RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 DMAP1Q9NPF5 467 aaPredicted RBP8.84□□□□□ -0.99
PSEN1-209ENST00000553855 CRTAC1Q9NQ79 661 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 CISHQ9NSE2 258 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 THG1LQ9NWX6 298 aaKnown RBP8.84□□□□□ -0.99
PSEN1-209ENST00000553855 TRPM5Q9NZQ8 1165 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 HESX1Q9UBX0 185 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 COQ4Q9Y3A0 265 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 NUMBLQ9Y6R0 609 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 EYSQ5T1H1 3165 aa8.84□□□□□ -0.99
PSEN1-209ENST00000553855 TMEM221A6NGB7 291 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 SOBPA7XYQ1 873 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 PRR33A8MZF0 331 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 ANHXE9PGG2 379 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 F8VP50 259 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 M0R296 226 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 PMM2O15305 246 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 HCRTO43612 131 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 CILPO75339 1184 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 ECI2O75521 394 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 NOL4O94818 638 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 SRFP11831 508 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 CD19P15391 556 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 GJA1P17302 382 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 CDK11BP21127 795 aaKnown RBP8.83□□□□□ -1
PSEN1-209ENST00000553855 VAMP1P23763 118 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 MPSTP25325 297 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 ADORA2BP29275 332 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 GPR15P49685 360 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 INCA1Q0VD86 236 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 IFRD2Q12894 506 aaPredicted RBP8.83□□□□□ -1
PSEN1-209ENST00000553855 FOXC1Q12948 553 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 HTR4Q13639 388 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 LAPTM4AQ15012 233 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 SLC5A9Q2M3M2 681 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 SDHAF4Q5VUM1 108 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 PARM1Q6UWI2 310 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 GBP6Q6ZN66 633 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 FAM35AQ86V20 835 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 TMC8Q8IU68 726 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 NUP93Q8N1F7 819 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 STKLD1Q8NE28 680 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 PDZD8Q8NEN9 1154 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 SHKBP1Q8TBC3 707 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 FEZF2Q8TBJ5 459 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 SLC2A14Q8TDB8 520 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 DEPDC1BQ8WUY9 529 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 SEMA4DQ92854 862 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 ELSPBP1Q96BH3 223 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 ELMO3Q96BJ8 720 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 TCEAL4Q96EI5 215 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 CYFIP2Q96F07 1278 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 TRMT2BQ96GJ1 504 aaKnown RBP8.83□□□□□ -1
PSEN1-209ENST00000553855 TMEM176AQ96HP8 235 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 SHDQ96IW2 340 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 PKMYT1Q99640 499 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 B3GNT5Q9BYG0 378 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 RBCK1Q9BYM8 510 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 ZNF518BQ9C0D4 1074 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 SDCBP2Q9H190 292 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 TASP1Q9H6P5 420 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 BRD9Q9H8M2 597 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 APOBEC3GQ9HC16 384 aaKnown RBP8.83□□□□□ -1
PSEN1-209ENST00000553855 TRPC7Q9HCX4 862 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 FAM49BQ9NUQ9 324 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 COMMD8Q9NX08 183 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 SCHIP1Q9P0W5 487 aaPredicted RBP8.83□□□□□ -1
PSEN1-209ENST00000553855 KIAA1257Q9ULG3 409 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 DUSP12Q9UNI6 340 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 PCDHB4Q9Y5E5 795 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 MTCL1Q9Y4B5 1905 aaKnown RBP8.83□□□□□ -1
PSEN1-209ENST00000553855 PRUNE2Q8WUY3 3088 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 SCN1AP35498 2009 aa8.83□□□□□ -1
PSEN1-209ENST00000553855 TRAV19A0A0A6YYK7 116 aa8.82□□□□□ -1
PSEN1-209ENST00000553855 A6NJY4 79 aa8.82□□□□□ -1
PSEN1-209ENST00000553855 CLDN5O00501 218 aa8.82□□□□□ -1
PSEN1-209ENST00000553855 ZNF263O14978 683 aa8.82□□□□□ -1
PSEN1-209ENST00000553855 CKMP06732 381 aa8.82□□□□□ -1
PSEN1-209ENST00000553855 EEF1GP26641 437 aaKnown RBP8.82□□□□□ -1
PSEN1-209ENST00000553855 YWHAQP27348 245 aa8.82□□□□□ -1
PSEN1-209ENST00000553855 CCR2P41597 374 aa8.82□□□□□ -1
PSEN1-209ENST00000553855 MFAP3P55082 362 aa8.82□□□□□ -1
PSEN1-209ENST00000553855 TPM4P67936 248 aa8.82□□□□□ -1
PSEN1-209ENST00000553855 CYP4F8P98187 520 aa8.82□□□□□ -1
PSEN1-209ENST00000553855 ORC1Q13415 861 aa8.82□□□□□ -1
PSEN1-209ENST00000553855 MAN2A1Q16706 1144 aa8.82□□□□□ -1
PSEN1-209ENST00000553855 EXOC3L4Q17RC7 722 aa8.82□□□□□ -1
PSEN1-209ENST00000553855 SKOR2Q2VWA4 1001 aaPredicted RBP8.82□□□□□ -1
PSEN1-209ENST00000553855 SGO2Q562F6 1265 aa8.82□□□□□ -1
PSEN1-209ENST00000553855 FAM78AQ5JUQ0 283 aa8.82□□□□□ -1
PSEN1-209ENST00000553855 CAVIN1Q6NZI2 390 aaKnown RBP8.82□□□□□ -1
PSEN1-209ENST00000553855 CC2D1AQ6P1N0 951 aaPredicted RBP8.82□□□□□ -1
PSEN1-209ENST00000553855 ENOSF1Q7L5Y1 443 aa8.82□□□□□ -1
PSEN1-209ENST00000553855 ENOX1Q8TC92 643 aaKnown RBP8.82□□□□□ -1
PSEN1-209ENST00000553855 CSGALNACT1Q8TDX6 532 aa8.82□□□□□ -1
PSEN1-209ENST00000553855 RSAD2Q8WXG1 361 aa8.82□□□□□ -1
PSEN1-209ENST00000553855 FGF14Q92915 247 aa8.82□□□□□ -1
PSEN1-209ENST00000553855 IRF7Q92985 503 aa8.82□□□□□ -1
PSEN1-209ENST00000553855 FBXO32Q969P5 355 aa8.82□□□□□ -1
PSEN1-209ENST00000553855 HNRNPABQ99729 332 aaKnown RBP8.82□□□□□ -1
PSEN1-209ENST00000553855 KXD1Q9BQD3 176 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms