RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 IMPG2Q9BZV3 1241 aa24.8■■□□□ 1.56
STRN3-207ENST00000555358 SLC24A2Q9UI40 661 aa24.8■■□□□ 1.56
STRN3-207ENST00000555358 SCN10AQ9Y5Y9 1956 aa24.79■■□□□ 1.56
STRN3-207ENST00000555358 A0A1W2PPM1 405 aa24.79■■□□□ 1.56
STRN3-207ENST00000555358 IL18RAPO95256 599 aa24.79■■□□□ 1.56
STRN3-207ENST00000555358 FGFR1P11362 822 aa24.79■■□□□ 1.56
STRN3-207ENST00000555358 TARSP26639 723 aaKnown RBP24.79■■□□□ 1.56
STRN3-207ENST00000555358 CCND3P30281 292 aaPredicted RBP24.79■■□□□ 1.56
STRN3-207ENST00000555358 ZFYVE27Q5T4F4 411 aa24.79■■□□□ 1.56
STRN3-207ENST00000555358 TMEM237Q96Q45 408 aa24.79■■□□□ 1.56
STRN3-207ENST00000555358 TRPA1O75762 1119 aa24.78■■□□□ 1.56
STRN3-207ENST00000555358 TNNC2P02585 160 aa24.78■■□□□ 1.56
STRN3-207ENST00000555358 ITGAVP06756 1048 aa24.78■■□□□ 1.56
STRN3-207ENST00000555358 T-ENOLP0DO92 83 aa24.78■■□□□ 1.56
STRN3-207ENST00000555358 DARSP14868 501 aaKnown RBP24.78■■□□□ 1.56
STRN3-207ENST00000555358 CA4P22748 312 aa24.78■■□□□ 1.56
STRN3-207ENST00000555358 TRPC3Q13507 836 aa24.78■■□□□ 1.56
STRN3-207ENST00000555358 CENPUQ71F23 418 aa24.78■■□□□ 1.56
STRN3-207ENST00000555358 LRRC8CQ8TDW0 803 aa24.78■■□□□ 1.56
STRN3-207ENST00000555358 MCEEQ96PE7 176 aa24.78■■□□□ 1.56
STRN3-207ENST00000555358 MAK16Q9BXY0 300 aaKnown RBP24.78■■□□□ 1.56
STRN3-207ENST00000555358 PPCSQ9HAB8 311 aa24.78■■□□□ 1.56
STRN3-207ENST00000555358 CYLDQ9NQC7 956 aa24.78■■□□□ 1.56
STRN3-207ENST00000555358 PSMC3IPQ9P2W1 217 aaPredicted RBP24.78■■□□□ 1.56
STRN3-207ENST00000555358 HAO1Q9UJM8 370 aa24.78■■□□□ 1.56
STRN3-207ENST00000555358 SEPT4O43236 478 aa24.78■■□□□ 1.56
STRN3-207ENST00000555358 DCTN3O75935 186 aa24.78■■□□□ 1.56
STRN3-207ENST00000555358 HOXC8P31273 242 aa24.78■■□□□ 1.56
STRN3-207ENST00000555358 GPX6P59796 221 aa24.78■■□□□ 1.56
STRN3-207ENST00000555358 EFHC2Q5JST6 749 aa24.78■■□□□ 1.56
STRN3-207ENST00000555358 BZW1Q7L1Q6 419 aaKnown RBP24.78■■□□□ 1.56
STRN3-207ENST00000555358 AGGF1Q8N302 714 aaeCLIP24.78■■□□□ 1.56
STRN3-207ENST00000555358 INPP5DQ92835 1189 aa24.78■■□□□ 1.56
STRN3-207ENST00000555358 ACSF2Q96CM8 615 aaPredicted RBP24.78■■□□□ 1.56
STRN3-207ENST00000555358 HAUS1Q96CS2 278 aa24.78■■□□□ 1.56
STRN3-207ENST00000555358 ADPGKQ9BRR6 497 aa24.78■■□□□ 1.56
STRN3-207ENST00000555358 XYLT2Q9H1B5 865 aa24.78■■□□□ 1.56
STRN3-207ENST00000555358 PCDH9Q9HC56 1237 aa24.78■■□□□ 1.56
STRN3-207ENST00000555358 BATF3Q9NR55 127 aa24.78■■□□□ 1.56
STRN3-207ENST00000555358 SIX4Q9UIU6 781 aa24.78■■□□□ 1.56
STRN3-207ENST00000555358 BANF1O75531 89 aa24.77■■□□□ 1.56
STRN3-207ENST00000555358 NPTXRO95502 500 aa24.77■■□□□ 1.56
STRN3-207ENST00000555358 CDKN2BP42772 138 aa24.77■■□□□ 1.56
STRN3-207ENST00000555358 PDIA2Q13087 525 aaKnown RBP24.77■■□□□ 1.56
STRN3-207ENST00000555358 ANKRD20A2Q5SQ80 823 aa24.77■■□□□ 1.56
STRN3-207ENST00000555358 ANKRD20A1Q5TYW2 823 aa24.77■■□□□ 1.56
STRN3-207ENST00000555358 ANKRD20A3Q5VUR7 823 aa24.77■■□□□ 1.56
STRN3-207ENST00000555358 C1orf127Q8N9H9 656 aa24.77■■□□□ 1.56
STRN3-207ENST00000555358 SLC7A6OSQ96CW6 309 aaPredicted RBP24.77■■□□□ 1.56
STRN3-207ENST00000555358 TMEM121Q9BTD3 319 aa24.77■■□□□ 1.56
STRN3-207ENST00000555358 EIF2AQ9BY44 585 aaKnown RBP24.77■■□□□ 1.56
STRN3-207ENST00000555358 CXCL16Q9H2A7 254 aa24.77■■□□□ 1.56
STRN3-207ENST00000555358 FARP1Q9Y4F1 1045 aaPredicted RBP24.77■■□□□ 1.56
STRN3-207ENST00000555358 CEP83Q9Y592 693 aa24.77■■□□□ 1.56
STRN3-207ENST00000555358 CEP350Q5VT06 3117 aa24.77■■□□□ 1.56
STRN3-207ENST00000555358 CLUHO75153 1309 aa24.77■■□□□ 1.56
STRN3-207ENST00000555358 CALB1P05937 261 aa24.77■■□□□ 1.56
STRN3-207ENST00000555358 KRT19P08727 400 aa24.77■■□□□ 1.56
STRN3-207ENST00000555358 EIF4BP23588 611 aaKnown RBP24.77■■□□□ 1.56
STRN3-207ENST00000555358 CDC42EP1Q00587 391 aa24.77■■□□□ 1.56
STRN3-207ENST00000555358 SGSM1Q2NKQ1 1148 aa24.77■■□□□ 1.56
STRN3-207ENST00000555358 TFDP3Q5H9I0 405 aa24.77■■□□□ 1.56
STRN3-207ENST00000555358 PPP1R15BQ5SWA1 713 aa24.77■■□□□ 1.56
STRN3-207ENST00000555358 CREBZFQ9NS37 354 aa24.77■■□□□ 1.56
STRN3-207ENST00000555358 RARBP10826 455 aa24.76■■□□□ 1.55
STRN3-207ENST00000555358 SNX17Q15036 470 aa24.76■■□□□ 1.55
STRN3-207ENST00000555358 ZNF699Q32M78 642 aa24.76■■□□□ 1.55
STRN3-207ENST00000555358 SLC35B2Q8TB61 432 aa24.76■■□□□ 1.55
STRN3-207ENST00000555358 MRRFQ96E11 262 aaKnown RBP24.76■■□□□ 1.55
STRN3-207ENST00000555358 ACAP3Q96P50 834 aa24.76■■□□□ 1.55
STRN3-207ENST00000555358 MTG1Q9BT17 334 aaPredicted RBP24.76■■□□□ 1.55
STRN3-207ENST00000555358 ADAM33Q9BZ11 813 aa24.76■■□□□ 1.55
STRN3-207ENST00000555358 UPF3AQ9H1J1 476 aaKnown RBP24.76■■□□□ 1.55
STRN3-207ENST00000555358 SSU72Q9NP77 194 aaKnown RBP24.76■■□□□ 1.55
STRN3-207ENST00000555358 NKX1-2Q9UD57 310 aaPredicted RBP24.76■■□□□ 1.55
STRN3-207ENST00000555358 MYCNP04198 464 aaPredicted RBP24.76■■□□□ 1.55
STRN3-207ENST00000555358 PRKAR2AP13861 404 aaKnown RBP24.76■■□□□ 1.55
STRN3-207ENST00000555358 NBPF20Q3BBV1 942 aa24.76■■□□□ 1.55
STRN3-207ENST00000555358 DNAJC24Q6P3W2 148 aa24.76■■□□□ 1.55
STRN3-207ENST00000555358 SCARA5Q6ZMJ2 495 aa24.76■■□□□ 1.55
STRN3-207ENST00000555358 OTOAQ7RTW8 1153 aa24.76■■□□□ 1.55
STRN3-207ENST00000555358 RABGEF1Q9UJ41 708 aa24.76■■□□□ 1.55
STRN3-207ENST00000555358 ALDH3A1P30838 453 aa24.75■■□□□ 1.55
STRN3-207ENST00000555358 GAD2Q05329 585 aa24.75■■□□□ 1.55
STRN3-207ENST00000555358 LVRNQ6Q4G3 990 aa24.75■■□□□ 1.55
STRN3-207ENST00000555358 ANKMY2Q8IV38 441 aa24.75■■□□□ 1.55
STRN3-207ENST00000555358 CD99L2Q8TCZ2 262 aa24.75■■□□□ 1.55
STRN3-207ENST00000555358 ZNF75CPQ92670 426 aaPredicted RBP24.75■■□□□ 1.55
STRN3-207ENST00000555358 NIF3L1Q9GZT8 377 aa24.75■■□□□ 1.55
STRN3-207ENST00000555358 HES2Q9Y543 173 aa24.75■■□□□ 1.55
STRN3-207ENST00000555358 SGK1O00141 431 aa24.74■■□□□ 1.55
STRN3-207ENST00000555358 ADAMTS4O75173 837 aa24.74■■□□□ 1.55
STRN3-207ENST00000555358 ITGB3P05106 788 aa24.74■■□□□ 1.55
STRN3-207ENST00000555358 WEE2P0C1S8 567 aa24.74■■□□□ 1.55
STRN3-207ENST00000555358 GEMIN4P57678 1058 aaKnown RBP24.74■■□□□ 1.55
STRN3-207ENST00000555358 SPDYAQ5MJ70 313 aa24.74■■□□□ 1.55
STRN3-207ENST00000555358 HHATQ5VTY9 493 aa24.74■■□□□ 1.55
STRN3-207ENST00000555358 FAM13CQ8NE31 585 aa24.74■■□□□ 1.55
STRN3-207ENST00000555358 ASB7Q9H672 318 aa24.74■■□□□ 1.55
STRN3-207ENST00000555358 DDX56Q9NY93 547 aaKnown RBP24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms