RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 AMIGO2Q86SJ2 522 aa4.01□□□□□ -1.77
VRK1-202ENST00000553683 KRT73Q86Y46 540 aa4.01□□□□□ -1.77
VRK1-202ENST00000553683 NGDNQ8NEJ9 315 aaKnown RBP4.01□□□□□ -1.77
VRK1-202ENST00000553683 DNAJB14Q8TBM8 379 aa4.01□□□□□ -1.77
VRK1-202ENST00000553683 CTHRC1Q96CG8 243 aa4.01□□□□□ -1.77
VRK1-202ENST00000553683 CCDC136Q96JN2 1154 aa4.01□□□□□ -1.77
VRK1-202ENST00000553683 SNX22Q96L94 193 aa4.01□□□□□ -1.77
VRK1-202ENST00000553683 STK31Q9BXU1 1019 aa4.01□□□□□ -1.77
VRK1-202ENST00000553683 EIF2AQ9BY44 585 aaKnown RBP4.01□□□□□ -1.77
VRK1-202ENST00000553683 TFCP2L1Q9NZI6 479 aa4.01□□□□□ -1.77
VRK1-202ENST00000553683 HDAC9Q9UKV0 1011 aa4.01□□□□□ -1.77
VRK1-202ENST00000553683 POC1B-GALNT4F8VUJ3 575 aa4□□□□□ -1.77
VRK1-202ENST00000553683 THAP12O43422 761 aa4□□□□□ -1.77
VRK1-202ENST00000553683 RGS10O43665 173 aa4□□□□□ -1.77
VRK1-202ENST00000553683 TMPRSS11DO60235 418 aa4□□□□□ -1.77
VRK1-202ENST00000553683 SRGAP2O75044 1071 aa4□□□□□ -1.77
VRK1-202ENST00000553683 PIAS2O75928 621 aa4□□□□□ -1.77
VRK1-202ENST00000553683 RASAL1O95294 804 aa4□□□□□ -1.77
VRK1-202ENST00000553683 FGAP02671 866 aa4□□□□□ -1.77
VRK1-202ENST00000553683 A1BGP04217 495 aa4□□□□□ -1.77
VRK1-202ENST00000553683 CDK4P11802 303 aa4□□□□□ -1.77
VRK1-202ENST00000553683 ZNF37AP17032 561 aaPredicted RBP4□□□□□ -1.77
VRK1-202ENST00000553683 ENGP17813 658 aa4□□□□□ -1.77
VRK1-202ENST00000553683 MTHFSP49914 203 aa4□□□□□ -1.77
VRK1-202ENST00000553683 GATMP50440 423 aa4□□□□□ -1.77
VRK1-202ENST00000553683 HTRA4P83105 476 aaPredicted RBP4□□□□□ -1.77
VRK1-202ENST00000553683 ST3GAL2Q16842 350 aa4□□□□□ -1.77
VRK1-202ENST00000553683 PTCHD3Q3KNS1 767 aa4□□□□□ -1.77
VRK1-202ENST00000553683 CACHD1Q5VU97 1274 aa4□□□□□ -1.77
VRK1-202ENST00000553683 PLAG1Q6DJT9 500 aa4□□□□□ -1.77
VRK1-202ENST00000553683 PTCHD4Q6ZW05 846 aa4□□□□□ -1.77
VRK1-202ENST00000553683 UNC13DQ70J99 1090 aa4□□□□□ -1.77
VRK1-202ENST00000553683 RNF44Q7L0R7 432 aa4□□□□□ -1.77
VRK1-202ENST00000553683 GALNT4Q8N4A0 578 aa4□□□□□ -1.77
VRK1-202ENST00000553683 VGLL2Q8N8G2 317 aa4□□□□□ -1.77
VRK1-202ENST00000553683 TERB1Q8NA31 727 aa4□□□□□ -1.77
VRK1-202ENST00000553683 DPF1Q92782 380 aa4□□□□□ -1.77
VRK1-202ENST00000553683 FAM227BQ96M60 508 aa4□□□□□ -1.77
VRK1-202ENST00000553683 LENG8Q96PV6 779 aaPredicted RBP4□□□□□ -1.77
VRK1-202ENST00000553683 FYTTD1Q96QD9 318 aaKnown RBP4□□□□□ -1.77
VRK1-202ENST00000553683 SNX15Q9NRS6 342 aa4□□□□□ -1.77
VRK1-202ENST00000553683 NKX1-2Q9UD57 310 aaPredicted RBP4□□□□□ -1.77
VRK1-202ENST00000553683 ZNF212Q9UDV6 495 aa4□□□□□ -1.77
VRK1-202ENST00000553683 MID2Q9UJV3 735 aa4□□□□□ -1.77
VRK1-202ENST00000553683 CCNL1Q9UK58 526 aaPredicted RBP4□□□□□ -1.77
VRK1-202ENST00000553683 ANO9A1A5B4 782 aa3.99□□□□□ -1.77
VRK1-202ENST00000553683 CGB1A6NKQ9 187 aa3.99□□□□□ -1.77
VRK1-202ENST00000553683 RHPN2P1A8MT19 583 aa3.99□□□□□ -1.77
VRK1-202ENST00000553683 UBE2Q2LH0YL09 131 aa3.99□□□□□ -1.77
VRK1-202ENST00000553683 H7C4K7 107 aa3.99□□□□□ -1.77
VRK1-202ENST00000553683 INO80B-WBP1J3KQ70 363 aa3.99□□□□□ -1.77
VRK1-202ENST00000553683 ADAMTS3O15072 1205 aa3.99□□□□□ -1.77
VRK1-202ENST00000553683 TUBB4AP04350 444 aa3.99□□□□□ -1.77
VRK1-202ENST00000553683 ERBB2P04626 1255 aa3.99□□□□□ -1.77
VRK1-202ENST00000553683 CELA2AP08217 269 aa3.99□□□□□ -1.77
VRK1-202ENST00000553683 PGDP52209 483 aa3.99□□□□□ -1.77
VRK1-202ENST00000553683 CYP4F2P78329 520 aa3.99□□□□□ -1.77
VRK1-202ENST00000553683 E2F1Q01094 437 aa3.99□□□□□ -1.77
VRK1-202ENST00000553683 GRM1Q13255 1194 aa3.99□□□□□ -1.77
VRK1-202ENST00000553683 SAFBQ15424 915 aaKnown RBP eCLIP3.99□□□□□ -1.77
VRK1-202ENST00000553683 LY6KQ17RY6 165 aa3.99□□□□□ -1.77
VRK1-202ENST00000553683 HSP90AB2PQ58FF8 381 aa3.99□□□□□ -1.77
VRK1-202ENST00000553683 KIRREL2Q6UWL6 708 aa3.99□□□□□ -1.77
VRK1-202ENST00000553683 CATSPERGQ6ZRH7 1159 aa3.99□□□□□ -1.77
VRK1-202ENST00000553683 ATP11CQ8NB49 1132 aa3.99□□□□□ -1.77
VRK1-202ENST00000553683 ADAMTS18Q8TE60 1221 aa3.99□□□□□ -1.77
VRK1-202ENST00000553683 TMEM171Q8WVE6 324 aa3.99□□□□□ -1.77
VRK1-202ENST00000553683 IQCDQ96DY2 449 aa3.99□□□□□ -1.77
VRK1-202ENST00000553683 PRR25Q96S07 402 aa3.99□□□□□ -1.77
VRK1-202ENST00000553683 RXFP3Q9NSD7 469 aa3.99□□□□□ -1.77
VRK1-202ENST00000553683 SH3BP4Q9P0V3 963 aa3.99□□□□□ -1.77
VRK1-202ENST00000553683 DNAJB11Q9UBS4 358 aa3.99□□□□□ -1.77
VRK1-202ENST00000553683 STEAP1Q9UHE8 339 aa3.99□□□□□ -1.77
VRK1-202ENST00000553683 COL15A1P39059 1388 aa3.99□□□□□ -1.77
VRK1-202ENST00000553683 MANSC4A6NHS7 340 aaPredicted RBP3.98□□□□□ -1.77
VRK1-202ENST00000553683 PRRT4C9JH25 899 aa3.98□□□□□ -1.77
VRK1-202ENST00000553683 H3BNC9 293 aa3.98□□□□□ -1.77
VRK1-202ENST00000553683 RAB27BO00194 218 aa3.98□□□□□ -1.77
VRK1-202ENST00000553683 KCNQ3O43525 872 aa3.98□□□□□ -1.77
VRK1-202ENST00000553683 SNX2O60749 519 aa3.98□□□□□ -1.77
VRK1-202ENST00000553683 USP1O94782 785 aa3.98□□□□□ -1.77
VRK1-202ENST00000553683 PARP1P09874 1014 aaKnown RBP3.98□□□□□ -1.77
VRK1-202ENST00000553683 CASP5P51878 434 aa3.98□□□□□ -1.77
VRK1-202ENST00000553683 SSBP2P81877 361 aaPredicted RBP3.98□□□□□ -1.77
VRK1-202ENST00000553683 ZNF543Q08ER8 600 aa3.98□□□□□ -1.77
VRK1-202ENST00000553683 IFIT5Q13325 482 aaKnown RBP3.98□□□□□ -1.77
VRK1-202ENST00000553683 CERKLQ49MI3 558 aaPredicted RBP3.98□□□□□ -1.77
VRK1-202ENST00000553683 L1TD1Q5T7N2 865 aaKnown RBP3.98□□□□□ -1.77
VRK1-202ENST00000553683 PRAMEF17Q5VTA0 474 aa3.98□□□□□ -1.77
VRK1-202ENST00000553683 BEND5Q7L4P6 421 aa3.98□□□□□ -1.77
VRK1-202ENST00000553683 DPP9Q86TI2 863 aa3.98□□□□□ -1.77
VRK1-202ENST00000553683 LINC01465Q8N7H1 131 aa3.98□□□□□ -1.77
VRK1-202ENST00000553683 PJA1Q8NG27 643 aa3.98□□□□□ -1.77
VRK1-202ENST00000553683 MBD3L2Q8NHZ7 208 aaPredicted RBP3.98□□□□□ -1.77
VRK1-202ENST00000553683 CYP2W1Q8TAV3 490 aa3.98□□□□□ -1.77
VRK1-202ENST00000553683 TIFAQ96CG3 184 aa3.98□□□□□ -1.77
VRK1-202ENST00000553683 ASB2Q96Q27 587 aa3.98□□□□□ -1.77
VRK1-202ENST00000553683 SELENOOQ9BVL4 669 aa3.98□□□□□ -1.77
VRK1-202ENST00000553683 ZBTB26Q9HCK0 441 aa3.98□□□□□ -1.77
VRK1-202ENST00000553683 VPS51Q9UID3 782 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms