RNA–Protein interactions for RNA: ENST00000555116.5

SHMT2-217, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-217ENST00000555116 KLK7P49862 253 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 BST2Q10589 180 aaKnown RBP14.99□□□□□ -0.01
SHMT2-217ENST00000555116 GRM2Q14416 872 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 STILQ15468 1287 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 RAB41Q5JT25 222 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 FKBP15Q5T1M5 1219 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 SNX30Q5VWJ9 437 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 MFSD6LQ8IWD5 586 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 DEPDC1BQ8WUY9 529 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 CYP2S1Q96SQ9 504 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 GANQ9H2C0 597 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 ACP6Q9NPH0 428 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 HESX1Q9UBX0 185 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 CHORDC1Q9UHD1 332 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-217ENST00000555116 SCML2Q9UQR0 700 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 CCL26Q9Y258 94 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 USP3Q9Y6I4 520 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 FAM86C2PA6NEL3 165 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 TMEM221A6NGB7 291 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 M0R296 226 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 XPO1O14980 1071 aaKnown RBP14.99□□□□□ -0.01
SHMT2-217ENST00000555116 AP5Z1O43299 807 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 GPR37L1O60883 481 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 OAS1P00973 400 aaKnown RBP14.99□□□□□ -0.01
SHMT2-217ENST00000555116 UCHL3P15374 230 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 PSMC3P17980 439 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 AVPR1AP37288 418 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 PGFP49763 221 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 ZNF268Q14587 947 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-217ENST00000555116 LUZP1Q86V48 1076 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 ARL14EPQ8N8R7 260 aaPredicted RBP14.99□□□□□ -0.01
SHMT2-217ENST00000555116 C1QTNF1Q9BXJ1 281 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 F5P12259 2224 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 ZDBF2Q9HCK1 2354 aa14.99□□□□□ -0.01
SHMT2-217ENST00000555116 OLFM2O95897 454 aa14.98□□□□□ -0.01
SHMT2-217ENST00000555116 CFHP08603 1231 aa14.98□□□□□ -0.01
SHMT2-217ENST00000555116 USP17L7P0C7H9 530 aa14.98□□□□□ -0.01
SHMT2-217ENST00000555116 PNMA6AP0CW24 399 aaPredicted RBP14.98□□□□□ -0.01
SHMT2-217ENST00000555116 SETSIPP0DME0 302 aa14.98□□□□□ -0.01
SHMT2-217ENST00000555116 HDCP19113 662 aa14.98□□□□□ -0.01
SHMT2-217ENST00000555116 RFX1P22670 979 aa14.98□□□□□ -0.01
SHMT2-217ENST00000555116 USP8P40818 1118 aa14.98□□□□□ -0.01
SHMT2-217ENST00000555116 PLA2G4AP47712 749 aa14.98□□□□□ -0.01
SHMT2-217ENST00000555116 SLC8A3P57103 927 aa14.98□□□□□ -0.01
SHMT2-217ENST00000555116 FCHO2Q0JRZ9 810 aa14.98□□□□□ -0.01
SHMT2-217ENST00000555116 DRAP1Q14919 205 aaPredicted RBP14.98□□□□□ -0.01
SHMT2-217ENST00000555116 SYCP1Q15431 976 aa14.98□□□□□ -0.01
SHMT2-217ENST00000555116 FAM71AQ8IYT1 594 aa14.98□□□□□ -0.01
SHMT2-217ENST00000555116 CELF5Q8N6W0 485 aaKnown RBP14.98□□□□□ -0.01
SHMT2-217ENST00000555116 RIN3Q8TB24 985 aa14.98□□□□□ -0.01
SHMT2-217ENST00000555116 SLC35F5Q8WV83 523 aa14.98□□□□□ -0.01
SHMT2-217ENST00000555116 ERGIC2Q96RQ1 377 aa14.98□□□□□ -0.01
SHMT2-217ENST00000555116 TRMT61BQ9BVS5 477 aaKnown RBP14.98□□□□□ -0.01
SHMT2-217ENST00000555116 RNF38Q9H0F5 515 aa14.98□□□□□ -0.01
SHMT2-217ENST00000555116 TDP1Q9NUW8 608 aa14.98□□□□□ -0.01
SHMT2-217ENST00000555116 WNT16Q9UBV4 365 aa14.98□□□□□ -0.01
SHMT2-217ENST00000555116 DPYSL4O14531 572 aa14.97□□□□□ -0.01
SHMT2-217ENST00000555116 EPHB6O15197 1021 aa14.97□□□□□ -0.01
SHMT2-217ENST00000555116 CYP26A1O43174 497 aa14.97□□□□□ -0.01
SHMT2-217ENST00000555116 ABL1P00519 1130 aa14.97□□□□□ -0.01
SHMT2-217ENST00000555116 GNA15P30679 374 aa14.97□□□□□ -0.01
SHMT2-217ENST00000555116 UBXN1Q04323 297 aa14.97□□□□□ -0.01
SHMT2-217ENST00000555116 CCDC186Q7Z3E2 898 aa14.97□□□□□ -0.01
SHMT2-217ENST00000555116 ZNF606Q8WXB4 792 aa14.97□□□□□ -0.01
SHMT2-217ENST00000555116 KCTD13Q8WZ19 329 aa14.97□□□□□ -0.01
SHMT2-217ENST00000555116 SECISBP2LQ93073 1101 aaKnown RBP14.97□□□□□ -0.01
SHMT2-217ENST00000555116 KIF9Q9HAQ2 790 aa14.97□□□□□ -0.01
SHMT2-217ENST00000555116 M0QYV0 167 aa14.97□□□□□ -0.01
SHMT2-217ENST00000555116 THAP12O43422 761 aa14.97□□□□□ -0.01
SHMT2-217ENST00000555116 GABBR2O75899 941 aa14.97□□□□□ -0.01
SHMT2-217ENST00000555116 CKMP06732 381 aa14.97□□□□□ -0.01
SHMT2-217ENST00000555116 GDI1P31150 447 aa14.97□□□□□ -0.01
SHMT2-217ENST00000555116 TUBP50607 506 aa14.97□□□□□ -0.01
SHMT2-217ENST00000555116 PDE6CP51160 858 aa14.97□□□□□ -0.01
SHMT2-217ENST00000555116 SLC7A9P82251 487 aa14.97□□□□□ -0.01
SHMT2-217ENST00000555116 RAPGEF1Q13905 1077 aa14.97□□□□□ -0.01
SHMT2-217ENST00000555116 MEA1Q16626 185 aa14.97□□□□□ -0.01
SHMT2-217ENST00000555116 IER5LQ5T953 404 aa14.97□□□□□ -0.01
SHMT2-217ENST00000555116 DENND1BQ6P3S1 775 aa14.97□□□□□ -0.01
SHMT2-217ENST00000555116 SCD5Q86SK9 330 aa14.97□□□□□ -0.01
SHMT2-217ENST00000555116 BPIFB1Q8TDL5 484 aa14.97□□□□□ -0.01
SHMT2-217ENST00000555116 STK33Q9BYT3 514 aa14.97□□□□□ -0.01
SHMT2-217ENST00000555116 NMUR1Q9HB89 426 aa14.97□□□□□ -0.01
SHMT2-217ENST00000555116 TLR8Q9NR97 1041 aaKnown RBP14.97□□□□□ -0.01
SHMT2-217ENST00000555116 FAM207AQ9NSI2 230 aaPredicted RBP14.97□□□□□ -0.01
SHMT2-217ENST00000555116 OSER1Q9NX31 292 aa14.97□□□□□ -0.01
SHMT2-217ENST00000555116 ARHGAP26Q9UNA1 814 aa14.97□□□□□ -0.01
SHMT2-217ENST00000555116 COL4A3Q01955 1670 aa14.96□□□□□ -0.01
SHMT2-217ENST00000555116 ZNF318Q5VUA4 2279 aa14.96□□□□□ -0.01
SHMT2-217ENST00000555116 KRBA1A5PL33 1030 aa14.96□□□□□ -0.01
SHMT2-217ENST00000555116 ARNTLO00327 626 aa14.96□□□□□ -0.01
SHMT2-217ENST00000555116 TEX33O43247 280 aa14.96□□□□□ -0.01
SHMT2-217ENST00000555116 TCF3P15923 654 aa14.96□□□□□ -0.01
SHMT2-217ENST00000555116 ZXDBP98169 803 aa14.96□□□□□ -0.01
SHMT2-217ENST00000555116 PLCB2Q00722 1185 aa14.96□□□□□ -0.01
SHMT2-217ENST00000555116 USP4Q13107 963 aa14.96□□□□□ -0.01
SHMT2-217ENST00000555116 TMEM31Q5JXX7 168 aa14.96□□□□□ -0.01
SHMT2-217ENST00000555116 HECTD3Q5T447 861 aa14.96□□□□□ -0.01
SHMT2-217ENST00000555116 PM20D1Q6GTS8 502 aa14.96□□□□□ -0.01
SHMT2-217ENST00000555116 PMF1Q6P1K2 205 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms