RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 COCHO43405 550 aa20.38■□□□□ 0.85
PTCH1-227ENST00000553256 GREM1O60565 184 aa20.38■□□□□ 0.85
PTCH1-227ENST00000553256 AFPP02771 609 aaKnown RBP20.38■□□□□ 0.85
PTCH1-227ENST00000553256 ARSAP15289 507 aa20.38■□□□□ 0.85
PTCH1-227ENST00000553256 ERCC5P28715 1186 aaPredicted RBP20.38■□□□□ 0.85
PTCH1-227ENST00000553256 HOXD11P31277 338 aaPredicted RBP20.38■□□□□ 0.85
PTCH1-227ENST00000553256 GCNT1Q02742 428 aa20.38■□□□□ 0.85
PTCH1-227ENST00000553256 LRMPQ12912 555 aa20.38■□□□□ 0.85
PTCH1-227ENST00000553256 GAS6Q14393 721 aa20.38■□□□□ 0.85
PTCH1-227ENST00000553256 UBXN2BQ14CS0 331 aa20.38■□□□□ 0.85
PTCH1-227ENST00000553256 ANGPT1Q15389 498 aa20.38■□□□□ 0.85
PTCH1-227ENST00000553256 GAB4Q2WGN9 574 aa20.38■□□□□ 0.85
PTCH1-227ENST00000553256 EML3Q32P44 896 aa20.38■□□□□ 0.85
PTCH1-227ENST00000553256 DPY19L2P1Q6NXN4 242 aa20.38■□□□□ 0.85
PTCH1-227ENST00000553256 CNOT6LQ96LI5 555 aaKnown RBP20.38■□□□□ 0.85
PTCH1-227ENST00000553256 HEXIM2Q96MH2 286 aaKnown RBP20.38■□□□□ 0.85
PTCH1-227ENST00000553256 EBF3Q9H4W6 596 aa20.38■□□□□ 0.85
PTCH1-227ENST00000553256 NMUR1Q9HB89 426 aa20.38■□□□□ 0.85
PTCH1-227ENST00000553256 THG1LQ9NWX6 298 aaKnown RBP20.38■□□□□ 0.85
PTCH1-227ENST00000553256 PROB1E7EW31 1015 aa20.37■□□□□ 0.85
PTCH1-227ENST00000553256 LEFTY2O00292 366 aa20.37■□□□□ 0.85
PTCH1-227ENST00000553256 STK25O00506 426 aa20.37■□□□□ 0.85
PTCH1-227ENST00000553256 TBXAS1P24557 533 aaPredicted RBP20.37■□□□□ 0.85
PTCH1-227ENST00000553256 MAGEA9P43362 315 aa20.37■□□□□ 0.85
PTCH1-227ENST00000553256 PDE6CP51160 858 aa20.37■□□□□ 0.85
PTCH1-227ENST00000553256 RUNX3Q13761 415 aa20.37■□□□□ 0.85
PTCH1-227ENST00000553256 PDGFRLQ15198 375 aa20.37■□□□□ 0.85
PTCH1-227ENST00000553256 ITPRIPL2Q3MIP1 535 aa20.37■□□□□ 0.85
PTCH1-227ENST00000553256 C1orf228Q6PIY5 440 aa20.37■□□□□ 0.85
PTCH1-227ENST00000553256 BHLHA9Q7RTU4 235 aa20.37■□□□□ 0.85
PTCH1-227ENST00000553256 SCD5Q86SK9 330 aa20.37■□□□□ 0.85
PTCH1-227ENST00000553256 C1orf210Q8IVY1 113 aa20.37■□□□□ 0.85
PTCH1-227ENST00000553256 ANKRD52Q8NB46 1076 aa20.37■□□□□ 0.85
PTCH1-227ENST00000553256 TFAP2BQ92481 460 aa20.37■□□□□ 0.85
PTCH1-227ENST00000553256 NT5C1BQ96P26 610 aa20.37■□□□□ 0.85
PTCH1-227ENST00000553256 LINC00597Q9H2U6 94 aa20.37■□□□□ 0.85
PTCH1-227ENST00000553256 CHRDQ9H2X0 955 aa20.37■□□□□ 0.85
PTCH1-227ENST00000553256 CCSER2Q9H7U1 834 aa20.37■□□□□ 0.85
PTCH1-227ENST00000553256 CYLDQ9NQC7 956 aa20.37■□□□□ 0.85
PTCH1-227ENST00000553256 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.37■□□□□ 0.85
PTCH1-227ENST00000553256 TULP2O00295 520 aa20.36■□□□□ 0.85
PTCH1-227ENST00000553256 O00370 1275 aa20.36■□□□□ 0.85
PTCH1-227ENST00000553256 GABBR2O75899 941 aa20.36■□□□□ 0.85
PTCH1-227ENST00000553256 CCDC192P0DO97 292 aa20.36■□□□□ 0.85
PTCH1-227ENST00000553256 TDGF1P13385 188 aa20.36■□□□□ 0.85
PTCH1-227ENST00000553256 NBL1P41271 181 aa20.36■□□□□ 0.85
PTCH1-227ENST00000553256 IFRD2Q12894 506 aaPredicted RBP20.36■□□□□ 0.85
PTCH1-227ENST00000553256 CCINQ13939 588 aa20.36■□□□□ 0.85
PTCH1-227ENST00000553256 CCDC186Q7Z3E2 898 aa20.36■□□□□ 0.85
PTCH1-227ENST00000553256 ZNF276Q8N554 614 aa20.36■□□□□ 0.85
PTCH1-227ENST00000553256 TTC8Q8TAM2 541 aa20.36■□□□□ 0.85
PTCH1-227ENST00000553256 CSGALNACT1Q8TDX6 532 aa20.36■□□□□ 0.85
PTCH1-227ENST00000553256 NELL1Q92832 810 aa20.36■□□□□ 0.85
PTCH1-227ENST00000553256 WBP2Q969T9 261 aa20.36■□□□□ 0.85
PTCH1-227ENST00000553256 GBP4Q96PP9 640 aa20.36■□□□□ 0.85
PTCH1-227ENST00000553256 INTS2Q9H0H0 1204 aaKnown RBP20.36■□□□□ 0.85
PTCH1-227ENST00000553256 FBXO44Q9H4M3 255 aa20.36■□□□□ 0.85
PTCH1-227ENST00000553256 MRPS17Q9Y2R5 130 aaKnown RBP20.36■□□□□ 0.85
PTCH1-227ENST00000553256 CPQQ9Y646 472 aa20.36■□□□□ 0.85
PTCH1-227ENST00000553256 WNT6Q9Y6F9 365 aa20.36■□□□□ 0.85
PTCH1-227ENST00000553256 CYP26A1O43174 497 aa20.35■□□□□ 0.85
PTCH1-227ENST00000553256 FGFR1OPO95684 399 aaKnown RBP20.35■□□□□ 0.85
PTCH1-227ENST00000553256 CT47A1Q5JQC4 288 aaPredicted RBP20.35■□□□□ 0.85
PTCH1-227ENST00000553256 HECTD3Q5T447 861 aa20.35■□□□□ 0.85
PTCH1-227ENST00000553256 NAIF1Q69YI7 327 aaPredicted RBP20.35■□□□□ 0.85
PTCH1-227ENST00000553256 PIGZQ86VD9 579 aa20.35■□□□□ 0.85
PTCH1-227ENST00000553256 THAP9Q9H5L6 903 aa20.35■□□□□ 0.85
PTCH1-227ENST00000553256 ECT2Q9H8V3 914 aa20.35■□□□□ 0.85
PTCH1-227ENST00000553256 FBRSL1Q9HCM7 1045 aaKnown RBP20.35■□□□□ 0.85
PTCH1-227ENST00000553256 PRMT8Q9NR22 394 aaPredicted RBP20.35■□□□□ 0.85
PTCH1-227ENST00000553256 FAM86C1Q9NVL1 165 aa20.35■□□□□ 0.85
PTCH1-227ENST00000553256 ZFHX2Q9C0A1 2572 aaPredicted RBP20.34■□□□□ 0.85
PTCH1-227ENST00000553256 TRDMT1O14717 391 aaKnown RBP20.34■□□□□ 0.85
PTCH1-227ENST00000553256 PAEPP09466 180 aa20.34■□□□□ 0.85
PTCH1-227ENST00000553256 GJA4P35212 333 aa20.34■□□□□ 0.85
PTCH1-227ENST00000553256 TMEM196Q5HYL7 178 aa20.34■□□□□ 0.85
PTCH1-227ENST00000553256 MIIPQ5JXC2 388 aa20.34■□□□□ 0.85
PTCH1-227ENST00000553256 PM20D1Q6GTS8 502 aa20.34■□□□□ 0.85
PTCH1-227ENST00000553256 RRAGAQ7L523 313 aa20.34■□□□□ 0.85
PTCH1-227ENST00000553256 EZH1Q92800 747 aaPredicted RBP20.34■□□□□ 0.85
PTCH1-227ENST00000553256 IRF2BPLQ9H1B7 796 aa20.34■□□□□ 0.85
PTCH1-227ENST00000553256 LMAN1LQ9HAT1 526 aa20.34■□□□□ 0.85
PTCH1-227ENST00000553256 DUS2Q9NX74 493 aaKnown RBP20.34■□□□□ 0.85
PTCH1-227ENST00000553256 TSPAN16Q9UKR8 245 aa20.34■□□□□ 0.85
PTCH1-227ENST00000553256 KIAA1257Q9ULG3 409 aa20.34■□□□□ 0.85
PTCH1-227ENST00000553256 NDRG2Q9UN36 371 aaKnown RBP20.34■□□□□ 0.85
PTCH1-227ENST00000553256 GTPBP10A4D1E9 387 aaKnown RBP20.33■□□□□ 0.85
PTCH1-227ENST00000553256 TBX18O95935 607 aa20.33■□□□□ 0.85
PTCH1-227ENST00000553256 CHRM1P11229 460 aaPredicted RBP20.33■□□□□ 0.85
PTCH1-227ENST00000553256 VDRP11473 427 aa20.33■□□□□ 0.85
PTCH1-227ENST00000553256 RFX1P22670 979 aa20.33■□□□□ 0.85
PTCH1-227ENST00000553256 KPNA1P52294 538 aaPredicted RBP20.33■□□□□ 0.85
PTCH1-227ENST00000553256 YWHAEP62258 255 aaKnown RBP20.33■□□□□ 0.85
PTCH1-227ENST00000553256 PDE4CQ08493 712 aa20.33■□□□□ 0.85
PTCH1-227ENST00000553256 MTAPQ13126 283 aa20.33■□□□□ 0.85
PTCH1-227ENST00000553256 FSTL4Q6MZW2 842 aa20.33■□□□□ 0.85
PTCH1-227ENST00000553256 KLHDC10Q6PID8 442 aa20.33■□□□□ 0.85
PTCH1-227ENST00000553256 TRIM65Q6PJ69 517 aa20.33■□□□□ 0.85
PTCH1-227ENST00000553256 TMEM270Q6UE05 265 aa20.33■□□□□ 0.85
PTCH1-227ENST00000553256 LCLAT1Q6UWP7 414 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms