RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 ADH1CP00326 375 aa12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 ADH5P11766 374 aa12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 NDUFV2P19404 249 aa12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 SCP2P22307 547 aa12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 ACAT1P24752 427 aaKnown RBP12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 NTSR1P30989 418 aa12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 MLLT3P42568 568 aaPredicted RBP12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 ABCG1P45844 678 aa12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 TRAPPC10P48553 1259 aa12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 ACOT2P49753 483 aa12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 USP46P62068 366 aa12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 GUCY1B3Q02153 619 aa12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 PPP1R15BQ5SWA1 713 aa12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 KRT79Q5XKE5 535 aa12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 FAM171BQ6P995 826 aa12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 TRMT11Q7Z4G4 463 aaKnown RBP12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 ZNF605Q86T29 641 aa12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 OSTM1Q86WC4 334 aa12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 MIB1Q86YT6 1006 aa12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 CCDC83Q8IWF9 413 aa12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 GALNT15Q8N3T1 639 aa12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 PDCD7Q8N8D1 485 aaKnown RBP12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 ZNF513Q8N8E2 541 aaPredicted RBP12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 CEP295NLQ96MC4 621 aa12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 PNMA5Q96PV4 448 aa12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 RAB34Q9BZG1 259 aa12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 IL21RQ9HBE5 538 aa12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 DDX43Q9NXZ2 648 aaKnown RBP12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 KCND2Q9NZV8 630 aa12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 CYP8B1Q9UNU6 501 aa12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 LIMCH1Q9UPQ0 1083 aa12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 PCDHGB2Q9Y5G2 931 aa12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 CPQQ9Y646 472 aa12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 STYXL1Q9Y6J8 313 aa12.16□□□□□ -0.46
SUPT16H-202ENST00000552829 NPHP3-ACAD11A0A0J9YXS1 232 aa12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 A0A1B0GTW7 788 aa12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 ZNF840PA6NDX5 716 aa12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 ANKRD63C9JTQ0 380 aa12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 HOXC11O43248 304 aaPredicted RBP12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 GABBR2O75899 941 aa12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 OAS1P00973 400 aaKnown RBP12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 HOXB2P14652 356 aa12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 GNSP15586 552 aa12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 MAOBP27338 520 aa12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 ITPKBP27987 946 aa12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 TOB1P50616 345 aaPredicted RBP12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 ST3GAL1Q11201 340 aa12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 SMAD1Q15797 465 aaKnown RBP12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 LY6G5CQ5SRR4 150 aa12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 SYCP2LQ5T4T6 812 aa12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 SCARA3Q6AZY7 606 aa12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 CRELD2Q6UXH1 353 aaPredicted RBP12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 LIMS2Q7Z4I7 341 aa12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 SCN4BQ8IWT1 228 aa12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 RGL4Q8IZJ4 473 aa12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 TMEM86AQ8N2M4 240 aa12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 KCTD17Q8N5Z5 321 aa12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 CXorf38Q8TB03 319 aa12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 IPO4Q8TEX9 1081 aaKnown RBP12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 FOXJ1Q92949 421 aa12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 ZNF560Q96MR9 790 aa12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 CDC6Q99741 560 aa12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 DUSP9Q99956 384 aaKnown RBP12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 CD93Q9NPY3 652 aa12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 GDAP2Q9NXN4 497 aa12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 TRPM5Q9NZQ8 1165 aa12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 CFAP97Q9P2B7 532 aa12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 FNDC3AQ9Y2H6 1198 aaKnown RBP12.15□□□□□ -0.46
SUPT16H-202ENST00000552829 TMEM131Q92545 1883 aa12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 NUMA1Q14980 2115 aa12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 MYLKQ15746 1914 aa12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 E2F8A0AVK6 867 aa12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 TBC1D3BA6NDS4 549 aa12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 SCAMP3O14828 347 aaKnown RBP12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 HCRTO43612 131 aa12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 CILPO75339 1184 aa12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 TULP3O75386 442 aa12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 CD44P16070 742 aaKnown RBP12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 PNPLA4P41247 253 aa12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 PPP3CCP48454 512 aa12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 ZNF131P52739 623 aa12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 MYL7Q01449 175 aa12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 CUL4AQ13619 759 aa12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 ANKRD1Q15327 319 aa12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 PTPRNQ16849 979 aa12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 WDR45BQ5MNZ6 344 aa12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 VSTM1Q6UX27 236 aa12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 NT5DC4Q86YG4 428 aa12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 SPATA2LQ8IUW3 424 aaPredicted RBP12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 TERB1Q8NA31 727 aa12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 C1orf216Q8TAB5 229 aa12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 PIP4K2CQ8TBX8 421 aa12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 SETD7Q8WTS6 366 aaKnown RBP12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 OTUB2Q96DC9 234 aa12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 ZSCAN31Q96LW9 406 aaPredicted RBP12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 FIZ1Q96SL8 496 aa12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 ACOX2Q99424 681 aa12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 GABRG3Q99928 467 aa12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 TM7SF3Q9NS93 570 aa12.14□□□□□ -0.47
SUPT16H-202ENST00000552829 SMPD4Q9NXE4 827 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms