RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 DDX56Q9NY93 547 aaKnown RBP2.94□□□□□ -1.94
SRP54-204ENST00000553923 XPR1Q9UBH6 696 aa2.94□□□□□ -1.94
SRP54-204ENST00000553923 FEZ2Q9UHY8 353 aaPredicted RBP2.94□□□□□ -1.94
SRP54-204ENST00000553923 AMFRQ9UKV5 643 aa2.94□□□□□ -1.94
SRP54-204ENST00000553923 PLEKHM1Q9Y4G2 1056 aa2.94□□□□□ -1.94
SRP54-204ENST00000553923 PCDHA1Q9Y5I3 950 aa2.94□□□□□ -1.94
SRP54-204ENST00000553923 SNX14Q9Y5W7 946 aa2.94□□□□□ -1.94
SRP54-204ENST00000553923 T-ENOLP0DO92 83 aa2.93□□□□□ -1.94
SRP54-204ENST00000553923 MYBL2P10244 700 aa2.93□□□□□ -1.94
SRP54-204ENST00000553923 PLA2G2AP14555 144 aa2.93□□□□□ -1.94
SRP54-204ENST00000553923 LRPAP1P30533 357 aa2.93□□□□□ -1.94
SRP54-204ENST00000553923 GKP32189 559 aa2.93□□□□□ -1.94
SRP54-204ENST00000553923 DGKEP52429 567 aa2.93□□□□□ -1.94
SRP54-204ENST00000553923 MAP2K6P52564 334 aa2.93□□□□□ -1.94
SRP54-204ENST00000553923 RPS13P62277 151 aaKnown RBP2.93□□□□□ -1.94
SRP54-204ENST00000553923 ZXDBP98169 803 aa2.93□□□□□ -1.94
SRP54-204ENST00000553923 LMAN2Q12907 356 aa2.93□□□□□ -1.94
SRP54-204ENST00000553923 LARS2Q15031 903 aaKnown RBP2.93□□□□□ -1.94
SRP54-204ENST00000553923 ABCB5Q2M3G0 1257 aa2.93□□□□□ -1.94
SRP54-204ENST00000553923 C4orf46Q504U0 113 aa2.93□□□□□ -1.94
SRP54-204ENST00000553923 THEMIS2Q5TEJ8 643 aa2.93□□□□□ -1.94
SRP54-204ENST00000553923 SYDE2Q5VT97 1194 aa2.93□□□□□ -1.94
SRP54-204ENST00000553923 DAB2IPQ5VWQ8 1189 aa2.93□□□□□ -1.94
SRP54-204ENST00000553923 ATG9BQ674R7 924 aa2.93□□□□□ -1.94
SRP54-204ENST00000553923 NECAB2Q7Z6G3 386 aa2.93□□□□□ -1.94
SRP54-204ENST00000553923 DDX42Q86XP3 938 aaKnown RBP eCLIP2.93□□□□□ -1.94
SRP54-204ENST00000553923 ANKRD13BQ86YJ7 626 aa2.93□□□□□ -1.94
SRP54-204ENST00000553923 RFX6Q8HWS3 928 aa2.93□□□□□ -1.94
SRP54-204ENST00000553923 CCDC146Q8IYE0 955 aa2.93□□□□□ -1.94
SRP54-204ENST00000553923 MMP21Q8N119 569 aa2.93□□□□□ -1.94
SRP54-204ENST00000553923 SIRT6Q8N6T7 355 aa2.93□□□□□ -1.94
SRP54-204ENST00000553923 MPLKIPQ8TAP9 179 aa2.93□□□□□ -1.94
SRP54-204ENST00000553923 ZPBPQ9BS86 351 aa2.93□□□□□ -1.94
SRP54-204ENST00000553923 DPCDQ9BVM2 203 aaPredicted RBP2.93□□□□□ -1.94
SRP54-204ENST00000553923 BRINP2Q9C0B6 783 aa2.93□□□□□ -1.94
SRP54-204ENST00000553923 TRMT13Q9NUP7 481 aaKnown RBP2.93□□□□□ -1.94
SRP54-204ENST00000553923 PNPOQ9NVS9 261 aa2.93□□□□□ -1.94
SRP54-204ENST00000553923 SHOC2Q9UQ13 582 aa2.93□□□□□ -1.94
SRP54-204ENST00000553923 CCDC194A0A1B0GVG4 234 aa2.92□□□□□ -1.94
SRP54-204ENST00000553923 GABRDO14764 452 aa2.92□□□□□ -1.94
SRP54-204ENST00000553923 PMPCBO75439 489 aa2.92□□□□□ -1.94
SRP54-204ENST00000553923 PDCP20941 246 aa2.92□□□□□ -1.94
SRP54-204ENST00000553923 KCNA3P22001 575 aa2.92□□□□□ -1.94
SRP54-204ENST00000553923 SOX8P57073 446 aa2.92□□□□□ -1.94
SRP54-204ENST00000553923 ODR4Q5SWX8 454 aa2.92□□□□□ -1.94
SRP54-204ENST00000553923 ANO7Q6IWH7 933 aa2.92□□□□□ -1.94
SRP54-204ENST00000553923 TMED8Q6PL24 325 aaPredicted RBP2.92□□□□□ -1.94
SRP54-204ENST00000553923 WDR75Q8IWA0 830 aaKnown RBP2.92□□□□□ -1.94
SRP54-204ENST00000553923 CCAR1Q8IX12 1150 aaKnown RBP2.92□□□□□ -1.94
SRP54-204ENST00000553923 ZNF479Q96JC4 524 aa2.92□□□□□ -1.94
SRP54-204ENST00000553923 FAM84BQ96KN1 310 aaPredicted RBP2.92□□□□□ -1.94
SRP54-204ENST00000553923 FAM167AQ96KS9 214 aa2.92□□□□□ -1.94
SRP54-204ENST00000553923 MOGAT1Q96PD6 335 aa2.92□□□□□ -1.94
SRP54-204ENST00000553923 TMEM8AQ9HCN3 771 aa2.92□□□□□ -1.94
SRP54-204ENST00000553923 SEMA4BQ9NPR2 832 aaPredicted RBP2.92□□□□□ -1.94
SRP54-204ENST00000553923 LMBRD1Q9NUN5 540 aa2.92□□□□□ -1.94
SRP54-204ENST00000553923 TXLNGQ9NUQ3 528 aa2.92□□□□□ -1.94
SRP54-204ENST00000553923 LPAR3Q9UBY5 353 aa2.92□□□□□ -1.94
SRP54-204ENST00000553923 TRHDEQ9UKU6 1024 aa2.92□□□□□ -1.94
SRP54-204ENST00000553923 MRFAP1Q9Y605 127 aa2.92□□□□□ -1.94
SRP54-204ENST00000553923 SHTN1A0MZ66 631 aa2.91□□□□□ -1.94
SRP54-204ENST00000553923 GAS8-AS1O95177 125 aa2.91□□□□□ -1.94
SRP54-204ENST00000553923 FTLP02792 175 aaPredicted RBP2.91□□□□□ -1.94
SRP54-204ENST00000553923 GRPP07492 148 aa2.91□□□□□ -1.94
SRP54-204ENST00000553923 PDGFRBP09619 1106 aa2.91□□□□□ -1.94
SRP54-204ENST00000553923 DIO1P49895 249 aa2.91□□□□□ -1.94
SRP54-204ENST00000553923 EVA1CP58658 441 aa2.91□□□□□ -1.94
SRP54-204ENST00000553923 AMPD3Q01432 767 aa2.91□□□□□ -1.94
SRP54-204ENST00000553923 PLS1Q14651 629 aa2.91□□□□□ -1.94
SRP54-204ENST00000553923 EFCAB2Q5VUJ9 269 aa2.91□□□□□ -1.94
SRP54-204ENST00000553923 RANBP10Q6VN20 620 aa2.91□□□□□ -1.94
SRP54-204ENST00000553923 CELF5Q8N6W0 485 aaKnown RBP2.91□□□□□ -1.94
SRP54-204ENST00000553923 PCSK9Q8NBP7 692 aaKnown RBP2.91□□□□□ -1.94
SRP54-204ENST00000553923 KAZALD1Q96I82 304 aa2.91□□□□□ -1.94
SRP54-204ENST00000553923 TCEAL9Q9UHQ7 104 aa2.91□□□□□ -1.94
SRP54-204ENST00000553923 ATP8A1Q9Y2Q0 1164 aa2.91□□□□□ -1.94
SRP54-204ENST00000553923 IGLV5-39A0A0G2JS06 123 aa2.9□□□□□ -1.95
SRP54-204ENST00000553923 PRC1O43663 620 aa2.9□□□□□ -1.95
SRP54-204ENST00000553923 RNF8O76064 485 aa2.9□□□□□ -1.95
SRP54-204ENST00000553923 CYP2C9P11712 490 aa2.9□□□□□ -1.95
SRP54-204ENST00000553923 PHKG2P15735 406 aa2.9□□□□□ -1.95
SRP54-204ENST00000553923 TNFRSF8P28908 595 aa2.9□□□□□ -1.95
SRP54-204ENST00000553923 COPB1P53618 953 aaKnown RBP2.9□□□□□ -1.95
SRP54-204ENST00000553923 UCP3P55916 312 aa2.9□□□□□ -1.95
SRP54-204ENST00000553923 WNT3P56703 355 aa2.9□□□□□ -1.95
SRP54-204ENST00000553923 IRX6P78412 446 aaPredicted RBP2.9□□□□□ -1.95
SRP54-204ENST00000553923 MTMR1Q13613 665 aa2.9□□□□□ -1.95
SRP54-204ENST00000553923 FAM50AQ14320 339 aaKnown RBP2.9□□□□□ -1.95
SRP54-204ENST00000553923 INPP5JQ15735 1006 aaPredicted RBP2.9□□□□□ -1.95
SRP54-204ENST00000553923 GSG1LQ6UXU4 331 aa2.9□□□□□ -1.95
SRP54-204ENST00000553923 PTCHD4Q6ZW05 846 aa2.9□□□□□ -1.95
SRP54-204ENST00000553923 PNMA8AQ86V59 439 aaPredicted RBP2.9□□□□□ -1.95
SRP54-204ENST00000553923 GAS2L3Q86XJ1 694 aa2.9□□□□□ -1.95
SRP54-204ENST00000553923 TICAM2Q86XR7 235 aa2.9□□□□□ -1.95
SRP54-204ENST00000553923 STAG1Q8WVM7 1258 aa2.9□□□□□ -1.95
SRP54-204ENST00000553923 PMM1Q92871 262 aa2.9□□□□□ -1.95
SRP54-204ENST00000553923 MTMR8Q96EF0 704 aa2.9□□□□□ -1.95
SRP54-204ENST00000553923 C17orf80Q9BSJ5 609 aa2.9□□□□□ -1.95
SRP54-204ENST00000553923 SLC13A1Q9BZW2 595 aa2.9□□□□□ -1.95
SRP54-204ENST00000553923 CCDC8Q9H0W5 538 aaPredicted RBP2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms