RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 PGBD3Q8N328 593 aa25.74■■□□□ 1.71
FOXA1-204ENST00000554607 RDH13Q8NBN7 331 aa25.74■■□□□ 1.71
FOXA1-204ENST00000554607 GLIS3Q8NEA6 775 aa25.74■■□□□ 1.71
FOXA1-204ENST00000554607 ZNF507Q8TCN5 953 aa25.74■■□□□ 1.71
FOXA1-204ENST00000554607 HMGB4Q8WW32 186 aa25.74■■□□□ 1.71
FOXA1-204ENST00000554607 CGRRF1Q99675 332 aa25.74■■□□□ 1.71
FOXA1-204ENST00000554607 NME7Q9Y5B8 376 aa25.74■■□□□ 1.71
FOXA1-204ENST00000554607 A8MXQ7 604 aa25.73■■□□□ 1.71
FOXA1-204ENST00000554607 SCAMP3O14828 347 aaKnown RBP25.73■■□□□ 1.71
FOXA1-204ENST00000554607 STAU1O95793 577 aaKnown RBP25.73■■□□□ 1.71
FOXA1-204ENST00000554607 CHRM1P11229 460 aaPredicted RBP25.73■■□□□ 1.71
FOXA1-204ENST00000554607 SYT1P21579 422 aa25.73■■□□□ 1.71
FOXA1-204ENST00000554607 HOXD12P35452 270 aa25.73■■□□□ 1.71
FOXA1-204ENST00000554607 HOXD13P35453 343 aa25.73■■□□□ 1.71
FOXA1-204ENST00000554607 KDSRQ06136 332 aa25.73■■□□□ 1.71
FOXA1-204ENST00000554607 MESP2Q0VG99 397 aa25.73■■□□□ 1.71
FOXA1-204ENST00000554607 TRPC3Q13507 836 aa25.73■■□□□ 1.71
FOXA1-204ENST00000554607 PSMD6Q15008 389 aa25.73■■□□□ 1.71
FOXA1-204ENST00000554607 MAP7D1Q3KQU3 841 aa25.73■■□□□ 1.71
FOXA1-204ENST00000554607 LY6G5CQ5SRR4 150 aa25.73■■□□□ 1.71
FOXA1-204ENST00000554607 LYSMD4Q5XG99 296 aa25.73■■□□□ 1.71
FOXA1-204ENST00000554607 B3GALNT2Q8NCR0 500 aa25.73■■□□□ 1.71
FOXA1-204ENST00000554607 DEFB124Q8NES8 71 aa25.73■■□□□ 1.71
FOXA1-204ENST00000554607 HPS3Q969F9 1004 aa25.73■■□□□ 1.71
FOXA1-204ENST00000554607 FBXO32Q969P5 355 aa25.73■■□□□ 1.71
FOXA1-204ENST00000554607 USP28Q96RU2 1077 aa25.73■■□□□ 1.71
FOXA1-204ENST00000554607 B3GNT5Q9BYG0 378 aa25.73■■□□□ 1.71
FOXA1-204ENST00000554607 ZNF518BQ9C0D4 1074 aa25.73■■□□□ 1.71
FOXA1-204ENST00000554607 CUEDC2Q9H467 287 aa25.73■■□□□ 1.71
FOXA1-204ENST00000554607 DPEP3Q9H4B8 488 aa25.73■■□□□ 1.71
FOXA1-204ENST00000554607 FAM208BQ5VWN6 2430 aa25.73■■□□□ 1.71
FOXA1-204ENST00000554607 ATP8B3O60423 1300 aa25.72■■□□□ 1.71
FOXA1-204ENST00000554607 TCRBV21S2A2A0A5A6 115 aa25.72■■□□□ 1.71
FOXA1-204ENST00000554607 TBC1D3BA6NDS4 549 aa25.72■■□□□ 1.71
FOXA1-204ENST00000554607 SPINK2P20155 84 aa25.72■■□□□ 1.71
FOXA1-204ENST00000554607 ATICP31939 592 aa25.72■■□□□ 1.71
FOXA1-204ENST00000554607 PTGER3P43115 390 aa25.72■■□□□ 1.71
FOXA1-204ENST00000554607 CACNA2D1P54289 1103 aa25.72■■□□□ 1.71
FOXA1-204ENST00000554607 HECTD3Q5T447 861 aa25.72■■□□□ 1.71
FOXA1-204ENST00000554607 SLC23A3Q6PIS1 610 aa25.72■■□□□ 1.71
FOXA1-204ENST00000554607 ARMCX6Q7L4S7 300 aa25.72■■□□□ 1.71
FOXA1-204ENST00000554607 CCDC127Q96BQ5 260 aa25.72■■□□□ 1.71
FOXA1-204ENST00000554607 AGPAT3Q9NRZ7 376 aa25.72■■□□□ 1.71
FOXA1-204ENST00000554607 KBTBD4Q9NVX7 518 aa25.72■■□□□ 1.71
FOXA1-204ENST00000554607 MBD1Q9UIS9 605 aaPredicted RBP25.72■■□□□ 1.71
FOXA1-204ENST00000554607 SH3BP1Q9Y3L3 701 aa25.72■■□□□ 1.71
FOXA1-204ENST00000554607 MYOFQ9NZM1 2061 aa25.72■■□□□ 1.71
FOXA1-204ENST00000554607 ADAM23O75077 832 aa25.71■■□□□ 1.71
FOXA1-204ENST00000554607 ENGP17813 658 aa25.71■■□□□ 1.71
FOXA1-204ENST00000554607 MAPK8P45983 427 aa25.71■■□□□ 1.71
FOXA1-204ENST00000554607 CYP24A1Q07973 514 aa25.71■■□□□ 1.71
FOXA1-204ENST00000554607 SNX30Q5VWJ9 437 aa25.71■■□□□ 1.71
FOXA1-204ENST00000554607 EPM2AIP1Q7L775 607 aaPredicted RBP25.71■■□□□ 1.71
FOXA1-204ENST00000554607 XXYLT1Q8NBI6 393 aa25.71■■□□□ 1.71
FOXA1-204ENST00000554607 CEP76Q8TAP6 659 aa25.71■■□□□ 1.71
FOXA1-204ENST00000554607 SYAP1Q96A49 352 aaPredicted RBP25.71■■□□□ 1.71
FOXA1-204ENST00000554607 DUSP9Q99956 384 aaKnown RBP25.71■■□□□ 1.71
FOXA1-204ENST00000554607 SCNM1Q9BWG6 230 aa25.71■■□□□ 1.71
FOXA1-204ENST00000554607 TMEM121BQ9BXQ6 578 aaPredicted RBP25.71■■□□□ 1.71
FOXA1-204ENST00000554607 TRIM9Q9C026 710 aa25.71■■□□□ 1.71
FOXA1-204ENST00000554607 TMEM74BQ9NUR3 256 aa25.71■■□□□ 1.71
FOXA1-204ENST00000554607 TMEM30AQ9NV96 361 aa25.71■■□□□ 1.71
FOXA1-204ENST00000554607 DEC1Q9P2X7 70 aa25.71■■□□□ 1.71
FOXA1-204ENST00000554607 PILRBQ9UKJ0 227 aa25.71■■□□□ 1.71
FOXA1-204ENST00000554607 CACNA1GO43497 2377 aa25.71■■□□□ 1.71
FOXA1-204ENST00000554607 ASCC3Q8N3C0 2202 aaKnown RBP25.71■■□□□ 1.71
FOXA1-204ENST00000554607 CLDN5O00501 218 aa25.7■■□□□ 1.7
FOXA1-204ENST00000554607 HOXC11O43248 304 aaPredicted RBP25.7■■□□□ 1.7
FOXA1-204ENST00000554607 AP5Z1O43299 807 aa25.7■■□□□ 1.7
FOXA1-204ENST00000554607 COCHO43405 550 aa25.7■■□□□ 1.7
FOXA1-204ENST00000554607 TUBP50607 506 aa25.7■■□□□ 1.7
FOXA1-204ENST00000554607 PEAR1Q5VY43 1037 aaPredicted RBP25.7■■□□□ 1.7
FOXA1-204ENST00000554607 SLC36A4Q6YBV0 504 aa25.7■■□□□ 1.7
FOXA1-204ENST00000554607 PHTF2Q8N3S3 785 aa25.7■■□□□ 1.7
FOXA1-204ENST00000554607 FRMD1Q8N878 549 aa25.7■■□□□ 1.7
FOXA1-204ENST00000554607 ZSCAN16Q9H4T2 348 aaPredicted RBP25.7■■□□□ 1.7
FOXA1-204ENST00000554607 COMMD8Q9NX08 183 aa25.7■■□□□ 1.7
FOXA1-204ENST00000554607 NXF1Q9UBU9 619 aaKnown RBP25.7■■□□□ 1.7
FOXA1-204ENST00000554607 CHORDC1Q9UHD1 332 aaPredicted RBP25.7■■□□□ 1.7
FOXA1-204ENST00000554607 UBE4BO95155 1302 aa25.69■■□□□ 1.7
FOXA1-204ENST00000554607 ZBTB24O43167 697 aaPredicted RBP25.69■■□□□ 1.7
FOXA1-204ENST00000554607 TGFB1I1O43294 461 aa25.69■■□□□ 1.7
FOXA1-204ENST00000554607 CYP2J2P51589 502 aa25.69■■□□□ 1.7
FOXA1-204ENST00000554607 ATXN3P54252 364 aaPredicted RBP25.69■■□□□ 1.7
FOXA1-204ENST00000554607 ASIC1P78348 528 aa25.69■■□□□ 1.7
FOXA1-204ENST00000554607 DUOXA1Q1HG43 343 aa25.69■■□□□ 1.7
FOXA1-204ENST00000554607 FAM26FQ5R3K3 315 aa25.69■■□□□ 1.7
FOXA1-204ENST00000554607 RABEPKQ7Z6M1 372 aa25.69■■□□□ 1.7
FOXA1-204ENST00000554607 ETFBKMTQ8IXQ9 262 aa25.69■■□□□ 1.7
FOXA1-204ENST00000554607 ZNF513Q8N8E2 541 aaPredicted RBP25.69■■□□□ 1.7
FOXA1-204ENST00000554607 ZFRQ96KR1 1074 aaKnown RBP25.69■■□□□ 1.7
FOXA1-204ENST00000554607 RALYQ9UKM9 306 aaKnown RBP25.69■■□□□ 1.7
FOXA1-204ENST00000554607 SLC6A14Q9UN76 642 aa25.69■■□□□ 1.7
FOXA1-204ENST00000554607 GON4LQ3T8J9 2241 aa25.69■■□□□ 1.7
FOXA1-204ENST00000554607 PI4KAP42356 2102 aa25.69■■□□□ 1.7
FOXA1-204ENST00000554607 PLXND1Q9Y4D7 1925 aa25.69■■□□□ 1.7
FOXA1-204ENST00000554607 MYO18AQ92614 2054 aaKnown RBP25.68■■□□□ 1.7
FOXA1-204ENST00000554607 UPK3BL1B0FP48 263 aa25.68■■□□□ 1.7
FOXA1-204ENST00000554607 UPK3BL2E5RIL1 263 aa25.68■■□□□ 1.7
FOXA1-204ENST00000554607 CLIC2O15247 247 aa25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms