RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 XPO1O14980 1071 aaKnown RBP11.33□□□□□ -0.6
TDP1-211ENST00000555178 PLA2G4AP47712 749 aa11.33□□□□□ -0.6
TDP1-211ENST00000555178 UBE3AQ05086 875 aa11.33□□□□□ -0.6
TDP1-211ENST00000555178 SMYD5Q6GMV2 418 aa11.33□□□□□ -0.6
TDP1-211ENST00000555178 EMC1Q8N766 993 aa11.33□□□□□ -0.6
TDP1-211ENST00000555178 JOSD2Q8TAC2 188 aa11.33□□□□□ -0.6
TDP1-211ENST00000555178 C18orf8Q96DM3 657 aa11.33□□□□□ -0.6
TDP1-211ENST00000555178 MCEEQ96PE7 176 aa11.33□□□□□ -0.6
TDP1-211ENST00000555178 NOX5Q96PH1 765 aa11.33□□□□□ -0.6
TDP1-211ENST00000555178 ADAM33Q9BZ11 813 aa11.33□□□□□ -0.6
TDP1-211ENST00000555178 METTL5Q9NRN9 209 aaKnown RBP11.33□□□□□ -0.6
TDP1-211ENST00000555178 AFF4Q9UHB7 1163 aaKnown RBP11.33□□□□□ -0.6
TDP1-211ENST00000555178 CALB1P05937 261 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 USP17L7P0C7H9 530 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 SETSIPP0DME0 302 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 GABRB2P47870 512 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 NRIP1P48552 1158 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 RPL34P49207 117 aaKnown RBP11.32□□□□□ -0.6
TDP1-211ENST00000555178 DNA2P51530 1060 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 OGDHQ02218 1023 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 NFE2Q16621 373 aaPredicted RBP11.32□□□□□ -0.6
TDP1-211ENST00000555178 OR6B2Q6IFH4 312 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 PLEKHA7Q6IQ23 1121 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 DNAJC24Q6P3W2 148 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 C4orf50Q6ZRC1 276 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 C12orf76Q8N812 135 aaPredicted RBP11.32□□□□□ -0.6
TDP1-211ENST00000555178 LRRC57Q8N9N7 239 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 ULBP1Q9BZM6 244 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 AVENQ9NQS1 362 aaPredicted RBP11.32□□□□□ -0.6
TDP1-211ENST00000555178 ANAPC7Q9UJX3 599 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 YIPF1Q9Y548 306 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 ATP1A1P05023 1023 aaKnown RBP11.32□□□□□ -0.6
TDP1-211ENST00000555178 MYBL1P10243 752 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 TFE3P19532 575 aaPredicted RBP11.32□□□□□ -0.6
TDP1-211ENST00000555178 TKTL1P51854 596 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 SLC5A3P53794 718 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 PITX1P78337 314 aaPredicted RBP11.32□□□□□ -0.6
TDP1-211ENST00000555178 ZNF252P-AS1Q0IIN9 211 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 MESDQ14696 234 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 RAB41Q5JT25 222 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 DNTTIP2Q5QJE6 756 aaKnown RBP11.32□□□□□ -0.6
TDP1-211ENST00000555178 PPP1R15BQ5SWA1 713 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 FAM102AQ5T9C2 384 aaPredicted RBP11.32□□□□□ -0.6
TDP1-211ENST00000555178 LIN9Q5TKA1 542 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 PRPF38BQ5VTL8 546 aaKnown RBP11.32□□□□□ -0.6
TDP1-211ENST00000555178 TMEM110Q86TL2 294 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 RHOT2Q8IXI1 618 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 TXLNBQ8N3L3 684 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 C3orf20Q8ND61 904 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 SLC7A14Q8TBB6 771 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 SPPL2BQ8TCT7 592 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 IPO4Q8TEX9 1081 aaKnown RBP11.32□□□□□ -0.6
TDP1-211ENST00000555178 VCPIP1Q96JH7 1222 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 IGFLR1Q9H665 355 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 NGRNQ9NPE2 291 aaKnown RBP11.32□□□□□ -0.6
TDP1-211ENST00000555178 DMAP1Q9NPF5 467 aaPredicted RBP11.32□□□□□ -0.6
TDP1-211ENST00000555178 HCFC1R1Q9NWW0 138 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 OSER1Q9NX31 292 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 FBXW11Q9UKB1 542 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 HCFC2Q9Y5Z7 792 aa11.32□□□□□ -0.6
TDP1-211ENST00000555178 YJEFN3A6XGL0 299 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 E7ENQ6 273 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 GLP2RO95838 553 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 RNASE9P60153 205 aaKnown RBP11.31□□□□□ -0.6
TDP1-211ENST00000555178 TWF1Q12792 350 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 MAPRE1Q15691 268 aaKnown RBP11.31□□□□□ -0.6
TDP1-211ENST00000555178 OLFML1Q6UWY5 402 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 DAAM2Q86T65 1068 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 HS6ST3Q8IZP7 471 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 RNF10Q8N5U6 811 aaKnown RBP11.31□□□□□ -0.6
TDP1-211ENST00000555178 KREMEN2Q8NCW0 462 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 TRIM11Q96F44 468 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 FUBP3Q96I24 572 aaKnown RBP eCLIP11.31□□□□□ -0.6
TDP1-211ENST00000555178 PSMB7Q99436 277 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 DNAI2Q9GZS0 605 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 NMUR1Q9HB89 426 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 ZNF334Q9HCZ1 680 aaPredicted RBP11.31□□□□□ -0.6
TDP1-211ENST00000555178 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.31□□□□□ -0.6
TDP1-211ENST00000555178 NUDT5Q9UKK9 219 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 INSL5Q9Y5Q6 135 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 PRRG1O14668 218 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 FYNP06241 537 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 HMGA1P17096 107 aaKnown RBP11.31□□□□□ -0.6
TDP1-211ENST00000555178 RFC1P35251 1148 aaPredicted RBP11.31□□□□□ -0.6
TDP1-211ENST00000555178 MAGEA11P43364 429 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 HYAL1Q12794 435 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 KCNC3Q14003 757 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 TCEAL5Q5H9L2 206 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 TPGS2Q68CL5 300 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 POTEHQ6S545 545 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 SCD5Q86SK9 330 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 TCEAL8Q8IYN2 117 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 MRPL38Q96DV4 380 aaKnown RBP11.31□□□□□ -0.6
TDP1-211ENST00000555178 MCRS1Q96EZ8 462 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 C8orf48Q96LL4 319 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 APOL5Q9BWW9 433 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 ABCB6Q9NP58 842 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 MAN1C1Q9NR34 630 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 PARVAQ9NVD7 372 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 CALCOCO1Q9P1Z2 691 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms