RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 STXBP2Q15833 593 aa5.31□□□□□ -1.56
ATXN3-220ENST00000553491 CLUL1Q15846 466 aa5.31□□□□□ -1.56
ATXN3-220ENST00000553491 UGT8Q16880 541 aa5.31□□□□□ -1.56
ATXN3-220ENST00000553491 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.31□□□□□ -1.56
ATXN3-220ENST00000553491 SPATS1Q496A3 300 aa5.31□□□□□ -1.56
ATXN3-220ENST00000553491 TOR2AQ5JU69 321 aa5.31□□□□□ -1.56
ATXN3-220ENST00000553491 CPLX2Q6PUV4 134 aaKnown RBP5.31□□□□□ -1.56
ATXN3-220ENST00000553491 USP17L6PQ6QN14 398 aa5.31□□□□□ -1.56
ATXN3-220ENST00000553491 KCNK18Q7Z418 384 aa5.31□□□□□ -1.56
ATXN3-220ENST00000553491 LYSMD2Q8IV50 215 aa5.31□□□□□ -1.56
ATXN3-220ENST00000553491 FBXO16Q8IX29 292 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-220ENST00000553491 CHPFQ8IZ52 775 aa5.31□□□□□ -1.56
ATXN3-220ENST00000553491 CPA6Q8N4T0 437 aa5.31□□□□□ -1.56
ATXN3-220ENST00000553491 NECAB1Q8N987 351 aa5.31□□□□□ -1.56
ATXN3-220ENST00000553491 FAM133AQ8N9E0 248 aa5.31□□□□□ -1.56
ATXN3-220ENST00000553491 NSUN6Q8TEA1 469 aaKnown RBP5.31□□□□□ -1.56
ATXN3-220ENST00000553491 DIS3LQ8TF46 1054 aaKnown RBP5.31□□□□□ -1.56
ATXN3-220ENST00000553491 JPH3Q8WXH2 748 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-220ENST00000553491 PHKBQ93100 1093 aa5.31□□□□□ -1.56
ATXN3-220ENST00000553491 UIMC1Q96RL1 719 aa5.31□□□□□ -1.56
ATXN3-220ENST00000553491 MAP3K14Q99558 947 aa5.31□□□□□ -1.56
ATXN3-220ENST00000553491 HTATIP2Q9BUP3 242 aa5.31□□□□□ -1.56
ATXN3-220ENST00000553491 BTBD2Q9BX70 525 aa5.31□□□□□ -1.56
ATXN3-220ENST00000553491 C22orf23Q9BZE7 217 aa5.31□□□□□ -1.56
ATXN3-220ENST00000553491 WDR11Q9BZH6 1224 aa5.31□□□□□ -1.56
ATXN3-220ENST00000553491 QRSL1Q9H0R6 528 aaKnown RBP5.31□□□□□ -1.56
ATXN3-220ENST00000553491 C11orf49Q9H6J7 331 aa5.31□□□□□ -1.56
ATXN3-220ENST00000553491 PSTPIP2Q9H939 334 aa5.31□□□□□ -1.56
ATXN3-220ENST00000553491 ZNF180Q9UJW8 692 aa5.31□□□□□ -1.56
ATXN3-220ENST00000553491 SCN5AQ14524 2016 aa5.31□□□□□ -1.56
ATXN3-220ENST00000553491 MYH11P35749 1972 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-220ENST00000553491 LAMTOR5O43504 91 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 XPOTO43592 962 aaKnown RBP5.3□□□□□ -1.56
ATXN3-220ENST00000553491 B4GALT4O60513 344 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 PFKMP08237 780 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 TXNP10599 105 aaKnown RBP5.3□□□□□ -1.56
ATXN3-220ENST00000553491 CYBAP13498 195 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 SMARCA1P28370 1054 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 CCND2P30279 289 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 MAGEA10P43363 369 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-220ENST00000553491 RECQLP46063 649 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-220ENST00000553491 MTNR1BP49286 362 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 RGS19P49795 217 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 AK2P54819 239 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 NLRP5P59047 1200 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 IL13RA1P78552 427 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 TOB2Q14106 344 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-220ENST00000553491 TRIM25Q14258 630 aaKnown RBP5.3□□□□□ -1.56
ATXN3-220ENST00000553491 ANKRD1Q15327 319 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 SURF1Q15526 300 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 UBE2SQ16763 222 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 LY6KQ17RY6 165 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 SLC35G1Q2M3R5 365 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 TMEM63BQ5T3F8 832 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 MAP3K21Q5TCX8 1036 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 JAKMIP3Q5VZ66 844 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 MAMDC4Q6UXC1 1216 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 TMTC3Q6ZXV5 915 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 LIMS2Q7Z4I7 341 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 SGMS1Q86VZ5 419 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 SLC41A1Q8IVJ1 513 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 MSL3Q8N5Y2 521 aaKnown RBP5.3□□□□□ -1.56
ATXN3-220ENST00000553491 DNERQ8NFT8 737 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 OR6J1Q8NGC5 347 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 CALML6Q8TD86 181 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 JADE3Q92613 823 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 SAMD11Q96NU1 681 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 SPZ1Q9BXG8 430 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 TM6SF1Q9BZW5 370 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 WNT8AQ9H1J5 351 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 MEGF9Q9H1U4 602 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 OR10A5Q9H207 317 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 BARX1Q9HBU1 254 aaPredicted RBP5.3□□□□□ -1.56
ATXN3-220ENST00000553491 TCF7L1Q9HCS4 588 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 COL20A1Q9P218 1284 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 ATP11BQ9Y2G3 1177 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 ZDHHC9Q9Y397 364 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 NR2E3Q9Y5X4 410 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 MRFAP1Q9Y605 127 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 NUMBLQ9Y6R0 609 aa5.3□□□□□ -1.56
ATXN3-220ENST00000553491 LRRC37A2A6NM11 1700 aa5.29□□□□□ -1.56
ATXN3-220ENST00000553491 GBF1Q92538 1859 aa5.29□□□□□ -1.56
ATXN3-220ENST00000553491 H0Y858 1186 aa5.29□□□□□ -1.56
ATXN3-220ENST00000553491 GPR42O15529 346 aa5.29□□□□□ -1.56
ATXN3-220ENST00000553491 PRPF3O43395 683 aaKnown RBP5.29□□□□□ -1.56
ATXN3-220ENST00000553491 EPB41L2O43491 1005 aaKnown RBP5.29□□□□□ -1.56
ATXN3-220ENST00000553491 DUSP11O75319 330 aaKnown RBP5.29□□□□□ -1.56
ATXN3-220ENST00000553491 RFPL1O75677 317 aa5.29□□□□□ -1.56
ATXN3-220ENST00000553491 EIF3JO75822 258 aaKnown RBP5.29□□□□□ -1.56
ATXN3-220ENST00000553491 PCDH8O95206 1070 aa5.29□□□□□ -1.56
ATXN3-220ENST00000553491 CNOT4O95628 575 aaKnown RBP5.29□□□□□ -1.56
ATXN3-220ENST00000553491 ADRB1P08588 477 aa5.29□□□□□ -1.56
ATXN3-220ENST00000553491 AGXTP21549 392 aa5.29□□□□□ -1.56
ATXN3-220ENST00000553491 APEX1P27695 318 aaKnown RBP5.29□□□□□ -1.56
ATXN3-220ENST00000553491 ADCY7P51828 1080 aa5.29□□□□□ -1.56
ATXN3-220ENST00000553491 MRPS9P82933 396 aaKnown RBP5.29□□□□□ -1.56
ATXN3-220ENST00000553491 SP4Q02446 784 aa5.29□□□□□ -1.56
ATXN3-220ENST00000553491 TOP3AQ13472 1001 aaPredicted RBP5.29□□□□□ -1.56
ATXN3-220ENST00000553491 ACAP2Q15057 778 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms