RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 A0A087WUV0 522 aaPredicted RBP25.37■■□□□ 1.65
TMEM260-207ENST00000555497 CDH16O75309 829 aa25.37■■□□□ 1.65
TMEM260-207ENST00000555497 IGFBP6P24592 240 aaPredicted RBP25.37■■□□□ 1.65
TMEM260-207ENST00000555497 LRRC14Q15048 493 aa25.37■■□□□ 1.65
TMEM260-207ENST00000555497 NOMO1Q15155 1222 aa25.37■■□□□ 1.65
TMEM260-207ENST00000555497 FNBP1LQ5T0N5 605 aa25.37■■□□□ 1.65
TMEM260-207ENST00000555497 CPLX4Q7Z7G2 160 aa25.37■■□□□ 1.65
TMEM260-207ENST00000555497 ZC3H18Q86VM9 953 aaKnown RBP25.37■■□□□ 1.65
TMEM260-207ENST00000555497 PPIL6Q8IXY8 311 aa25.37■■□□□ 1.65
TMEM260-207ENST00000555497 MAK16Q9BXY0 300 aaKnown RBP25.37■■□□□ 1.65
TMEM260-207ENST00000555497 MANSC4A6NHS7 340 aaPredicted RBP25.36■■□□□ 1.65
TMEM260-207ENST00000555497 MCF2LO15068 1137 aa25.36■■□□□ 1.65
TMEM260-207ENST00000555497 CTGFP29279 349 aa25.36■■□□□ 1.65
TMEM260-207ENST00000555497 RGS2P41220 211 aa25.36■■□□□ 1.65
TMEM260-207ENST00000555497 HDAC4P56524 1084 aa25.36■■□□□ 1.65
TMEM260-207ENST00000555497 LIMS2Q7Z4I7 341 aa25.36■■□□□ 1.65
TMEM260-207ENST00000555497 ANKMY2Q8IV38 441 aa25.36■■□□□ 1.65
TMEM260-207ENST00000555497 ANKRD52Q8NB46 1076 aa25.36■■□□□ 1.65
TMEM260-207ENST00000555497 MGARPQ8TDB4 240 aa25.36■■□□□ 1.65
TMEM260-207ENST00000555497 CCDC77Q9BR77 488 aa25.36■■□□□ 1.65
TMEM260-207ENST00000555497 CCDC134Q9H6E4 229 aa25.36■■□□□ 1.65
TMEM260-207ENST00000555497 Q9Y3F1 56 aa25.36■■□□□ 1.65
TMEM260-207ENST00000555497 ATP5DP30049 168 aa25.36■■□□□ 1.65
TMEM260-207ENST00000555497 SDC4P31431 198 aa25.36■■□□□ 1.65
TMEM260-207ENST00000555497 C1orf228Q6PIY5 440 aa25.36■■□□□ 1.65
TMEM260-207ENST00000555497 CENPUQ71F23 418 aa25.36■■□□□ 1.65
TMEM260-207ENST00000555497 SPATS2Q86XZ4 545 aaKnown RBP25.36■■□□□ 1.65
TMEM260-207ENST00000555497 LRRC34Q8IZ02 419 aa25.36■■□□□ 1.65
TMEM260-207ENST00000555497 PQLC3Q8N755 202 aa25.36■■□□□ 1.65
TMEM260-207ENST00000555497 TRPV1Q8NER1 839 aa25.36■■□□□ 1.65
TMEM260-207ENST00000555497 MAML1Q92585 1016 aa25.36■■□□□ 1.65
TMEM260-207ENST00000555497 TTC25Q96NG3 672 aa25.36■■□□□ 1.65
TMEM260-207ENST00000555497 WDR83Q9BRX9 315 aaKnown RBP25.36■■□□□ 1.65
TMEM260-207ENST00000555497 SNRNP25Q9BV90 132 aaKnown RBP25.36■■□□□ 1.65
TMEM260-207ENST00000555497 NMRK2Q9NPI5 230 aa25.36■■□□□ 1.65
TMEM260-207ENST00000555497 GGA2Q9UJY4 613 aa25.36■■□□□ 1.65
TMEM260-207ENST00000555497 TMEM63AO94886 807 aa25.35■■□□□ 1.65
TMEM260-207ENST00000555497 IFT88Q13099 833 aa25.35■■□□□ 1.65
TMEM260-207ENST00000555497 KRT81Q14533 505 aa25.35■■□□□ 1.65
TMEM260-207ENST00000555497 HIF1AQ16665 826 aa25.35■■□□□ 1.65
TMEM260-207ENST00000555497 PCGF5Q86SE9 256 aa25.35■■□□□ 1.65
TMEM260-207ENST00000555497 FAM228AQ86W67 206 aa25.35■■□□□ 1.65
TMEM260-207ENST00000555497 APBA2Q99767 749 aa25.35■■□□□ 1.65
TMEM260-207ENST00000555497 PCDH18Q9HCL0 1135 aa25.35■■□□□ 1.65
TMEM260-207ENST00000555497 TAF6P49848 677 aa25.35■■□□□ 1.65
TMEM260-207ENST00000555497 ATXN1P54253 815 aaKnown RBP25.35■■□□□ 1.65
TMEM260-207ENST00000555497 GPX6P59796 221 aa25.35■■□□□ 1.65
TMEM260-207ENST00000555497 BST2Q10589 180 aaKnown RBP25.35■■□□□ 1.65
TMEM260-207ENST00000555497 BOLA3Q53S33 107 aa25.35■■□□□ 1.65
TMEM260-207ENST00000555497 OSTM1Q86WC4 334 aa25.35■■□□□ 1.65
TMEM260-207ENST00000555497 IFNL1Q8IU54 200 aa25.35■■□□□ 1.65
TMEM260-207ENST00000555497 PLD5Q8N7P1 536 aa25.35■■□□□ 1.65
TMEM260-207ENST00000555497 P3H4Q92791 437 aa25.35■■□□□ 1.65
TMEM260-207ENST00000555497 MAGEB5Q9BZ81 275 aa25.35■■□□□ 1.65
TMEM260-207ENST00000555497 SNX25Q9H3E2 840 aa25.35■■□□□ 1.65
TMEM260-207ENST00000555497 VPS37BQ9H9H4 285 aa25.35■■□□□ 1.65
TMEM260-207ENST00000555497 MLXIPLQ9NP71 852 aa25.35■■□□□ 1.65
TMEM260-207ENST00000555497 ATXN2Q99700 1313 aaKnown RBP25.34■■□□□ 1.65
TMEM260-207ENST00000555497 EXOC1LA0A1B0GW35 172 aa25.34■■□□□ 1.65
TMEM260-207ENST00000555497 PTGESO14684 152 aa25.34■■□□□ 1.65
TMEM260-207ENST00000555497 LCP1P13796 627 aa25.34■■□□□ 1.65
TMEM260-207ENST00000555497 BRAFP15056 766 aa25.34■■□□□ 1.65
TMEM260-207ENST00000555497 TKTP29401 623 aaKnown RBP25.34■■□□□ 1.65
TMEM260-207ENST00000555497 MTM1Q13496 603 aa25.34■■□□□ 1.65
TMEM260-207ENST00000555497 DARS2Q6PI48 645 aaKnown RBP25.34■■□□□ 1.65
TMEM260-207ENST00000555497 SRRM1Q8IYB3 904 aaKnown RBP25.34■■□□□ 1.65
TMEM260-207ENST00000555497 PCDH19Q8TAB3 1148 aa25.34■■□□□ 1.65
TMEM260-207ENST00000555497 SLC2A14Q8TDB8 520 aa25.34■■□□□ 1.65
TMEM260-207ENST00000555497 ZNF560Q96MR9 790 aa25.34■■□□□ 1.65
TMEM260-207ENST00000555497 C11orf84Q9BUA3 381 aaPredicted RBP25.34■■□□□ 1.65
TMEM260-207ENST00000555497 KATNAL1Q9BW62 490 aa25.34■■□□□ 1.65
TMEM260-207ENST00000555497 RASSF4Q9H2L5 321 aa25.34■■□□□ 1.65
TMEM260-207ENST00000555497 KCNK9Q9NPC2 374 aa25.34■■□□□ 1.65
TMEM260-207ENST00000555497 CLUHO75153 1309 aa25.34■■□□□ 1.65
TMEM260-207ENST00000555497 TRPM7Q96QT4 1865 aa25.34■■□□□ 1.65
TMEM260-207ENST00000555497 LILRA4P59901 499 aa25.33■■□□□ 1.65
TMEM260-207ENST00000555497 ROR1Q01973 937 aa25.33■■□□□ 1.65
TMEM260-207ENST00000555497 TFDP2Q14188 446 aa25.33■■□□□ 1.65
TMEM260-207ENST00000555497 TMED2Q15363 201 aa25.33■■□□□ 1.65
TMEM260-207ENST00000555497 MICALCLQ6ZW33 695 aa25.33■■□□□ 1.65
TMEM260-207ENST00000555497 NME8Q8N427 588 aa25.33■■□□□ 1.65
TMEM260-207ENST00000555497 ANKRD42Q8N9B4 389 aa25.33■■□□□ 1.65
TMEM260-207ENST00000555497 APPL2Q8NEU8 664 aa25.33■■□□□ 1.65
TMEM260-207ENST00000555497 TEKT4Q8WW24 435 aa25.33■■□□□ 1.65
TMEM260-207ENST00000555497 ZFP42Q96MM3 310 aa25.33■■□□□ 1.65
TMEM260-207ENST00000555497 CACNG4Q9UBN1 327 aa25.33■■□□□ 1.65
TMEM260-207ENST00000555497 MEIS3P2A8K0S8 358 aa25.33■■□□□ 1.65
TMEM260-207ENST00000555497 ATP2C2O75185 946 aa25.33■■□□□ 1.65
TMEM260-207ENST00000555497 RPL34P49207 117 aaKnown RBP25.33■■□□□ 1.65
TMEM260-207ENST00000555497 BCAT1P54687 386 aa25.33■■□□□ 1.65
TMEM260-207ENST00000555497 ADCY1Q08828 1119 aa25.33■■□□□ 1.65
TMEM260-207ENST00000555497 PDK2Q15119 407 aa25.33■■□□□ 1.65
TMEM260-207ENST00000555497 ANKRD20A8PQ5CZ79 823 aa25.33■■□□□ 1.65
TMEM260-207ENST00000555497 FAM47CQ5HY64 1035 aa25.33■■□□□ 1.65
TMEM260-207ENST00000555497 USP29Q9HBJ7 922 aa25.33■■□□□ 1.65
TMEM260-207ENST00000555497 UBN1Q9NPG3 1134 aa25.33■■□□□ 1.65
TMEM260-207ENST00000555497 POC1B-GALNT4F8VUJ3 575 aa25.32■■□□□ 1.64
TMEM260-207ENST00000555497 PNPLA4P41247 253 aa25.32■■□□□ 1.64
TMEM260-207ENST00000555497 MAGEA9P43362 315 aa25.32■■□□□ 1.64
TMEM260-207ENST00000555497 TWF2Q6IBS0 349 aaKnown RBP25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms