RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 ATXN2LQ8WWM7 1075 aaKnown RBP6.35□□□□□ -1.39
CHMP4A-210ENST00000552620 PSPC1Q8WXF1 523 aaKnown RBP6.35□□□□□ -1.39
CHMP4A-210ENST00000552620 CLEC4DQ8WXI8 215 aa6.35□□□□□ -1.39
CHMP4A-210ENST00000552620 EZH1Q92800 747 aaPredicted RBP6.35□□□□□ -1.39
CHMP4A-210ENST00000552620 UTP4Q969X6 686 aaKnown RBP6.35□□□□□ -1.39
CHMP4A-210ENST00000552620 PPP1R14AQ96A00 147 aa6.35□□□□□ -1.39
CHMP4A-210ENST00000552620 C18orf8Q96DM3 657 aa6.35□□□□□ -1.39
CHMP4A-210ENST00000552620 FBXL18Q96ME1 805 aa6.35□□□□□ -1.39
CHMP4A-210ENST00000552620 KREMEN1Q96MU8 473 aa6.35□□□□□ -1.39
CHMP4A-210ENST00000552620 SELENOSQ9BQE4 189 aa6.35□□□□□ -1.39
CHMP4A-210ENST00000552620 SENP7Q9BQF6 1050 aa6.35□□□□□ -1.39
CHMP4A-210ENST00000552620 CBWD1Q9BRT8 395 aa6.35□□□□□ -1.39
CHMP4A-210ENST00000552620 ASPNQ9BXN1 380 aa6.35□□□□□ -1.39
CHMP4A-210ENST00000552620 MAF1Q9H063 256 aa6.35□□□□□ -1.39
CHMP4A-210ENST00000552620 VPS33BQ9H267 617 aa6.35□□□□□ -1.39
CHMP4A-210ENST00000552620 IKZF4Q9H2S9 585 aa6.35□□□□□ -1.39
CHMP4A-210ENST00000552620 ADAM7Q9H2U9 754 aa6.35□□□□□ -1.39
CHMP4A-210ENST00000552620 SEMA4AQ9H3S1 761 aa6.35□□□□□ -1.39
CHMP4A-210ENST00000552620 PCIF1Q9H4Z3 704 aa6.35□□□□□ -1.39
CHMP4A-210ENST00000552620 AZI2Q9H6S1 392 aa6.35□□□□□ -1.39
CHMP4A-210ENST00000552620 SPC25Q9HBM1 224 aa6.35□□□□□ -1.39
CHMP4A-210ENST00000552620 KIAA1586Q9HCI6 787 aa6.35□□□□□ -1.39
CHMP4A-210ENST00000552620 SLC40A1Q9NP59 571 aa6.35□□□□□ -1.39
CHMP4A-210ENST00000552620 RAB20Q9NX57 234 aa6.35□□□□□ -1.39
CHMP4A-210ENST00000552620 ZNF70Q9UC06 446 aaPredicted RBP6.35□□□□□ -1.39
CHMP4A-210ENST00000552620 TCEAL9Q9UHQ7 104 aa6.35□□□□□ -1.39
CHMP4A-210ENST00000552620 CCPG1Q9ULG6 757 aa6.35□□□□□ -1.39
CHMP4A-210ENST00000552620 TBX20Q9UMR3 447 aa6.35□□□□□ -1.39
CHMP4A-210ENST00000552620 WDR64B1ANS9 1081 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 TCP10L2B9ZVM9 353 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 DNM1LO00429 736 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 NDC80O14777 642 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 WDR46O15213 610 aaKnown RBP6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 MAFGO15525 162 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 DNAJC6O75061 913 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 PPM1BO75688 479 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 GAS8O95995 478 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 ASNSP08243 561 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 MMEP08473 750 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 TAL1P17542 331 aaPredicted RBP6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 MAPK4P31152 587 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 SLC8A1P32418 973 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 CETN2P41208 172 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 PEX3P56589 373 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 RTP1P59025 263 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 UBXN2AP68543 259 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 IFI35P80217 286 aaPredicted RBP6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 AUHQ13825 339 aaKnown RBP6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 PTK6Q13882 451 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 PPP1R7Q15435 360 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 SNCBQ16143 134 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 CNGA2Q16280 664 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 SNRNP35Q16560 246 aaKnown RBP6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 CCNG2Q16589 344 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 CLEC16AQ2KHT3 1053 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 PREPLQ4J6C6 727 aaPredicted RBP6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 SGO2Q562F6 1265 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 XKR9Q5GH70 373 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 NBPF12Q5TAG4 269 aaPredicted RBP6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 LIN9Q5TKA1 542 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 TTC27Q6P3X3 843 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 RHBDF2Q6PJF5 856 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 SLC30A10Q6XR72 485 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 TRIM72Q6ZMU5 477 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 RNF207Q6ZRF8 634 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 ZDHHC14Q8IZN3 488 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 FUKQ8N0W3 1084 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 PPM1KQ8N3J5 372 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 GBP7Q8N8V2 638 aaPredicted RBP6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 TMEM161BQ8NDZ6 487 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 FBXL13Q8NEE6 735 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 DNAJB8Q8NHS0 232 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 MDM1Q8TC05 714 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 PLEKHO2Q8TD55 490 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 PARD3BQ8TEW8 1205 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 RNF141Q8WVD5 230 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 DDX1Q92499 740 aaKnown RBP6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 LPAR1Q92633 364 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 KCNN1Q92952 543 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 ZNF653Q96CK0 615 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 SNF8Q96H20 258 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 VCPIP1Q96JH7 1222 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 CDC6Q99741 560 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 NCAPGQ9BPX3 1015 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 CCDC77Q9BR77 488 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 KLHL25Q9H0H3 589 aa6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.34□□□□□ -1.39
CHMP4A-210ENST00000552620 ADAMTSL1Q8N6G6 1762 aa6.34□□□□□ -1.4
CHMP4A-210ENST00000552620 hCG_2014768A0A024R1R8 64 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 TRAV20A0A0B4J274 112 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 A0A1B0GUA9 196 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 FAM95CA0A1B0GW59 222 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 DDX39AO00148 427 aaKnown RBP6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 NOP56O00567 594 aaKnown RBP6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 SLC16A4O15374 487 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 ADCY3O60266 1144 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 MGRN1O60291 552 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 SLITRK5O94991 958 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 ASMTLO95671 621 aa6.33□□□□□ -1.4
CHMP4A-210ENST00000552620 TTC4O95801 387 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms