RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 ZBED1O96006 694 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 ATP1A1P05023 1023 aaKnown RBP12.34□□□□□ -0.43
NEK9-202ENST00000553823 GLI1P08151 1106 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 ATF2P15336 505 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 MAN1A1P33908 653 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 BMP8BP34820 402 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 CA8P35219 290 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 SLC1A1P43005 524 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 DAOAP59103 153 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 RNASE9P60153 205 aaKnown RBP12.34□□□□□ -0.43
NEK9-202ENST00000553823 ERVK-21P61565 698 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 RPL10AP62906 217 aaKnown RBP12.34□□□□□ -0.43
NEK9-202ENST00000553823 MRPS5P82675 430 aaKnown RBP12.34□□□□□ -0.43
NEK9-202ENST00000553823 PIGHQ14442 188 aaPredicted RBP12.34□□□□□ -0.43
NEK9-202ENST00000553823 RAB30Q15771 203 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 DDR2Q16832 855 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 MEI1Q5TIA1 1274 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 ARCQ7LC44 396 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 SPRED2Q7Z698 418 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 NT5DC3Q86UY8 548 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 NUP93Q8N1F7 819 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 SCML4Q8N228 414 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 EMC1Q8N766 993 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.34□□□□□ -0.43
NEK9-202ENST00000553823 POF1BQ8WVV4 589 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 KHSRPQ92945 711 aaKnown RBP eCLIP12.34□□□□□ -0.43
NEK9-202ENST00000553823 SEPT5Q99719 369 aaPredicted RBP12.34□□□□□ -0.43
NEK9-202ENST00000553823 TCF25Q9BQ70 676 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 TLR10Q9BXR5 811 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 CRISPLD1Q9H336 500 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 ENTPD7Q9NQZ7 604 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 TLR9Q9NR96 1032 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 ASNSD1Q9NWL6 643 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 HSFX1Q9UBD0 423 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 MSRAQ9UJ68 235 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 MTUS1Q9ULD2 1270 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 MAFFQ9ULX9 164 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 IRAK3Q9Y616 596 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 USP3Q9Y6I4 520 aa12.34□□□□□ -0.43
NEK9-202ENST00000553823 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.33□□□□□ -0.44
NEK9-202ENST00000553823 C2CD4BA6NLJ0 364 aa12.33□□□□□ -0.44
NEK9-202ENST00000553823 NCK2O43639 380 aa12.33□□□□□ -0.44
NEK9-202ENST00000553823 SPOPO43791 374 aa12.33□□□□□ -0.44
NEK9-202ENST00000553823 GRAP2O75791 330 aa12.33□□□□□ -0.44
NEK9-202ENST00000553823 CNPP09543 421 aaKnown RBP12.33□□□□□ -0.44
NEK9-202ENST00000553823 USP17L7P0C7H9 530 aa12.33□□□□□ -0.44
NEK9-202ENST00000553823 GPD1P21695 349 aa12.33□□□□□ -0.44
NEK9-202ENST00000553823 COMTP21964 271 aa12.33□□□□□ -0.44
NEK9-202ENST00000553823 PSMA2P25787 234 aa12.33□□□□□ -0.44
NEK9-202ENST00000553823 FLT3P36888 993 aa12.33□□□□□ -0.44
NEK9-202ENST00000553823 PBX2P40425 430 aa12.33□□□□□ -0.44
NEK9-202ENST00000553823 TUFMP49411 452 aaKnown RBP12.33□□□□□ -0.44
NEK9-202ENST00000553823 GPR15P49685 360 aa12.33□□□□□ -0.44
NEK9-202ENST00000553823 SLC5A3P53794 718 aa12.33□□□□□ -0.44
NEK9-202ENST00000553823 ERVFC1P60507 584 aa12.33□□□□□ -0.44
NEK9-202ENST00000553823 OGDHQ02218 1023 aa12.33□□□□□ -0.44
NEK9-202ENST00000553823 ZNF252P-AS1Q0IIN9 211 aa12.33□□□□□ -0.44
NEK9-202ENST00000553823 SMC1AQ14683 1233 aaKnown RBP12.33□□□□□ -0.44
NEK9-202ENST00000553823 RPS6KA1Q15418 735 aa12.33□□□□□ -0.44
NEK9-202ENST00000553823 TAF5Q15542 800 aa12.33□□□□□ -0.44
NEK9-202ENST00000553823 PTPROQ16827 1216 aa12.33□□□□□ -0.44
NEK9-202ENST00000553823 SDHAF4Q5VUM1 108 aa12.33□□□□□ -0.44
NEK9-202ENST00000553823 PAPD7Q5XG87 772 aaKnown RBP12.33□□□□□ -0.44
NEK9-202ENST00000553823 PM20D1Q6GTS8 502 aa12.33□□□□□ -0.44
NEK9-202ENST00000553823 NIPA2Q8N8Q9 360 aa12.33□□□□□ -0.44
NEK9-202ENST00000553823 SCAMP5Q8TAC9 235 aa12.33□□□□□ -0.44
NEK9-202ENST00000553823 RXFP2Q8WXD0 754 aa12.33□□□□□ -0.44
NEK9-202ENST00000553823 IRGQQ8WZA9 623 aa12.33□□□□□ -0.44
NEK9-202ENST00000553823 NDRG1Q92597 394 aaKnown RBP12.33□□□□□ -0.44
NEK9-202ENST00000553823 FAM149B1Q96BN6 582 aa12.33□□□□□ -0.44
NEK9-202ENST00000553823 SPATA17Q96L03 361 aa12.33□□□□□ -0.44
NEK9-202ENST00000553823 CEP295NLQ96MC4 621 aa12.33□□□□□ -0.44
NEK9-202ENST00000553823 PBX4Q9BYU1 374 aa12.33□□□□□ -0.44
NEK9-202ENST00000553823 NGRNQ9NPE2 291 aaKnown RBP12.33□□□□□ -0.44
NEK9-202ENST00000553823 HYOU1Q9Y4L1 999 aa12.33□□□□□ -0.44
NEK9-202ENST00000553823 PLXNA3P51805 1871 aa12.33□□□□□ -0.44
NEK9-202ENST00000553823 MIF4GDA9UHW6 222 aaKnown RBP12.32□□□□□ -0.44
NEK9-202ENST00000553823 DPYSL4O14531 572 aa12.32□□□□□ -0.44
NEK9-202ENST00000553823 GRM6O15303 877 aa12.32□□□□□ -0.44
NEK9-202ENST00000553823 LPXNO60711 386 aa12.32□□□□□ -0.44
NEK9-202ENST00000553823 DAB1O75553 588 aa12.32□□□□□ -0.44
NEK9-202ENST00000553823 SOAT2O75908 522 aa12.32□□□□□ -0.44
NEK9-202ENST00000553823 URI1O94763 535 aaPredicted RBP12.32□□□□□ -0.44
NEK9-202ENST00000553823 RTN3O95197 1032 aaPredicted RBP12.32□□□□□ -0.44
NEK9-202ENST00000553823 SEC24AO95486 1093 aa12.32□□□□□ -0.44
NEK9-202ENST00000553823 ADH1AP07327 375 aa12.32□□□□□ -0.44
NEK9-202ENST00000553823 PDGFRAP16234 1089 aa12.32□□□□□ -0.44
NEK9-202ENST00000553823 DNAJB1P25685 340 aa12.32□□□□□ -0.44
NEK9-202ENST00000553823 ELF1P32519 619 aa12.32□□□□□ -0.44
NEK9-202ENST00000553823 ZNF143P52747 638 aaPredicted RBP12.32□□□□□ -0.44
NEK9-202ENST00000553823 YWHAZP63104 245 aaKnown RBP12.32□□□□□ -0.44
NEK9-202ENST00000553823 IFRD2Q12894 506 aaPredicted RBP12.32□□□□□ -0.44
NEK9-202ENST00000553823 GPM6BQ13491 265 aa12.32□□□□□ -0.44
NEK9-202ENST00000553823 ACAP1Q15027 740 aa12.32□□□□□ -0.44
NEK9-202ENST00000553823 PLPP4Q5VZY2 271 aa12.32□□□□□ -0.44
NEK9-202ENST00000553823 TRNP1Q6NT89 227 aa12.32□□□□□ -0.44
NEK9-202ENST00000553823 DENND5BQ6ZUT9 1274 aa12.32□□□□□ -0.44
NEK9-202ENST00000553823 CPNE8Q86YQ8 564 aa12.32□□□□□ -0.44
NEK9-202ENST00000553823 MRPL43Q8N983 215 aaKnown RBP12.32□□□□□ -0.44
NEK9-202ENST00000553823 HES6Q96HZ4 224 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms