RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 SIX6OS1Q8N1H7 587 aa10.73□□□□□ -0.69
SYNE2-215ENST00000554997 MICALL1Q8N3F8 863 aa10.73□□□□□ -0.69
SYNE2-215ENST00000554997 LEMD2Q8NC56 503 aa10.73□□□□□ -0.69
SYNE2-215ENST00000554997 OVCA2Q8WZ82 227 aa10.73□□□□□ -0.69
SYNE2-215ENST00000554997 IRGQQ8WZA9 623 aa10.73□□□□□ -0.69
SYNE2-215ENST00000554997 EIF3CQ99613 913 aaKnown RBP10.73□□□□□ -0.69
SYNE2-215ENST00000554997 ADAM7Q9H2U9 754 aa10.73□□□□□ -0.69
SYNE2-215ENST00000554997 SYNCQ9H7C4 482 aa10.73□□□□□ -0.69
SYNE2-215ENST00000554997 AVENQ9NQS1 362 aaPredicted RBP10.73□□□□□ -0.69
SYNE2-215ENST00000554997 CLDND1Q9NY35 253 aa10.73□□□□□ -0.69
SYNE2-215ENST00000554997 TAS2R14Q9NYV8 317 aa10.73□□□□□ -0.69
SYNE2-215ENST00000554997 WDR35Q9P2L0 1181 aa10.73□□□□□ -0.69
SYNE2-215ENST00000554997 DNMT3BQ9UBC3 853 aaKnown RBP10.73□□□□□ -0.69
SYNE2-215ENST00000554997 UXTQ9UBK9 157 aaPredicted RBP10.73□□□□□ -0.69
SYNE2-215ENST00000554997 CHORDC1Q9UHD1 332 aaPredicted RBP10.73□□□□□ -0.69
SYNE2-215ENST00000554997 STRIP2Q9ULQ0 834 aa10.73□□□□□ -0.69
SYNE2-215ENST00000554997 MAGED2Q9UNF1 606 aaPredicted RBP10.73□□□□□ -0.69
SYNE2-215ENST00000554997 ANKRD62A6NC57 917 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 PIK3R2O00459 728 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 ZNF263O14978 683 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 ARHGAP6O43182 974 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 PAPSS1O43252 624 aaPredicted RBP10.72□□□□□ -0.69
SYNE2-215ENST00000554997 SART1O43290 800 aaKnown RBP10.72□□□□□ -0.69
SYNE2-215ENST00000554997 NRDCO43847 1150 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 NDUFA10O95299 355 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 F11P03951 625 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 ERBB2P04626 1255 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 CALB1P05937 261 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 EPHA5P54756 1037 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 SLC6A3Q01959 620 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 DLX2Q07687 328 aaPredicted RBP10.72□□□□□ -0.69
SYNE2-215ENST00000554997 ADIGQ0VDE8 80 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 TAF10Q12962 218 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 SPA17Q15506 151 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 EFHC1Q5JVL4 640 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 ATAT1Q5SQI0 421 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 SNX30Q5VWJ9 437 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 CES5AQ6NT32 575 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 TMC5Q6UXY8 1006 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 MMS22LQ6ZRQ5 1243 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 MON1BQ7L1V2 547 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 ARHGAP18Q8N392 663 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 ZNF276Q8N554 614 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 IPO4Q8TEX9 1081 aaKnown RBP10.72□□□□□ -0.69
SYNE2-215ENST00000554997 SMG7Q92540 1137 aaKnown RBP10.72□□□□□ -0.69
SYNE2-215ENST00000554997 KHSRPQ92945 711 aaKnown RBP eCLIP10.72□□□□□ -0.69
SYNE2-215ENST00000554997 TRIM11Q96F44 468 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 MSLNLQ96KJ4 702 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 SLITRK1Q96PX8 696 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 CORO1BQ9BR76 489 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 ULBP1Q9BZM6 244 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 PIDD1Q9HB75 910 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 SPTLC3Q9NUV7 552 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 INTUQ9ULD6 942 aa10.72□□□□□ -0.69
SYNE2-215ENST00000554997 SOBPA7XYQ1 873 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 NCANO14594 1321 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 ZNF197O14709 1029 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 RHOP08100 348 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 GLI1P08151 1106 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 H2AFZP0C0S5 128 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 ZDHHC11BP0C7U3 371 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 MYBL1P10243 752 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 SCNN1AP37088 669 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 MAGEA1P43355 309 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 PSEN1P49768 467 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 GALCP54803 685 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 GSCP56915 257 aaPredicted RBP10.71□□□□□ -0.69
SYNE2-215ENST00000554997 DAOAP59103 153 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 YWHAZP63104 245 aaKnown RBP10.71□□□□□ -0.69
SYNE2-215ENST00000554997 GPC5P78333 572 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 KRT83P78385 493 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 CCZ1BP86790 482 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 CCZ1P86791 482 aaPredicted RBP10.71□□□□□ -0.69
SYNE2-215ENST00000554997 MTF1Q14872 753 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 C2CD6Q53TS8 623 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 RARS2Q5T160 578 aaKnown RBP10.71□□□□□ -0.69
SYNE2-215ENST00000554997 OR6B2Q6IFH4 312 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 EP400NLQ6ZTU2 488 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 H2AFVQ71UI9 128 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 BEND5Q7L4P6 421 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 ARCQ7LC44 396 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 GRASPQ7Z6J2 395 aaPredicted RBP10.71□□□□□ -0.69
SYNE2-215ENST00000554997 SCD5Q86SK9 330 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 TMEM150AQ86TG1 271 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 XYLT1Q86Y38 959 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 TMC8Q8IU68 726 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 HS6ST3Q8IZP7 471 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 STKLD1Q8NE28 680 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 PDZD8Q8NEN9 1154 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 NDRG1Q92597 394 aaKnown RBP10.71□□□□□ -0.69
SYNE2-215ENST00000554997 FBXO32Q969P5 355 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 MCRS1Q96EZ8 462 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 C11orf70Q9BRQ4 267 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 IL21Q9HBE4 155 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 ASAH2Q9NR71 780 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 TLR8Q9NR97 1041 aaKnown RBP10.71□□□□□ -0.69
SYNE2-215ENST00000554997 ASNSD1Q9NWL6 643 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 HCFC1R1Q9NWW0 138 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 CLIC5Q9NZA1 410 aa10.71□□□□□ -0.69
SYNE2-215ENST00000554997 TRPM5Q9NZQ8 1165 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms