RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 CLCN4P51793 760 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 SLC12A3P55017 1021 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 ZXDAP98168 799 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 RPL6Q02878 288 aaKnown RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 UBE3AQ05086 875 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 PDAP1Q13442 181 aaKnown RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 SMAD1Q15797 465 aaKnown RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 UPP1Q16831 310 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 HS1BP3Q53T59 392 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 ZNF542PQ5EBM4 170 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 PPP6R3Q5H9R7 873 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 FKBP15Q5T1M5 1219 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 TBC1D3GQ6DHY5 549 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 TBC1D3CQ6IPX1 549 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 SV2AQ7L0J3 742 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 TBC1D3Q8IZP1 549 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 PDCL2Q8N4E4 241 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 ALLCQ8N6M5 410 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 IGSF22Q8N9C0 903 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 EDAQ92838 391 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 SMARCD2Q92925 531 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 CLP1Q92989 425 aaKnown RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 SYAP1Q96A49 352 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 PCED1BQ96HM7 432 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 SCYL1Q96KG9 808 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 RPRD1AQ96P16 312 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 PPP1R10Q96QC0 940 aaKnown RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 NT5C1AQ9BXI3 368 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 B3GNT5Q9BYG0 378 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 LMAN2LQ9H0V9 348 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 ABCG4Q9H172 646 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 MUC3BQ9H195 1237 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 CRISPLD1Q9H336 500 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 PRO3102Q9H379 93 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 FAM204AQ9H8W3 233 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 WDR6Q9NNW5 1121 aaKnown RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 INTS13Q9NVM9 706 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 CHMP5Q9NZZ3 219 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 ODF2LQ9ULJ1 636 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 ICE1Q9Y2F5 2266 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 INTS1Q8N201 2190 aaKnown RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 TRBV23OR9-2A0A075B6M9 112 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 SYCE3A1L190 88 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 PATE3B3GLJ2 98 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 EPB41L2O43491 1005 aaKnown RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 SDC3O75056 442 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 N4BP1O75113 896 aaKnown RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 KLF8O95600 359 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 ADRB2P07550 413 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 SLFN14P0C7P3 912 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 ZNF16P17020 682 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 ETFBP38117 255 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 ID4P47928 161 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 NOVA1P51513 510 aaKnown RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 TKTL1P51854 596 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 TPM4P67936 248 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 PLCB3Q01970 1234 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 DSG1Q02413 1049 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 ADIGQ0VDE8 80 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 MTAPQ13126 283 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 MTF1Q14872 753 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 MLF2Q15773 248 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 ITPRIPL2Q3MIP1 535 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 HECTD3Q5T447 861 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 EGFLAMQ63HQ2 1017 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 TXNDC11Q6PKC3 985 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 DNAJC14Q6Y2X3 702 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 UNC13DQ70J99 1090 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 DGLUCYQ7Z3D6 616 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 ZNF598Q86UK7 904 aaKnown RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 CIR1Q86X95 450 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 C1orf210Q8IVY1 113 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 HDDC3Q8N4P3 179 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 ZNF513Q8N8E2 541 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 SPC24Q8NBT2 197 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 B3GALNT2Q8NCR0 500 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 GSTCDQ8NEC7 633 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 SLC30A5Q8TAD4 765 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 CTNNBL1Q8WYA6 563 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 SUSD6Q92537 303 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 KCNB2Q92953 911 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 KAT5Q92993 513 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 TMA16Q96EY4 203 aaKnown RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 SNX27Q96L92 541 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 SPOCK3Q9BQ16 436 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 VN1R3Q9BXE9 311 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 SLC46A2Q9BY10 475 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 OSBPL6Q9BZF3 934 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 PLA2G2FQ9BZM2 168 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 TM6SF2Q9BZW4 377 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 ELAC1Q9H777 363 aaKnown RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 DYRK4Q9NR20 520 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 ABCF3Q9NUQ8 709 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 TMLHEQ9NVH6 421 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 AFF4Q9UHB7 1163 aaKnown RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 PCSK1NQ9UHG2 260 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 FBXO10Q9UK96 956 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 CPSF3Q9UKF6 684 aaKnown RBP2.64□□□□□ -1.99
PRPF39-205ENST00000554081 VPS9D1Q9Y2B5 631 aa2.64□□□□□ -1.99
PRPF39-205ENST00000554081 HECTD1Q9ULT8 2610 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms