□□□□□ -1.69
SNX6-204ENST00000555541 NOP58Q9Y2X3 529 aaKnown RBP4.5□□□□□ -1.69
SNX6-204ENST00000555541 TMEM233B4DJY2 109 aa4.49□□□□□ -1.69
SNX6-204ENST00000555541 M0R3H8 397 aa4.49□□□□□ -1.69
SNX6-204ENST00000555541 PSG1P11464 419 aa4.49□□□□□ -1.69
SNX6-204ENST00000555541 TNFRSF1BP20333 461 aa4.49□□□□□ -1.69
SNX6-204ENST00000555541 IBSPP21815 317 aaPredicted RBP4.49□□□□□ -1.69
SNX6-204ENST00000555541 COPB1P53618 953 aaKnown RBP4.49□□□□□ -1.69
SNX6-204ENST00000555541 KRT17Q04695 432 aa4.49□□□□□ -1.69
SNX6-204ENST00000555541 CCNIQ14094 377 aa4.49□□□□□ -1.69
SNX6-204ENST00000555541 FGL2Q14314 439 aa4.49□□□□□ -1.69
SNX6-204ENST00000555541 C4orf46Q504U0 113 aa4.49□□□□□ -1.69
SNX6-204ENST00000555541 ZDHHC24Q6UX98 284 aa4.49□□□□□ -1.69
SNX6-204ENST00000555541 UBE2Q1Q7Z7E8 422 aa4.49□□□□□ -1.69
SNX6-204ENST00000555541 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.49□□□□□ -1.69
SNX6-204ENST00000555541 KBTBD7Q8WVZ9 684 aa4.49□□□□□ -1.69
SNX6-204ENST00000555541 HOOK2Q96ED9 719 aa4.49□□□□□ -1.69
SNX6-204ENST00000555541 ZFYVE19Q96K21 471 aa4.49□□□□□ -1.69
SNX6-204ENST00000555541 TRIM5Q9C035 493 aa4.49□□□□□ -1.69
SNX6-204ENST00000555541 ZBTB40Q9NUA8 1239 aa4.49□□□□□ -1.69
SNX6-204ENST00000555541 PIH1D1Q9NWS0 290 aaKnown RBP4.49□□□□□ -1.69
SNX6-204ENST00000555541 GABBR1Q9UBS5 961 aa4.49□□□□□ -1.69
SNX6-204ENST00000555541 IP6K2Q9UHH9 426 aa4.49□□□□□ -1.69
SNX6-204ENST00000555541 ANKRD6Q9Y2G4 727 aa4.49□□□□□ -1.69
SNX6-204ENST00000555541 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.49□□□□□ -1.69
SNX6-204ENST00000555541 BTN3A1O00481 513 aa4.48□□□□□ -1.69
SNX6-204ENST00000555541 PF4V1P10720 104 aa4.48□□□□□ -1.69
SNX6-204ENST00000555541 ID2Q02363 134 aa4.48□□□□□ -1.69
SNX6-204ENST00000555541 ZNF267Q14586 743 aaPredicted RBP4.48□□□□□ -1.69
SNX6-204ENST00000555541 UBAP2Q5T6F2 1119 aaKnown RBP4.48□□□□□ -1.69
SNX6-204ENST00000555541 RANBP10Q6VN20 620 aa4.48□□□□□ -1.69
SNX6-204ENST00000555541 COL23A1Q86Y22 540 aaPredicted RBP4.48□□□□□ -1.69
SNX6-204ENST00000555541 ACRBPQ8NEB7 543 aa4.48□□□□□ -1.69
SNX6-204ENST00000555541 DIS3LQ8TF46 1054 aaKnown RBP4.48□□□□□ -1.69
SNX6-204ENST00000555541 RAPGEF4Q8WZA2 1011 aa4.48□□□□□ -1.69
SNX6-204ENST00000555541 MAML1Q92585 1016 aa4.48□□□□□ -1.69
SNX6-204ENST00000555541 WDYHV1Q96HA8 205 aa4.48□□□□□ -1.69
SNX6-204ENST00000555541 MAP3K14Q99558 947 aa4.48□□□□□ -1.69
SNX6-204ENST00000555541 MS4A7Q9GZW8 240 aaPredicted RBP4.48□□□□□ -1.69
SNX6-204ENST00000555541 XPNPEP3Q9NQH7 507 aa4.48□□□□□ -1.69
SNX6-204ENST00000555541 AASDHPPTQ9NRN7 309 aa4.48□□□□□ -1.69
SNX6-204ENST00000555541 POT1Q9NUX5 634 aa4.48□□□□□ -1.69
SNX6-204ENST00000555541 TYW1Q9NV66 732 aaKnown RBP4.48□□□□□ -1.69
SNX6-204ENST00000555541 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.48□□□□□ -1.69
SNX6-204ENST00000555541 DNMT3BQ9UBC3 853 aaKnown RBP4.48□□□□□ -1.69
SNX6-204ENST00000555541 FAM90A8PA6NJQ4 464 aa4.47□□□□□ -1.69
SNX6-204ENST00000555541 CRYABP02511 175 aaKnown RBP4.47□□□□□ -1.69
SNX6-204ENST00000555541 FAM90A13PP0C7W8 464 aa4.47□□□□□ -1.69
SNX6-204ENST00000555541 FAM90A24PP0C7X0 464 aa4.47□□□□□ -1.69
SNX6-204ENST00000555541 PRKAG1P54619 331 aa4.47□□□□□ -1.69
SNX6-204ENST00000555541 TIRAPP58753 221 aa4.47□□□□□ -1.69
SNX6-204ENST00000555541 SUMO2P61956 95 aaKnown RBP4.47□□□□□ -1.69
SNX6-204ENST00000555541 TIAL1Q01085 375 aaKnown RBP eCLIP4.47□□□□□ -1.69
SNX6-204ENST00000555541 SATB1Q01826 763 aa4.47□□□□□ -1.69
SNX6-204ENST00000555541 MLC1Q15049 377 aa4.47□□□□□ -1.69
SNX6-204ENST00000555541 CERCAMQ5T4B2 595 aa4.47□□□□□ -1.69
SNX6-204ENST00000555541 LMBRD2Q68DH5 695 aaPredicted RBP4.47□□□□□ -1.69
SNX6-204ENST00000555541 GRAMD1CQ8IYS0 662 aa4.47□□□□□ -1.69
SNX6-204ENST00000555541 ARFGAP1Q8N6T3 406 aa4.47□□□□□ -1.69
SNX6-204ENST00000555541 MAFAQ8NHW3 353 aaPredicted RBP4.47□□□□□ -1.69
SNX6-204ENST00000555541 MTFMTQ96DP5 389 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms