RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 MSANTD3Q96H12 275 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 TMEM176AQ96HP8 235 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 FAXDC2Q96IV6 333 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 CNOT6LQ96LI5 555 aaKnown RBP11.27□□□□□ -0.61
SHMT2-213ENST00000554600 PHOX2BQ99453 314 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 DUSP16Q9BY84 665 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 FBXO44Q9H4M3 255 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 LMAN1LQ9HAT1 526 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 LMBRD1Q9NUN5 540 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 COMMD8Q9NX08 183 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 DLGAP2Q9P1A6 1054 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 ARHGAP26Q9UNA1 814 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 PCDHB4Q9Y5E5 795 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 CPQQ9Y646 472 aa11.27□□□□□ -0.61
SHMT2-213ENST00000554600 EP300Q09472 2414 aaPredicted RBP11.27□□□□□ -0.61
SHMT2-213ENST00000554600 LEFTY2O00292 366 aa11.26□□□□□ -0.61
SHMT2-213ENST00000554600 TNFRSF10BO14763 440 aa11.26□□□□□ -0.61
SHMT2-213ENST00000554600 P4HA2O15460 535 aa11.26□□□□□ -0.61
SHMT2-213ENST00000554600 IRF1P10914 325 aa11.26□□□□□ -0.61
SHMT2-213ENST00000554600 MTIF2P46199 727 aaKnown RBP11.26□□□□□ -0.61
SHMT2-213ENST00000554600 SLC8A3P57103 927 aa11.26□□□□□ -0.61
SHMT2-213ENST00000554600 AMPD2Q01433 879 aa11.26□□□□□ -0.61
SHMT2-213ENST00000554600 NR1H3Q13133 447 aa11.26□□□□□ -0.61
SHMT2-213ENST00000554600 LRRC32Q14392 662 aa11.26□□□□□ -0.61
SHMT2-213ENST00000554600 GOLGA7BQ2TAP0 167 aa11.26□□□□□ -0.61
SHMT2-213ENST00000554600 SGO2Q562F6 1265 aa11.26□□□□□ -0.61
SHMT2-213ENST00000554600 C1orf228Q6PIY5 440 aa11.26□□□□□ -0.61
SHMT2-213ENST00000554600 TXNDC11Q6PKC3 985 aa11.26□□□□□ -0.61
SHMT2-213ENST00000554600 TMEM270Q6UE05 265 aa11.26□□□□□ -0.61
SHMT2-213ENST00000554600 CLEC17AQ6ZS10 378 aa11.26□□□□□ -0.61
SHMT2-213ENST00000554600 GPRIN1Q7Z2K8 1008 aa11.26□□□□□ -0.61
SHMT2-213ENST00000554600 TRIM59Q8IWR1 403 aa11.26□□□□□ -0.61
SHMT2-213ENST00000554600 RIN3Q8TB24 985 aa11.26□□□□□ -0.61
SHMT2-213ENST00000554600 OSCP1Q8WVF1 389 aa11.26□□□□□ -0.61
SHMT2-213ENST00000554600 FAM83CQ9BQN1 747 aa11.26□□□□□ -0.61
SHMT2-213ENST00000554600 RNF38Q9H0F5 515 aa11.26□□□□□ -0.61
SHMT2-213ENST00000554600 FAM124BQ9H5Z6 455 aaPredicted RBP11.26□□□□□ -0.61
SHMT2-213ENST00000554600 CCSER2Q9H7U1 834 aa11.26□□□□□ -0.61
SHMT2-213ENST00000554600 CSNK1G1Q9HCP0 422 aa11.26□□□□□ -0.61
SHMT2-213ENST00000554600 HPS4Q9NQG7 708 aa11.26□□□□□ -0.61
SHMT2-213ENST00000554600 TLR8Q9NR97 1041 aaKnown RBP11.26□□□□□ -0.61
SHMT2-213ENST00000554600 RBM12Q9NTZ6 932 aaKnown RBP11.26□□□□□ -0.61
SHMT2-213ENST00000554600 CFAP97Q9P2B7 532 aa11.26□□□□□ -0.61
SHMT2-213ENST00000554600 HESX1Q9UBX0 185 aa11.26□□□□□ -0.61
SHMT2-213ENST00000554600 DACH1Q9UI36 760 aa11.26□□□□□ -0.61
SHMT2-213ENST00000554600 SHISA7A6NL88 538 aa11.25□□□□□ -0.61
SHMT2-213ENST00000554600 CYP26A1O43174 497 aa11.25□□□□□ -0.61
SHMT2-213ENST00000554600 COCHO43405 550 aa11.25□□□□□ -0.61
SHMT2-213ENST00000554600 OAS1P00973 400 aaKnown RBP11.25□□□□□ -0.61
SHMT2-213ENST00000554600 RPS9P46781 194 aaKnown RBP11.25□□□□□ -0.61
SHMT2-213ENST00000554600 MLLT6P55198 1093 aaPredicted RBP11.25□□□□□ -0.61
SHMT2-213ENST00000554600 SLC7A9P82251 487 aa11.25□□□□□ -0.61
SHMT2-213ENST00000554600 CSTF1Q05048 431 aaKnown RBP11.25□□□□□ -0.61
SHMT2-213ENST00000554600 DPCR1Q3MIW9 517 aa11.25□□□□□ -0.61
SHMT2-213ENST00000554600 RRAGAQ7L523 313 aa11.25□□□□□ -0.61
SHMT2-213ENST00000554600 DDX42Q86XP3 938 aaKnown RBP eCLIP11.25□□□□□ -0.61
SHMT2-213ENST00000554600 EHBP1Q8NDI1 1231 aa11.25□□□□□ -0.61
SHMT2-213ENST00000554600 ATP2A3Q93084 1043 aa11.25□□□□□ -0.61
SHMT2-213ENST00000554600 CLDN23Q96B33 292 aa11.25□□□□□ -0.61
SHMT2-213ENST00000554600 INTS2Q9H0H0 1204 aaKnown RBP11.25□□□□□ -0.61
SHMT2-213ENST00000554600 LINC00597Q9H2U6 94 aa11.25□□□□□ -0.61
SHMT2-213ENST00000554600 IL37Q9NZH6 218 aa11.25□□□□□ -0.61
SHMT2-213ENST00000554600 SH3BP1Q9Y3L3 701 aa11.25□□□□□ -0.61
SHMT2-213ENST00000554600 EML5Q05BV3 1969 aa11.25□□□□□ -0.61
SHMT2-213ENST00000554600 A0A1W2PQH9 124 aa11.24□□□□□ -0.61
SHMT2-213ENST00000554600 OTOL1A6NHN0 477 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-213ENST00000554600 HHLA1C9JL84 531 aa11.24□□□□□ -0.61
SHMT2-213ENST00000554600 PES1O00541 588 aaKnown RBP11.24□□□□□ -0.61
SHMT2-213ENST00000554600 SLC9A3R1O14745 358 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-213ENST00000554600 PMM2O15305 246 aa11.24□□□□□ -0.61
SHMT2-213ENST00000554600 TLR5O60602 858 aa11.24□□□□□ -0.61
SHMT2-213ENST00000554600 NFATC1O95644 943 aa11.24□□□□□ -0.61
SHMT2-213ENST00000554600 KRT5P13647 590 aa11.24□□□□□ -0.61
SHMT2-213ENST00000554600 BCAT1P54687 386 aa11.24□□□□□ -0.61
SHMT2-213ENST00000554600 MARSP56192 900 aaKnown RBP11.24□□□□□ -0.61
SHMT2-213ENST00000554600 GRSF1Q12849 480 aaKnown RBP eCLIP11.24□□□□□ -0.61
SHMT2-213ENST00000554600 MTAPQ13126 283 aa11.24□□□□□ -0.61
SHMT2-213ENST00000554600 EML3Q32P44 896 aa11.24□□□□□ -0.61
SHMT2-213ENST00000554600 HSP90AA4PQ58FG1 418 aa11.24□□□□□ -0.61
SHMT2-213ENST00000554600 DGKKQ5KSL6 1271 aa11.24□□□□□ -0.61
SHMT2-213ENST00000554600 ARHGAP17Q68EM7 881 aa11.24□□□□□ -0.61
SHMT2-213ENST00000554600 ARHGEF19Q8IW93 802 aa11.24□□□□□ -0.61
SHMT2-213ENST00000554600 FAM114A1Q8IWE2 563 aa11.24□□□□□ -0.61
SHMT2-213ENST00000554600 KAT5Q92993 513 aa11.24□□□□□ -0.61
SHMT2-213ENST00000554600 EXOC4Q96A65 974 aa11.24□□□□□ -0.61
SHMT2-213ENST00000554600 CRACR2AQ9BSW2 395 aa11.24□□□□□ -0.61
SHMT2-213ENST00000554600 CHRDQ9H2X0 955 aa11.24□□□□□ -0.61
SHMT2-213ENST00000554600 ECT2Q9H8V3 914 aa11.24□□□□□ -0.61
SHMT2-213ENST00000554600 PNPLA8Q9NP80 782 aa11.24□□□□□ -0.61
SHMT2-213ENST00000554600 NAGPAQ9UK23 515 aa11.24□□□□□ -0.61
SHMT2-213ENST00000554600 TSPAN16Q9UKR8 245 aa11.24□□□□□ -0.61
SHMT2-213ENST00000554600 SCML2Q9UQR0 700 aa11.24□□□□□ -0.61
SHMT2-213ENST00000554600 R4GN57 208 aa11.24□□□□□ -0.61
SHMT2-213ENST00000554600 FAM92AA1XBS5 289 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 OLFM2O95897 454 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 TBX18O95935 607 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 ZDHHC11BP0C7U3 371 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 SP9P0CG40 484 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 CHRNB1P11230 501 aa11.23□□□□□ -0.61
SHMT2-213ENST00000554600 VDRP11473 427 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms