RNA–Protein interactions for RNA: ENST00000553353.5

FOXN3-203, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-203ENST00000553353 FOXS1O43638 330 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 PRDM1O75626 825 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 RFPL2O75678 378 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 EIF3JO75822 258 aaKnown RBP3.86□□□□□ -1.79
FOXN3-203ENST00000553353 ZNF202O95125 648 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 MBD4O95243 580 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 CXCL14O95715 111 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 CTSAP10619 480 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 TCF3P15923 654 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 COMTP21964 271 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 ADD2P35612 726 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 SLC16A2P36021 539 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 SLC1A4P43007 532 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 FNTBP49356 437 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 ADCY1Q08828 1119 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 SCAPQ12770 1279 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 UBXN2BQ14CS0 331 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 NONOQ15233 471 aaKnown RBP eCLIP3.86□□□□□ -1.79
FOXN3-203ENST00000553353 NRN1LQ496H8 165 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 VASNQ6EMK4 673 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 TAF2Q6P1X5 1199 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 PIP4P1Q86T03 277 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 REXO1L1PQ8IX06 675 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 DTX3Q8N9I9 347 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 LSM14AQ8ND56 463 aaKnown RBP3.86□□□□□ -1.79
FOXN3-203ENST00000553353 RCBTB1Q8NDN9 531 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 NUDT10Q8NFP7 164 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 DNAJB3Q8WWF6 145 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 GLG1Q92896 1179 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 PPP1R14AQ96A00 147 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 GPRASP2Q96D09 838 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 NUDT11Q96G61 164 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 SPATA33Q96N06 139 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 GNRHR2Q96P88 292 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 IWS1Q96ST2 819 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 FTHL17Q9BXU8 183 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 MAF1Q9H063 256 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 CLMPQ9H6B4 373 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 RGS18Q9NS28 235 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 SPG21Q9NZD8 308 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 PUF60Q9UHX1 559 aaKnown RBP3.86□□□□□ -1.79
FOXN3-203ENST00000553353 TMEFF2Q9UIK5 374 aaPredicted RBP3.86□□□□□ -1.79
FOXN3-203ENST00000553353 RAB23Q9ULC3 237 aa3.86□□□□□ -1.79
FOXN3-203ENST00000553353 CTDP1Q9Y5B0 961 aaPredicted RBP3.86□□□□□ -1.79
FOXN3-203ENST00000553353 FBN3Q75N90 2809 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 LNP1A1A4G5 178 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 GOLGA6L3A6NEY3 463 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 MAFGO15525 162 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 FBXO21O94952 628 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 GGPS1O95749 300 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 KNG1P01042 644 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 SNRPB2P08579 225 aaKnown RBP3.85□□□□□ -1.79
FOXN3-203ENST00000553353 CNPP09543 421 aaKnown RBP3.85□□□□□ -1.79
FOXN3-203ENST00000553353 CHRNB1P11230 501 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 XRCC6P12956 609 aaKnown RBP eCLIP3.85□□□□□ -1.79
FOXN3-203ENST00000553353 ZNF16P17020 682 aaPredicted RBP3.85□□□□□ -1.79
FOXN3-203ENST00000553353 PPM1AP35813 382 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 CCR10P46092 362 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 POLGP54098 1239 aaPredicted RBP3.85□□□□□ -1.79
FOXN3-203ENST00000553353 FAM193AP78312 1265 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 MRPS6P82932 125 aaKnown RBP3.85□□□□□ -1.79
FOXN3-203ENST00000553353 PTH1RQ03431 593 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 STXBP2Q15833 593 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 ZNF568Q3ZCX4 644 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 USP39Q53GS9 565 aaKnown RBP3.85□□□□□ -1.79
FOXN3-203ENST00000553353 CLLU1OSQ5K130 101 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 CYP26C1Q6V0L0 522 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 SLC24A5Q71RS6 500 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 KBTBD6Q86V97 674 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 LONP2Q86WA8 852 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 TMC8Q8IU68 726 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 VPS52Q8N1B4 723 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 IL31RAQ8NI17 732 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 SSH3Q8TE77 659 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 NSUN6Q8TEA1 469 aaKnown RBP3.85□□□□□ -1.79
FOXN3-203ENST00000553353 CPLX3Q8WVH0 158 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 SREK1Q8WXA9 508 aaKnown RBP3.85□□□□□ -1.79
FOXN3-203ENST00000553353 ZC3H10Q96K80 434 aaKnown RBP3.85□□□□□ -1.79
FOXN3-203ENST00000553353 ZNF558Q96NG5 402 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 NELL2Q99435 816 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 TRIM8Q9BZR9 551 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 TMEM117Q9H0C3 514 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 PUS7LQ9H0K6 701 aaKnown RBP3.85□□□□□ -1.79
FOXN3-203ENST00000553353 CSRNP2Q9H175 543 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 PRORYQ9H606 182 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 ELAC1Q9H777 363 aaKnown RBP3.85□□□□□ -1.79
FOXN3-203ENST00000553353 PRDM16Q9HAZ2 1276 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 RRAGDQ9NQL2 400 aaPredicted RBP3.85□□□□□ -1.79
FOXN3-203ENST00000553353 TMEM161AQ9NX61 479 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 ASH2LQ9UBL3 628 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 PCDHGA5Q9Y5G8 931 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 PCDHA2Q9Y5H9 948 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 MYO10Q9HD67 2058 aa3.85□□□□□ -1.79
FOXN3-203ENST00000553353 SPTAN1Q13813 2472 aaKnown RBP3.84□□□□□ -1.79
FOXN3-203ENST00000553353 DENND4AQ7Z401 1863 aa3.84□□□□□ -1.79
FOXN3-203ENST00000553353 CCDC195A0A1B0GUA6 201 aa3.84□□□□□ -1.79
FOXN3-203ENST00000553353 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.84□□□□□ -1.79
FOXN3-203ENST00000553353 NT5C1B-RDH14C9J2C7 533 aa3.84□□□□□ -1.79
FOXN3-203ENST00000553353 PYCARD-AS1I3L0S3 204 aa3.84□□□□□ -1.79
FOXN3-203ENST00000553353 FOXP2O15409 715 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms