RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 MAGEA9P43362 315 aa10.79□□□□□ -0.68
HNRNPC-208ENST00000553753 RPS9P46781 194 aaKnown RBP10.79□□□□□ -0.68
HNRNPC-208ENST00000553753 RUNX3Q13761 415 aa10.79□□□□□ -0.68
HNRNPC-208ENST00000553753 PDGFRLQ15198 375 aa10.79□□□□□ -0.68
HNRNPC-208ENST00000553753 DPCR1Q3MIW9 517 aa10.79□□□□□ -0.68
HNRNPC-208ENST00000553753 HECTD3Q5T447 861 aa10.79□□□□□ -0.68
HNRNPC-208ENST00000553753 PPM1KQ8N3J5 372 aa10.79□□□□□ -0.68
HNRNPC-208ENST00000553753 EHBP1Q8NDI1 1231 aa10.79□□□□□ -0.68
HNRNPC-208ENST00000553753 OSCP1Q8WVF1 389 aa10.79□□□□□ -0.68
HNRNPC-208ENST00000553753 HPS4Q9NQG7 708 aa10.79□□□□□ -0.68
HNRNPC-208ENST00000553753 DUS2Q9NX74 493 aaKnown RBP10.79□□□□□ -0.68
HNRNPC-208ENST00000553753 OTOL1A6NHN0 477 aaPredicted RBP10.78□□□□□ -0.68
HNRNPC-208ENST00000553753 LEFTY2O00292 366 aa10.78□□□□□ -0.68
HNRNPC-208ENST00000553753 ZDHHC11BP0C7U3 371 aa10.78□□□□□ -0.68
HNRNPC-208ENST00000553753 TUBP50607 506 aa10.78□□□□□ -0.68
HNRNPC-208ENST00000553753 USP4Q13107 963 aa10.78□□□□□ -0.68
HNRNPC-208ENST00000553753 TPD52L1Q16890 204 aaPredicted RBP10.78□□□□□ -0.68
HNRNPC-208ENST00000553753 ARHGAP17Q68EM7 881 aa10.78□□□□□ -0.68
HNRNPC-208ENST00000553753 TXNDC11Q6PKC3 985 aa10.78□□□□□ -0.68
HNRNPC-208ENST00000553753 GPRIN1Q7Z2K8 1008 aa10.78□□□□□ -0.68
HNRNPC-208ENST00000553753 ANKRD52Q8NB46 1076 aa10.78□□□□□ -0.68
HNRNPC-208ENST00000553753 GPT2Q8TD30 523 aa10.78□□□□□ -0.68
HNRNPC-208ENST00000553753 JAKMIP2Q96AA8 810 aa10.78□□□□□ -0.68
HNRNPC-208ENST00000553753 CNOT6LQ96LI5 555 aaKnown RBP10.78□□□□□ -0.68
HNRNPC-208ENST00000553753 LMAN1LQ9HAT1 526 aa10.78□□□□□ -0.68
HNRNPC-208ENST00000553753 TLR8Q9NR97 1041 aaKnown RBP10.78□□□□□ -0.68
HNRNPC-208ENST00000553753 GMIPQ9P107 970 aa10.78□□□□□ -0.68
HNRNPC-208ENST00000553753 DACH1Q9UI36 760 aa10.78□□□□□ -0.68
HNRNPC-208ENST00000553753 SCML2Q9UQR0 700 aa10.78□□□□□ -0.68
HNRNPC-208ENST00000553753 CPQQ9Y646 472 aa10.78□□□□□ -0.68
HNRNPC-208ENST00000553753 FRYLO94915 3013 aa10.78□□□□□ -0.68
HNRNPC-208ENST00000553753 COCHO43405 550 aa10.77□□□□□ -0.68
HNRNPC-208ENST00000553753 MBL2P11226 248 aaPredicted RBP10.77□□□□□ -0.68
HNRNPC-208ENST00000553753 CHRNB1P11230 501 aa10.77□□□□□ -0.68
HNRNPC-208ENST00000553753 ARSAP15289 507 aa10.77□□□□□ -0.68
HNRNPC-208ENST00000553753 ERCC5P28715 1186 aaPredicted RBP10.77□□□□□ -0.68
HNRNPC-208ENST00000553753 IFNAR2P48551 515 aa10.77□□□□□ -0.68
HNRNPC-208ENST00000553753 KIF11P52732 1056 aa10.77□□□□□ -0.68
HNRNPC-208ENST00000553753 SLC8A3P57103 927 aa10.77□□□□□ -0.68
HNRNPC-208ENST00000553753 AMPD2Q01433 879 aa10.77□□□□□ -0.68
HNRNPC-208ENST00000553753 GCNT1Q02742 428 aa10.77□□□□□ -0.68
HNRNPC-208ENST00000553753 SGO2Q562F6 1265 aa10.77□□□□□ -0.68
HNRNPC-208ENST00000553753 TMEM270Q6UE05 265 aa10.77□□□□□ -0.68
HNRNPC-208ENST00000553753 RRAGAQ7L523 313 aa10.77□□□□□ -0.68
HNRNPC-208ENST00000553753 IRF2BP1Q8IU81 584 aa10.77□□□□□ -0.68
HNRNPC-208ENST00000553753 UBR7Q8N806 425 aa10.77□□□□□ -0.68
HNRNPC-208ENST00000553753 ATP2A3Q93084 1043 aa10.77□□□□□ -0.68
HNRNPC-208ENST00000553753 UBXN6Q9BZV1 441 aa10.77□□□□□ -0.68
HNRNPC-208ENST00000553753 LINC00597Q9H2U6 94 aa10.77□□□□□ -0.68
HNRNPC-208ENST00000553753 CCSER2Q9H7U1 834 aa10.77□□□□□ -0.68
HNRNPC-208ENST00000553753 ECT2Q9H8V3 914 aa10.77□□□□□ -0.68
HNRNPC-208ENST00000553753 FAM86C1Q9NVL1 165 aa10.77□□□□□ -0.68
HNRNPC-208ENST00000553753 SPATA6Q9NWH7 488 aaPredicted RBP10.77□□□□□ -0.68
HNRNPC-208ENST00000553753 SMPD4Q9NXE4 827 aa10.77□□□□□ -0.68
HNRNPC-208ENST00000553753 KIAA1257Q9ULG3 409 aa10.77□□□□□ -0.68
HNRNPC-208ENST00000553753 WNT6Q9Y6F9 365 aa10.77□□□□□ -0.68
HNRNPC-208ENST00000553753 KIF26AQ9ULI4 1882 aaPredicted RBP10.77□□□□□ -0.69
HNRNPC-208ENST00000553753 ZFHX2Q9C0A1 2572 aaPredicted RBP10.77□□□□□ -0.69
HNRNPC-208ENST00000553753 TLR5O60602 858 aa10.77□□□□□ -0.69
HNRNPC-208ENST00000553753 CD19P15391 556 aa10.77□□□□□ -0.69
HNRNPC-208ENST00000553753 PGFP49763 221 aa10.77□□□□□ -0.69
HNRNPC-208ENST00000553753 PON2Q15165 354 aa10.77□□□□□ -0.69
HNRNPC-208ENST00000553753 EML3Q32P44 896 aa10.77□□□□□ -0.69
HNRNPC-208ENST00000553753 KIAA1958Q8N8K9 716 aa10.77□□□□□ -0.69
HNRNPC-208ENST00000553753 KAT5Q92993 513 aa10.77□□□□□ -0.69
HNRNPC-208ENST00000553753 PHOX2BQ99453 314 aa10.77□□□□□ -0.69
HNRNPC-208ENST00000553753 NACA2Q9H009 215 aa10.77□□□□□ -0.69
HNRNPC-208ENST00000553753 THAP9Q9H5L6 903 aa10.77□□□□□ -0.69
HNRNPC-208ENST00000553753 TSPAN16Q9UKR8 245 aa10.77□□□□□ -0.69
HNRNPC-208ENST00000553753 PCDHB4Q9Y5E5 795 aa10.77□□□□□ -0.69
HNRNPC-208ENST00000553753 USP3Q9Y6I4 520 aa10.77□□□□□ -0.69
HNRNPC-208ENST00000553753 CYP26A1O43174 497 aa10.76□□□□□ -0.69
HNRNPC-208ENST00000553753 LAMTOR5O43504 91 aa10.76□□□□□ -0.69
HNRNPC-208ENST00000553753 PAEPP09466 180 aa10.76□□□□□ -0.69
HNRNPC-208ENST00000553753 VDRP11473 427 aa10.76□□□□□ -0.69
HNRNPC-208ENST00000553753 GJA4P35212 333 aa10.76□□□□□ -0.69
HNRNPC-208ENST00000553753 MTIF2P46199 727 aaKnown RBP10.76□□□□□ -0.69
HNRNPC-208ENST00000553753 MTAPQ13126 283 aa10.76□□□□□ -0.69
HNRNPC-208ENST00000553753 NR1H3Q13133 447 aa10.76□□□□□ -0.69
HNRNPC-208ENST00000553753 CT47A1Q5JQC4 288 aaPredicted RBP10.76□□□□□ -0.69
HNRNPC-208ENST00000553753 CCDC186Q7Z3E2 898 aa10.76□□□□□ -0.69
HNRNPC-208ENST00000553753 PIGZQ86VD9 579 aa10.76□□□□□ -0.69
HNRNPC-208ENST00000553753 TTC30AQ86WT1 665 aa10.76□□□□□ -0.69
HNRNPC-208ENST00000553753 DDX42Q86XP3 938 aaKnown RBP eCLIP10.76□□□□□ -0.69
HNRNPC-208ENST00000553753 ARHGEF19Q8IW93 802 aa10.76□□□□□ -0.69
HNRNPC-208ENST00000553753 MAML2Q8IZL2 1156 aaPredicted RBP10.76□□□□□ -0.69
HNRNPC-208ENST00000553753 ADGRG2Q8IZP9 1017 aa10.76□□□□□ -0.69
HNRNPC-208ENST00000553753 CPA6Q8N4T0 437 aa10.76□□□□□ -0.69
HNRNPC-208ENST00000553753 CHFRQ96EP1 664 aa10.76□□□□□ -0.69
HNRNPC-208ENST00000553753 INTS2Q9H0H0 1204 aaKnown RBP10.76□□□□□ -0.69
HNRNPC-208ENST00000553753 CHRDQ9H2X0 955 aa10.76□□□□□ -0.69
HNRNPC-208ENST00000553753 CYLDQ9NQC7 956 aa10.76□□□□□ -0.69
HNRNPC-208ENST00000553753 OSER1Q9NX31 292 aa10.76□□□□□ -0.69
HNRNPC-208ENST00000553753 CFAP97Q9P2B7 532 aa10.76□□□□□ -0.69
HNRNPC-208ENST00000553753 HESX1Q9UBX0 185 aa10.76□□□□□ -0.69
HNRNPC-208ENST00000553753 PATJQ8NI35 1801 aa10.76□□□□□ -0.69
HNRNPC-208ENST00000553753 HELZP42694 1942 aaKnown RBP10.76□□□□□ -0.69
HNRNPC-208ENST00000553753 CFAP54Q96N23 3096 aa10.75□□□□□ -0.69
HNRNPC-208ENST00000553753 RNF225M0QZC1 329 aaPredicted RBP10.75□□□□□ -0.69
HNRNPC-208ENST00000553753 O00370 1275 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms